| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is veg [H]
Identifier: 51894382
GI number: 51894382
Start: 3461496
End: 3461774
Strand: Reverse
Name: veg [H]
Synonym: STH3247
Alternate gene names: 51894382
Gene position: 3461774-3461496 (Counterclockwise)
Preceding gene: 51894383
Following gene: 51894381
Centisome position: 97.07
GC content: 60.93
Gene sequence:
>279_bases TTGGCTTCCAGGAGCGTTCTAGTGGACATCAAGCGGGACCTCGAGGCGTACGTGGGGTCAAAGATCCGCCTGAGAGCCAA TAAGGGCCGCAAGAAGATCGTCGAGCGCGAAGGGGTACTGGAAGGTACATACCCGAACATCTTCACCGTCAGGCTTTCCG AAGCAGACTCGGTGCGCCGCGTCAGCTACAGCTACGCGGACCTGCTTACGGAGACGGTGGAGCTGGTGGTCTGCTCCGCG AGCGGCACGGAGACCAAGTTCGAGGCGCATTCCCGCTAG
Upstream 100 bases:
>100_bases AATACTGTTTTCCTTGACTCTGGGAGCCTGGCCTGCTATACTAAGATCGTGAACGATTTCGCCAGCCGACGCGGCGACGA GCGGGAAGGTGTGGTGGCAG
Downstream 100 bases:
>100_bases GCGACCCGAGACAAGAGCCAGGGAGAATCCCTGGCTTTTTCGGTGTGTGGAGGGAAATCCGGATGGAAATCGAATGCCAC GCAAAGGTGAACCTCACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MASRSVLVDIKRDLEAYVGSKIRLRANKGRKKIVEREGVLEGTYPNIFTVRLSEADSVRRVSYSYADLLTETVELVVCSA SGTETKFEAHSR
Sequences:
>Translated_92_residues MASRSVLVDIKRDLEAYVGSKIRLRANKGRKKIVEREGVLEGTYPNIFTVRLSEADSVRRVSYSYADLLTETVELVVCSA SGTETKFEAHSR >Mature_91_residues ASRSVLVDIKRDLEAYVGSKIRLRANKGRKKIVEREGVLEGTYPNIFTVRLSEADSVRRVSYSYADLLTETVELVVCSAS GTETKFEAHSR
Specific function: Unknown
COG id: COG4466
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009366 [H]
Pfam domain/function: PF06257 DUF1021 [H]
EC number: NA
Molecular weight: Translated: 10324; Mature: 10193
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRSVLVDIKRDLEAYVGSKIRLRANKGRKKIVEREGVLEGTYPNIFTVRLSEADSVRR CCCCCEEEEHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCCCCHHH VSYSYADLLTETVELVVCSASGTETKFEAHSR HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC >Mature Secondary Structure ASRSVLVDIKRDLEAYVGSKIRLRANKGRKKIVEREGVLEGTYPNIFTVRLSEADSVRR CCCCEEEEHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCCCCHHH VSYSYADLLTETVELVVCSASGTETKFEAHSR HHHHHHHHHHHHHHEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 6181373 [H]