| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is porA [H]
Identifier: 51894397
GI number: 51894397
Start: 3481634
End: 3483901
Strand: Reverse
Name: porA [H]
Synonym: STH3262
Alternate gene names: 51894397
Gene position: 3483901-3481634 (Counterclockwise)
Preceding gene: 51894398
Following gene: 51894396
Centisome position: 97.69
GC content: 67.06
Gene sequence:
>2268_bases ATGGCACTGAAAGAGGAGCACCTGAGGGTTCAGAAGACCACGTTCAAGTCGGGCAATGAGATGGCCGCGCTGGCCGCAAG CCAGATCAACTTCCACCTGATGGGCTACTATCCCATCACGCCGTCCACCGAGATCGCCGAGTTCATCGACGAGATGCGGG TGGAGGGCGAGAACAACATCGTGATGATCGCCGGCGACGGCGAGCACGGCGCGGCGGGCATCTGCTACGGCGCGGCCGTG GCCGGCGGCCGGGTGTTCAACGCCACCTCGGCCAACGGCTACCTGTACGCCCTGGAGCAGATGCCGGTACAGTCGGGCAC CCGCATGCCCATGGTGATGGATCTGGTCACCCGGTCGGTCTCCGGGCCGCTGGACATCCGCGGCGACCACTCCGATCTCT ACTTTGCCCTGAACACGGGCTGGATCATCCTGTACGCGAACAACCCGCAGGAGGTCTACGACCTGCATCCCATTGCGGTC CGGGTCGGCGAGCACCCCGACGTGCGGCTGCCCGTGATCGTCGGCTTCGACGGCTTCTTCACCAGCCACCAGAAGCGGCG GGTCTCCTATTTCGAGGATCCGAAGGTGCTGCAGGAGTTCGTGGGGCCGCAGCCCGAGGGCTTCCCCCACGCCCTGGATC CCCGCAACCCGCAGACCTTCGGCCCGTATATGAACGATCCTGACCTGATCAACAACAAGTACCAGCTGCACCTGGCCATG GAGGCCGCCCGCCGGGTGATCCCCGAGATCTTCGCCGAGTGGGAGCGGATCTCCGGGCGCCGGCTGGAGATGGTCGAGGC GTACCGCATGGAGGACGCCGACGTCGCGCTGGTGCTCCTGGGCTCCGCGGCGGACACCGGCAAGCAGGTGGCCGACAAGC TGCGGGAGCAGGGCGTGCGCGCCGGCGTGGTGACCCTGCACGTGCTGCGGCCCTTCCCGGCGGCGGAGATCCGGCAGGTC CTGCGTGGCGTGTCCGCGGTGGTCATCGGGGAGCGGGCCGACTCCTACGGCTCGGGCGGCGGCAACCTCTCCCACGAGAT CAAGTCCGCGCTGAAGGACGACCCGGACAACCGCACCCTCGTGGCCACCCGCATCTACGGCCTGGGCGGCAAGGACTTCT ACCCGGCGGACGCCGAGGCGTTCTACGAGCTGGCCCTGGAGATGGCCCGCACCGGCCGGGTGGAAGTGCCCTTCGACTAC CACGGCACCACCGCGGCCACCGAGACGCAGCCGCTGGAGGTGGTGCGGCCGCTGACCCGCGAGGAGCAGCAGTCGCCGGT GAAGGTCGAGGTCGTGGGTGACGAGCTGAAGGTCACCGTGCCGCCTCCCCGCCAGATGATGGGGATGCCCAAGCGCATCA CGCCGGGCCACGGCGCCTGCCCGGGCTGCGGCATCTTCCCGGCCCTCGACAACTTCTTCCGGGCGCTCTCCGGTGACGTG GTGGTGCTCTTCCAGACCGGGTGCGCGATGGTGGTCACCACGGGCTACCCCTACTCGGCCCACCGGGTCACCTATATCCA CAACCTGTTCCAGAACGGCGCCGCCACCCTCTCGGGTGTCGTGGAGATGTTCTACGAGAAGAAGCGCCGGGGCGAGATCG ACGCCGGCGAGGACATCACCTTCGTGATGGTCACCGGCGACGGCGGCATGGACATCGGCATGGGCCCGGCGATCGGCGCC GCGCTGCGCAACCACCGGATGATCATCCTGGAGTACGACAACGAGGGCTATATGAACACCGGCTCGCAGCTGTCGTACTC CACCCCCATCGGCCACAAGACCGCGACGTCCAACGTCGGCCGCCTGGGCGGCGGCAAGACCTTCCACCACAAGGACACGC CGCAGATCATGGCCGCCTGCCACATCCCGTACGTCTTCACGGCCGTGGAGTCGCAGCCGCAGGATCTGTGGAAGAAGGCC GCCAAGGCGCAGTGGTACGCCAAGAACGTCGGCCTGGCGTATGGCAAGCTGCTGATCGCCTGCCCGCTCAACTGGCTCTC GGAGGACCGGATGGGCAGCAAGATCGTGCAGGCCGCGGTGGACTGCAACTTCTTCCCGCTCTACGAGGTGGAGCGGGGCA AGACCCGGCTCACGTACGATCCCGAGGCCAAGGGCAAGAAGATCCCCGTGGAAGAGTGGCTGAAGATGATGGGCAAGACC CGCCATCTGCTGAAGCCCGAGTTCGCCGAGGTGCTGGAGGAGTTCAAGCAGGAGGTCGACCGCCGCTTCCGCCGGATCAA GGCGATGAGCGAACATCCCGACCTGTAA
Upstream 100 bases:
>100_bases CCGGTGGACGCCCTGCGGGAGATGCGGGAGCAGGACGGGTACGCCGACGCGCACACGGTGCGGCACGACCATCTGCTGGT TGTGGGGAGGTGAGCGGCCG
Downstream 100 bases:
>100_bases GCCAATCAGCGAAAGGCCGCCGGCTGCATCCGGCGGCCTTTCGCACGCCCGGCGCCGCGCCCACAGGGCAGGAGTTTGCG CGGGCCACGGAGAAACTCGC
Product: pyruvate ferredoxin oxidoreductase alpha-beta subunit
Products: NA
Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 755; Mature: 754
Protein sequence:
>755_residues MALKEEHLRVQKTTFKSGNEMAALAASQINFHLMGYYPITPSTEIAEFIDEMRVEGENNIVMIAGDGEHGAAGICYGAAV AGGRVFNATSANGYLYALEQMPVQSGTRMPMVMDLVTRSVSGPLDIRGDHSDLYFALNTGWIILYANNPQEVYDLHPIAV RVGEHPDVRLPVIVGFDGFFTSHQKRRVSYFEDPKVLQEFVGPQPEGFPHALDPRNPQTFGPYMNDPDLINNKYQLHLAM EAARRVIPEIFAEWERISGRRLEMVEAYRMEDADVALVLLGSAADTGKQVADKLREQGVRAGVVTLHVLRPFPAAEIRQV LRGVSAVVIGERADSYGSGGGNLSHEIKSALKDDPDNRTLVATRIYGLGGKDFYPADAEAFYELALEMARTGRVEVPFDY HGTTAATETQPLEVVRPLTREEQQSPVKVEVVGDELKVTVPPPRQMMGMPKRITPGHGACPGCGIFPALDNFFRALSGDV VVLFQTGCAMVVTTGYPYSAHRVTYIHNLFQNGAATLSGVVEMFYEKKRRGEIDAGEDITFVMVTGDGGMDIGMGPAIGA ALRNHRMIILEYDNEGYMNTGSQLSYSTPIGHKTATSNVGRLGGGKTFHHKDTPQIMAACHIPYVFTAVESQPQDLWKKA AKAQWYAKNVGLAYGKLLIACPLNWLSEDRMGSKIVQAAVDCNFFPLYEVERGKTRLTYDPEAKGKKIPVEEWLKMMGKT RHLLKPEFAEVLEEFKQEVDRRFRRIKAMSEHPDL
Sequences:
>Translated_755_residues MALKEEHLRVQKTTFKSGNEMAALAASQINFHLMGYYPITPSTEIAEFIDEMRVEGENNIVMIAGDGEHGAAGICYGAAV AGGRVFNATSANGYLYALEQMPVQSGTRMPMVMDLVTRSVSGPLDIRGDHSDLYFALNTGWIILYANNPQEVYDLHPIAV RVGEHPDVRLPVIVGFDGFFTSHQKRRVSYFEDPKVLQEFVGPQPEGFPHALDPRNPQTFGPYMNDPDLINNKYQLHLAM EAARRVIPEIFAEWERISGRRLEMVEAYRMEDADVALVLLGSAADTGKQVADKLREQGVRAGVVTLHVLRPFPAAEIRQV LRGVSAVVIGERADSYGSGGGNLSHEIKSALKDDPDNRTLVATRIYGLGGKDFYPADAEAFYELALEMARTGRVEVPFDY HGTTAATETQPLEVVRPLTREEQQSPVKVEVVGDELKVTVPPPRQMMGMPKRITPGHGACPGCGIFPALDNFFRALSGDV VVLFQTGCAMVVTTGYPYSAHRVTYIHNLFQNGAATLSGVVEMFYEKKRRGEIDAGEDITFVMVTGDGGMDIGMGPAIGA ALRNHRMIILEYDNEGYMNTGSQLSYSTPIGHKTATSNVGRLGGGKTFHHKDTPQIMAACHIPYVFTAVESQPQDLWKKA AKAQWYAKNVGLAYGKLLIACPLNWLSEDRMGSKIVQAAVDCNFFPLYEVERGKTRLTYDPEAKGKKIPVEEWLKMMGKT RHLLKPEFAEVLEEFKQEVDRRFRRIKAMSEHPDL >Mature_754_residues ALKEEHLRVQKTTFKSGNEMAALAASQINFHLMGYYPITPSTEIAEFIDEMRVEGENNIVMIAGDGEHGAAGICYGAAVA GGRVFNATSANGYLYALEQMPVQSGTRMPMVMDLVTRSVSGPLDIRGDHSDLYFALNTGWIILYANNPQEVYDLHPIAVR VGEHPDVRLPVIVGFDGFFTSHQKRRVSYFEDPKVLQEFVGPQPEGFPHALDPRNPQTFGPYMNDPDLINNKYQLHLAME AARRVIPEIFAEWERISGRRLEMVEAYRMEDADVALVLLGSAADTGKQVADKLREQGVRAGVVTLHVLRPFPAAEIRQVL RGVSAVVIGERADSYGSGGGNLSHEIKSALKDDPDNRTLVATRIYGLGGKDFYPADAEAFYELALEMARTGRVEVPFDYH GTTAATETQPLEVVRPLTREEQQSPVKVEVVGDELKVTVPPPRQMMGMPKRITPGHGACPGCGIFPALDNFFRALSGDVV VLFQTGCAMVVTTGYPYSAHRVTYIHNLFQNGAATLSGVVEMFYEKKRRGEIDAGEDITFVMVTGDGGMDIGMGPAIGAA LRNHRMIILEYDNEGYMNTGSQLSYSTPIGHKTATSNVGRLGGGKTFHHKDTPQIMAACHIPYVFTAVESQPQDLWKKAA KAQWYAKNVGLAYGKLLIACPLNWLSEDRMGSKIVQAAVDCNFFPLYEVERGKTRLTYDPEAKGKKIPVEEWLKMMGKTR HLLKPEFAEVLEEFKQEVDRRFRRIKAMSEHPDL
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=358, Percent_Identity=29.0502793296089, Blast_Score=122, Evalue=9e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 83641; Mature: 83509
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKEEHLRVQKTTFKSGNEMAALAASQINFHLMGYYPITPSTEIAEFIDEMRVEGENNI CCCCHHHHEEEEHHCCCCCCEEEEEHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCE VMIAGDGEHGAAGICYGAAVAGGRVFNATSANGYLYALEQMPVQSGTRMPMVMDLVTRSV EEEECCCCCCCCEEEEHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHC SGPLDIRGDHSDLYFALNTGWIILYANNPQEVYDLHPIAVRVGEHPDVRLPVIVGFDGFF CCCCEECCCCCCEEEEEECCEEEEEECCCCHHHCCCEEEEEECCCCCCEEEEEEECCCHH TSHQKRRVSYFEDPKVLQEFVGPQPEGFPHALDPRNPQTFGPYMNDPDLINNKYQLHLAM CCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEEEEEHH EAARRVIPEIFAEWERISGRRLEMVEAYRMEDADVALVLLGSAADTGKQVADKLREQGVR HHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCC AGVVTLHVLRPFPAAEIRQVLRGVSAVVIGERADSYGSGGGNLSHEIKSALKDDPDNRTL CCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEE VATRIYGLGGKDFYPADAEAFYELALEMARTGRVEVPFDYHGTTAATETQPLEVVRPLTR EEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHH EEQQSPVKVEVVGDELKVTVPPPRQMMGMPKRITPGHGACPGCGIFPALDNFFRALSGDV HHCCCCEEEEEECCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE VVLFQTGCAMVVTTGYPYSAHRVTYIHNLFQNGAATLSGVVEMFYEKKRRGEIDAGEDIT EEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEE FVMVTGDGGMDIGMGPAIGAALRNHRMIILEYDNEGYMNTGSQLSYSTPIGHKTATSNVG EEEEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCC RLGGGKTFHHKDTPQIMAACHIPYVFTAVESQPQDLWKKAAKAQWYAKNVGLAYGKLLIA CCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHCCEEEE CPLNWLSEDRMGSKIVQAAVDCNFFPLYEVERGKTRLTYDPEAKGKKIPVEEWLKMMGKT CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCH RHLLKPEFAEVLEEFKQEVDRRFRRIKAMSEHPDL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ALKEEHLRVQKTTFKSGNEMAALAASQINFHLMGYYPITPSTEIAEFIDEMRVEGENNI CCCHHHHEEEEHHCCCCCCEEEEEHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCE VMIAGDGEHGAAGICYGAAVAGGRVFNATSANGYLYALEQMPVQSGTRMPMVMDLVTRSV EEEECCCCCCCCEEEEHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHC SGPLDIRGDHSDLYFALNTGWIILYANNPQEVYDLHPIAVRVGEHPDVRLPVIVGFDGFF CCCCEECCCCCCEEEEEECCEEEEEECCCCHHHCCCEEEEEECCCCCCEEEEEEECCCHH TSHQKRRVSYFEDPKVLQEFVGPQPEGFPHALDPRNPQTFGPYMNDPDLINNKYQLHLAM CCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEEEEEHH EAARRVIPEIFAEWERISGRRLEMVEAYRMEDADVALVLLGSAADTGKQVADKLREQGVR HHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCC AGVVTLHVLRPFPAAEIRQVLRGVSAVVIGERADSYGSGGGNLSHEIKSALKDDPDNRTL CCEEEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEE VATRIYGLGGKDFYPADAEAFYELALEMARTGRVEVPFDYHGTTAATETQPLEVVRPLTR EEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHH EEQQSPVKVEVVGDELKVTVPPPRQMMGMPKRITPGHGACPGCGIFPALDNFFRALSGDV HHCCCCEEEEEECCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE VVLFQTGCAMVVTTGYPYSAHRVTYIHNLFQNGAATLSGVVEMFYEKKRRGEIDAGEDIT EEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEE FVMVTGDGGMDIGMGPAIGAALRNHRMIILEYDNEGYMNTGSQLSYSTPIGHKTATSNVG EEEEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCC RLGGGKTFHHKDTPQIMAACHIPYVFTAVESQPQDLWKKAAKAQWYAKNVGLAYGKLLIA CCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHCCEEEE CPLNWLSEDRMGSKIVQAAVDCNFFPLYEVERGKTRLTYDPEAKGKKIPVEEWLKMMGKT CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCH RHLLKPEFAEVLEEFKQEVDRRFRRIKAMSEHPDL HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550425; 10360571; 8305426 [H]