Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is yvbK [H]

Identifier: 51894246

GI number: 51894246

Start: 3312146

End: 3312607

Strand: Reverse

Name: yvbK [H]

Synonym: STH3111

Alternate gene names: 51894246

Gene position: 3312607-3312146 (Counterclockwise)

Preceding gene: 51894247

Following gene: 51894245

Centisome position: 92.89

GC content: 67.32

Gene sequence:

>462_bases
GTGGATGACCTGATGATCCGGCAGATGCGGCACGACGAGGAGCCGCCGATGGACCTGCTGCTCATGGCCGATCCGTCGCG
GGAGATGGTCGCCGGGTACCTCGGCCGCGGCCGGTGCTACGTGGGCGAACGGGCCGGGCGGGTGGTGGCCGTCTGCGTCC
TCATCGACACCCGGCCGTACACGGCCGAGCTGGTCAACGTGGCCGTGGCGGAGGAAGAGCGGGGCAGAGGGATCGGCAAG
CGGATGGTTCTCCATGCGATCGCGGTCGCCCGCTCGCTGGGATACCGGTGCATCGAACTGGGCACGGGCAACTCCTCCGT
TGACCAGCTGGCGCTTTACCAGAAGTGCGGCTTCCGGATCGTGGGCGTGGACCCGGACTACTTCACCCGGCATTATCCCG
AGCCGATCTACGAGAACGGGATCCCGTGCAGGGACATGCTCCGCCTCCGACTGGATCTCTGA

Upstream 100 bases:

>100_bases
CGGATGCGAACCGGGGACAACACGTCCTCCATATACCGCAACTACGCCGTCAACATGGTGCCGCTGGGTGCACAGGCCCT
TCTCCGGCGGAGGTGGTTGA

Downstream 100 bases:

>100_bases
GAAGCACGCCGATAGAAAAGCCCTGGCAGCGGGCGCCGGGGCTCTTGCCGTGGGAGCAGGAGAAGATGACGCTCCGAGGG
TCAGGGCCCTCGGAGCCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MDDLMIRQMRHDEEPPMDLLLMADPSREMVAGYLGRGRCYVGERAGRVVAVCVLIDTRPYTAELVNVAVAEEERGRGIGK
RMVLHAIAVARSLGYRCIELGTGNSSVDQLALYQKCGFRIVGVDPDYFTRHYPEPIYENGIPCRDMLRLRLDL

Sequences:

>Translated_153_residues
MDDLMIRQMRHDEEPPMDLLLMADPSREMVAGYLGRGRCYVGERAGRVVAVCVLIDTRPYTAELVNVAVAEEERGRGIGK
RMVLHAIAVARSLGYRCIELGTGNSSVDQLALYQKCGFRIVGVDPDYFTRHYPEPIYENGIPCRDMLRLRLDL
>Mature_153_residues
MDDLMIRQMRHDEEPPMDLLLMADPSREMVAGYLGRGRCYVGERAGRVVAVCVLIDTRPYTAELVNVAVAEEERGRGIGK
RMVLHAIAVARSLGYRCIELGTGNSSVDQLALYQKCGFRIVGVDPDYFTRHYPEPIYENGIPCRDMLRLRLDL

Specific function: Probable N-acetyltransferase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 17289; Mature: 17289

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDLMIRQMRHDEEPPMDLLLMADPSREMVAGYLGRGRCYVGERAGRVVAVCVLIDTRPY
CCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCC
TAELVNVAVAEEERGRGIGKRMVLHAIAVARSLGYRCIELGTGNSSVDQLALYQKCGFRI
HHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEE
VGVDPDYFTRHYPEPIYENGIPCRDMLRLRLDL
EECCCHHHHHCCCCCHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDDLMIRQMRHDEEPPMDLLLMADPSREMVAGYLGRGRCYVGERAGRVVAVCVLIDTRPY
CCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCC
TAELVNVAVAEEERGRGIGKRMVLHAIAVARSLGYRCIELGTGNSSVDQLALYQKCGFRI
HHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCEE
VGVDPDYFTRHYPEPIYENGIPCRDMLRLRLDL
EECCCHHHHHCCCCCHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]