Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is flgL [H]

Identifier: 51894115

GI number: 51894115

Start: 3200795

End: 3201676

Strand: Reverse

Name: flgL [H]

Synonym: STH2979

Alternate gene names: 51894115

Gene position: 3201676-3200795 (Counterclockwise)

Preceding gene: 51894116

Following gene: 51894114

Centisome position: 89.78

GC content: 62.93

Gene sequence:

>882_bases
ATGCGTGTAACGAACTGGATGCTCGTCAACACGGCCATCCGGGAGCTGGAGGGCCTCCGCGCGCAGTACGCCAGGGCGCA
GAAGAGGGTTTACGGCCGCGCCCTCGAGCGTCCCTCCGACGACCCGCAGCGGGTAATCGAGGCGATCGACCTGACCGGCA
TGAAGGTGAAGCTGGAGCGGGCGCAACGGGCCGCCACCGACGCGAAGGAGTGGCTTTCGATCGCGGAGACCAGCCTGACG
GCCATGTCAGAAGACCTTCAGGCGGTCTATGAGACGATGATCCAGTTCGGATCACCGGCCAATCAGGAGTCCACGGCCAG
GGAGAACCTAGCGCTGCAGATCGAAGGGCTGCGGGATGCGATCAAGAGGGAGATGAACACACAGCACCGCGGGCGCTACG
TGTTCGCGGGGTGGGCCGCGGACACACAGCCCTTTGAGGATGACGGCTCGGGCGGTGTGGAGTACAAGGGCAGCAAGCAC
AAGATCGAACGGGAGATCGCGCCGGGGTACAAGGTGGCGATCAACATCCATGGCGATGAACTGCCCTATGAAATCATCGC
TACCCTGACCGAGGTGGCAAACGCCATCCGCACCGGCACCGTTGAGGATGTCACAAAGCACCTGGACAAGGTGCAGGCTG
CCGCCGACGAGTTGCTGGCCCGACGGTCGGAGGTCGGGCTGGCCTACCAGCAGGTGGAGCAGTTCGAAGGGTATTCCCGT
GACGGCCTGATTACGGTCGAAGAGCGGCTGGGTAAGATTAGCGGCGGCGACATTGCAGAAGCTGTGATGGAGATGACCCA
GGCGCAGCAGGCCTTCCAGGTGGCCCTGACGGCGTTCAGCATGGCTCTGCCGAAGTCGCTGATGGACTACATGTTCCGAT
AG

Upstream 100 bases:

>100_bases
ACGGCGGAGCAGAAGGCCTTCGCCGCCGTGGCCCGGGTGCTGACGGTACTGGACGAGATGCTGCAGACCCTGATCAACGC
GGTGTCCTAGGGGTGATCGC

Downstream 100 bases:

>100_bases
TTGGCTTCCAAGGGAGGCATGAGGGATGAAGGTGACGGCACCCGTCAGCGGCCCGACTCCGGTCCCCGACCGGACCGTGA
CGCCGCGTGAGACGGCTGAC

Product: flagellar-hook associated protein

Products: NA

Alternate protein names: HAP3 [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRVTNWMLVNTAIRELEGLRAQYARAQKRVYGRALERPSDDPQRVIEAIDLTGMKVKLERAQRAATDAKEWLSIAETSLT
AMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDAIKREMNTQHRGRYVFAGWAADTQPFEDDGSGGVEYKGSKH
KIEREIAPGYKVAINIHGDELPYEIIATLTEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSR
DGLITVEERLGKISGGDIAEAVMEMTQAQQAFQVALTAFSMALPKSLMDYMFR

Sequences:

>Translated_293_residues
MRVTNWMLVNTAIRELEGLRAQYARAQKRVYGRALERPSDDPQRVIEAIDLTGMKVKLERAQRAATDAKEWLSIAETSLT
AMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDAIKREMNTQHRGRYVFAGWAADTQPFEDDGSGGVEYKGSKH
KIEREIAPGYKVAINIHGDELPYEIIATLTEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSR
DGLITVEERLGKISGGDIAEAVMEMTQAQQAFQVALTAFSMALPKSLMDYMFR
>Mature_293_residues
MRVTNWMLVNTAIRELEGLRAQYARAQKRVYGRALERPSDDPQRVIEAIDLTGMKVKLERAQRAATDAKEWLSIAETSLT
AMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDAIKREMNTQHRGRYVFAGWAADTQPFEDDGSGGVEYKGSKH
KIEREIAPGYKVAINIHGDELPYEIIATLTEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSR
DGLITVEERLGKISGGDIAEAVMEMTQAQQAFQVALTAFSMALPKSLMDYMFR

Specific function: Unknown

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1787324, Length=309, Percent_Identity=21.6828478964401, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013384
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 32737; Mature: 32737

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTNWMLVNTAIRELEGLRAQYARAQKRVYGRALERPSDDPQRVIEAIDLTGMKVKLER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHH
AQRAATDAKEWLSIAETSLTAMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEHHHHHH
IKREMNTQHRGRYVFAGWAADTQPFEDDGSGGVEYKGSKHKIEREIAPGYKVAINIHGDE
HHHHHCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCC
LPYEIIATLTEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSR
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DGLITVEERLGKISGGDIAEAVMEMTQAQQAFQVALTAFSMALPKSLMDYMFR
CCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVTNWMLVNTAIRELEGLRAQYARAQKRVYGRALERPSDDPQRVIEAIDLTGMKVKLER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHH
AQRAATDAKEWLSIAETSLTAMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEHHHHHH
IKREMNTQHRGRYVFAGWAADTQPFEDDGSGGVEYKGSKHKIEREIAPGYKVAINIHGDE
HHHHHCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCC
LPYEIIATLTEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSR
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DGLITVEERLGKISGGDIAEAVMEMTQAQQAFQVALTAFSMALPKSLMDYMFR
CCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]