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The map label for this gene is nudF [H]

Identifier: 51894332

GI number: 51894332

Start: 3407349

End: 3407840

Strand: Reverse

Name: nudF [H]

Synonym: STH3197

Alternate gene names: 51894332

Gene position: 3407840-3407349 (Counterclockwise)

Preceding gene: 51894333

Following gene: 51894331

Centisome position: 95.56

GC content: 70.93

Gene sequence:

>492_bases
ATGGAGATGGCGGGGGTTTTTCGCAGGGAAAGGGGATGTGCACGAATGGGCCGTGCCTACGCGGGCTACCCGATGCCTTC
CTGCCACGCGCTCATACGGGACGGGGACAGGGTGCTCCTGGTGCAGCGGGCGACGCCGCCGCTCCAGGGGTACTGGGGAC
TCCCCGGTGGCCGGGTGGAGCTGGGGGAGACGGTGGAGCAGGCGCTCCTGCGGGAGGTCCGGGAGGAGACGGGGCTGCAG
GTGGACATTGAGCGCTATCTGGGCTACATCGACGCGATCGACCGCGATGAGGCGGGGCGGGTGCGCTACCATTACGTGGT
GCACTACTTCACGGCCCGGCCGGCGGGGGGCAGCCTGCGCGCGGCCGACGACGCAGCCGACGCCCGCTGGGTGGCCCTGT
CAGAAGTCGGCGGTCTGCCCCTCACCGACGCGGTGCAGCTGTGCCTTAACTGGGACCGCCAGGAAGCGCCGCCCCGCGCC
GGGGCAGACTAA

Upstream 100 bases:

>100_bases
GCCGCCCCGGCCCAAGCCCGAGCCGCTGAAGCCGCGGATGGTCGGCGGCGGCACCTCGCAGGTGGCTCCTGCCTTCTGAT
CAGCGCCTGATGCCCCCGCC

Downstream 100 bases:

>100_bases
GGCCAGGAAGGAGGGTTCCCGTTGGCGGATCACTTCACCCGCTTCCCCCTGCACGAGGGCGTCAACCTCTACGTGCAGCC
GACGCGCAAGTTCAAGACGA

Product: MutT-like protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MEMAGVFRRERGCARMGRAYAGYPMPSCHALIRDGDRVLLVQRATPPLQGYWGLPGGRVELGETVEQALLREVREETGLQ
VDIERYLGYIDAIDRDEAGRVRYHYVVHYFTARPAGGSLRAADDAADARWVALSEVGGLPLTDAVQLCLNWDRQEAPPRA
GAD

Sequences:

>Translated_163_residues
MEMAGVFRRERGCARMGRAYAGYPMPSCHALIRDGDRVLLVQRATPPLQGYWGLPGGRVELGETVEQALLREVREETGLQ
VDIERYLGYIDAIDRDEAGRVRYHYVVHYFTARPAGGSLRAADDAADARWVALSEVGGLPLTDAVQLCLNWDRQEAPPRA
GAD
>Mature_163_residues
MEMAGVFRRERGCARMGRAYAGYPMPSCHALIRDGDRVLLVQRATPPLQGYWGLPGGRVELGETVEQALLREVREETGLQ
VDIERYLGYIDAIDRDEAGRVRYHYVVHYFTARPAGGSLRAADDAADARWVALSEVGGLPLTDAVQLCLNWDRQEAPPRA
GAD

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 18072; Mature: 18072

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMAGVFRRERGCARMGRAYAGYPMPSCHALIRDGDRVLLVQRATPPLQGYWGLPGGRVE
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCH
LGETVEQALLREVREETGLQVDIERYLGYIDAIDRDEAGRVRYHYVVHYFTARPAGGSLR
HHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCC
AADDAADARWVALSEVGGLPLTDAVQLCLNWDRQEAPPRAGAD
CCCCCCCCEEEEHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEMAGVFRRERGCARMGRAYAGYPMPSCHALIRDGDRVLLVQRATPPLQGYWGLPGGRVE
CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCH
LGETVEQALLREVREETGLQVDIERYLGYIDAIDRDEAGRVRYHYVVHYFTARPAGGSLR
HHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCC
AADDAADARWVALSEVGGLPLTDAVQLCLNWDRQEAPPRAGAD
CCCCCCCCEEEEHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]