Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894247

Identifier: 51894247

GI number: 51894247

Start: 3313132

End: 3313641

Strand: Reverse

Name: 51894247

Synonym: STH3112

Alternate gene names: NA

Gene position: 3313641-3313132 (Counterclockwise)

Preceding gene: 51894248

Following gene: 51894246

Centisome position: 92.92

GC content: 68.43

Gene sequence:

>510_bases
ATGTCAAGGGCGGGGTGTCGATCATACGCTGGAGGGAGGGAAGGAGGGGAGAGGATGAGCTGGAGGGACGACCACGACCG
GCGTTCCGGCCTGTGCGCGGACCTGGAGGACGACCGGGACTGCGGCTGCGGCGGTCACGGCTGGAACGGCCGCCACGACC
AGGACGGAGGCGACCGGTGGGATGGGGACCACGGCCACGGTCACCATGACCACCGCGGTGACCATGACCATCACGGCCAC
CATGACCACCACCATAACCACCACGGCGGCCATGACGGCCACCACCACCGTCACCGCCGGCGCCAGCGGCGGCTGATTCC
GATCGGCAGCGTAACCGTCGACTGTACGCCCGTGACCTTCCGCACGCCCGGCCAGGCCATCAATGTGGTCAGCTGCCCGG
TCTCCTGGATCATCCCCGGGACCCGCTGTATCGCCACGATCCACACGCCGCCGGTTCAGACACCCGTACTACCCATCCAC
AGGCACCGCAAGGCCTGCGGCTGCCACTGA

Upstream 100 bases:

>100_bases
CTGCAGCGGGTAAAGCGCAAGCTGGAGCGGTACTTAGAGAACCGGAACCAGTCACTGGAGAGAGGGCAAAACTAGGCCGC
AGGGGCGGCCTTTTTCTTTT

Downstream 100 bases:

>100_bases
TCATCCCCGGAGGGCCTGCGCCCTCCCGTACATTGAAACTGAGCGCAAAATGTGTTATGATATGCGCTGCGTTACCGTGC
TGGCGTAGCTCAACTGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSRAGCRSYAGGREGGERMSWRDDHDRRSGLCADLEDDRDCGCGGHGWNGRHDQDGGDRWDGDHGHGHHDHRGDHDHHGH
HDHHHNHHGGHDGHHHRHRRRQRRLIPIGSVTVDCTPVTFRTPGQAINVVSCPVSWIIPGTRCIATIHTPPVQTPVLPIH
RHRKACGCH

Sequences:

>Translated_169_residues
MSRAGCRSYAGGREGGERMSWRDDHDRRSGLCADLEDDRDCGCGGHGWNGRHDQDGGDRWDGDHGHGHHDHRGDHDHHGH
HDHHHNHHGGHDGHHHRHRRRQRRLIPIGSVTVDCTPVTFRTPGQAINVVSCPVSWIIPGTRCIATIHTPPVQTPVLPIH
RHRKACGCH
>Mature_168_residues
SRAGCRSYAGGREGGERMSWRDDHDRRSGLCADLEDDRDCGCGGHGWNGRHDQDGGDRWDGDHGHGHHDHRGDHDHHGHH
DHHHNHHGGHDGHHHRHRRRQRRLIPIGSVTVDCTPVTFRTPGQAINVVSCPVSWIIPGTRCIATIHTPPVQTPVLPIHR
HRKACGCH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18985; Mature: 18854

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAGCRSYAGGREGGERMSWRDDHDRRSGLCADLEDDRDCGCGGHGWNGRHDQDGGDRW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGDHGHGHHDHRGDHDHHGHHDHHHNHHGGHDGHHHRHRRRQRRLIPIGSVTVDCTPVTF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCEEE
RTPGQAINVVSCPVSWIIPGTRCIATIHTPPVQTPVLPIHRHRKACGCH
ECCCCEEEEEECCCEEEECCCEEEEEECCCCCCCCCCCHHHCCHHCCCC
>Mature Secondary Structure 
SRAGCRSYAGGREGGERMSWRDDHDRRSGLCADLEDDRDCGCGGHGWNGRHDQDGGDRW
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGDHGHGHHDHRGDHDHHGHHDHHHNHHGGHDGHHHRHRRRQRRLIPIGSVTVDCTPVTF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCEEE
RTPGQAINVVSCPVSWIIPGTRCIATIHTPPVQTPVLPIHRHRKACGCH
ECCCCEEEEEECCCEEEECCCEEEEEECCCCCCCCCCCHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA