| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is flgL [H]
Identifier: 51894115
GI number: 51894115
Start: 3200795
End: 3201676
Strand: Reverse
Name: flgL [H]
Synonym: STH2979
Alternate gene names: 51894115
Gene position: 3201676-3200795 (Counterclockwise)
Preceding gene: 51894116
Following gene: 51894114
Centisome position: 89.78
GC content: 62.93
Gene sequence:
>882_bases ATGCGTGTAACGAACTGGATGCTCGTCAACACGGCCATCCGGGAGCTGGAGGGCCTCCGCGCGCAGTACGCCAGGGCGCA GAAGAGGGTTTACGGCCGCGCCCTCGAGCGTCCCTCCGACGACCCGCAGCGGGTAATCGAGGCGATCGACCTGACCGGCA TGAAGGTGAAGCTGGAGCGGGCGCAACGGGCCGCCACCGACGCGAAGGAGTGGCTTTCGATCGCGGAGACCAGCCTGACG GCCATGTCAGAAGACCTTCAGGCGGTCTATGAGACGATGATCCAGTTCGGATCACCGGCCAATCAGGAGTCCACGGCCAG GGAGAACCTAGCGCTGCAGATCGAAGGGCTGCGGGATGCGATCAAGAGGGAGATGAACACACAGCACCGCGGGCGCTACG TGTTCGCGGGGTGGGCCGCGGACACACAGCCCTTTGAGGATGACGGCTCGGGCGGTGTGGAGTACAAGGGCAGCAAGCAC AAGATCGAACGGGAGATCGCGCCGGGGTACAAGGTGGCGATCAACATCCATGGCGATGAACTGCCCTATGAAATCATCGC TACCCTGACCGAGGTGGCAAACGCCATCCGCACCGGCACCGTTGAGGATGTCACAAAGCACCTGGACAAGGTGCAGGCTG CCGCCGACGAGTTGCTGGCCCGACGGTCGGAGGTCGGGCTGGCCTACCAGCAGGTGGAGCAGTTCGAAGGGTATTCCCGT GACGGCCTGATTACGGTCGAAGAGCGGCTGGGTAAGATTAGCGGCGGCGACATTGCAGAAGCTGTGATGGAGATGACCCA GGCGCAGCAGGCCTTCCAGGTGGCCCTGACGGCGTTCAGCATGGCTCTGCCGAAGTCGCTGATGGACTACATGTTCCGAT AG
Upstream 100 bases:
>100_bases ACGGCGGAGCAGAAGGCCTTCGCCGCCGTGGCCCGGGTGCTGACGGTACTGGACGAGATGCTGCAGACCCTGATCAACGC GGTGTCCTAGGGGTGATCGC
Downstream 100 bases:
>100_bases TTGGCTTCCAAGGGAGGCATGAGGGATGAAGGTGACGGCACCCGTCAGCGGCCCGACTCCGGTCCCCGACCGGACCGTGA CGCCGCGTGAGACGGCTGAC
Product: flagellar-hook associated protein
Products: NA
Alternate protein names: HAP3 [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MRVTNWMLVNTAIRELEGLRAQYARAQKRVYGRALERPSDDPQRVIEAIDLTGMKVKLERAQRAATDAKEWLSIAETSLT AMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDAIKREMNTQHRGRYVFAGWAADTQPFEDDGSGGVEYKGSKH KIEREIAPGYKVAINIHGDELPYEIIATLTEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSR DGLITVEERLGKISGGDIAEAVMEMTQAQQAFQVALTAFSMALPKSLMDYMFR
Sequences:
>Translated_293_residues MRVTNWMLVNTAIRELEGLRAQYARAQKRVYGRALERPSDDPQRVIEAIDLTGMKVKLERAQRAATDAKEWLSIAETSLT AMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDAIKREMNTQHRGRYVFAGWAADTQPFEDDGSGGVEYKGSKH KIEREIAPGYKVAINIHGDELPYEIIATLTEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSR DGLITVEERLGKISGGDIAEAVMEMTQAQQAFQVALTAFSMALPKSLMDYMFR >Mature_293_residues MRVTNWMLVNTAIRELEGLRAQYARAQKRVYGRALERPSDDPQRVIEAIDLTGMKVKLERAQRAATDAKEWLSIAETSLT AMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDAIKREMNTQHRGRYVFAGWAADTQPFEDDGSGGVEYKGSKH KIEREIAPGYKVAINIHGDELPYEIIATLTEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSR DGLITVEERLGKISGGDIAEAVMEMTQAQQAFQVALTAFSMALPKSLMDYMFR
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=309, Percent_Identity=21.6828478964401, Blast_Score=69, Evalue=4e-13,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 32737; Mature: 32737
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTNWMLVNTAIRELEGLRAQYARAQKRVYGRALERPSDDPQRVIEAIDLTGMKVKLER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHH AQRAATDAKEWLSIAETSLTAMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEHHHHHH IKREMNTQHRGRYVFAGWAADTQPFEDDGSGGVEYKGSKHKIEREIAPGYKVAINIHGDE HHHHHCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCC LPYEIIATLTEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSR CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGLITVEERLGKISGGDIAEAVMEMTQAQQAFQVALTAFSMALPKSLMDYMFR CCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRVTNWMLVNTAIRELEGLRAQYARAQKRVYGRALERPSDDPQRVIEAIDLTGMKVKLER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHH AQRAATDAKEWLSIAETSLTAMSEDLQAVYETMIQFGSPANQESTARENLALQIEGLRDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEHHHHHH IKREMNTQHRGRYVFAGWAADTQPFEDDGSGGVEYKGSKHKIEREIAPGYKVAINIHGDE HHHHHCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCC LPYEIIATLTEVANAIRTGTVEDVTKHLDKVQAAADELLARRSEVGLAYQQVEQFEGYSR CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DGLITVEERLGKISGGDIAEAVMEMTQAQQAFQVALTAFSMALPKSLMDYMFR CCEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]