Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is thiT [H]

Identifier: 51894093

GI number: 51894093

Start: 3179918

End: 3180466

Strand: Reverse

Name: thiT [H]

Synonym: STH2957

Alternate gene names: 51894093

Gene position: 3180466-3179918 (Counterclockwise)

Preceding gene: 51894096

Following gene: 51894092

Centisome position: 89.19

GC content: 69.95

Gene sequence:

>549_bases
ATGTCCGATACTCGGGTTCGTCTCCGGCGCCTGGTCGAGACCGCGATGATGATCGCGGCCGCGGTGGCGCTTTCGTATGT
GAAGGTGTGGGAGATGCCGCAGGGGGGCTCCGTCACGCTCGGTTCCATGGTGCCGATCCTGCTGGTGGGTCTGCGCCACG
GTCCCGGCTGGGGTATCCTCGCAGGAGTGCTGGACGGGCTGCTGCAGTTCTGGCTCGACCCGTACTTCTACCATCCGGTG
CAGGTGCTGCTGGACTACCCGATCGCCTTTGGCCTGCTGGGCCTCGCCGGGCTCGCCCGCGGCCACGCCCGCTGGGCGGC
CGCCTGGCTGGGCAGCCTGGCCATCGCCGGCCGGTTCGCCGCGCACGTCATCGCCGGCGTGGTCTTCTTCGGCCAGTTCG
CGCCCGAGGGGCAGAGCCCGCTGGTGTACTCCCTGATCTACAACGGCTCGTACCTGCTGCCCGAGGCTGTGCTGAGCGCG
GTGCTGCTGATGGTCCTGCTCCCGGCCCTTGACCGGGCGCTGCCGGCGCAGGTGGGCTCCGCGCATTAG

Upstream 100 bases:

>100_bases
AAGCGAGCCTCGCGGACACTTCGTGTACCGCAGCTCGCTGGGGCTGCGGTTTTCTCGTGCCACGCGATGGTGACTACGAT
TCTGCGCGGAGGTGTCCGTC

Downstream 100 bases:

>100_bases
CGGCGGCGCGCCCGCTTCCCCGCCGCTCCCCGGTACGTCATAATGAAGGTTGGGATGTGACATGCGTATCTCAGGGGAGG
TCGGCTGGGGATGCGGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSDTRVRLRRLVETAMMIAAAVALSYVKVWEMPQGGSVTLGSMVPILLVGLRHGPGWGILAGVLDGLLQFWLDPYFYHPV
QVLLDYPIAFGLLGLAGLARGHARWAAAWLGSLAIAGRFAAHVIAGVVFFGQFAPEGQSPLVYSLIYNGSYLLPEAVLSA
VLLMVLLPALDRALPAQVGSAH

Sequences:

>Translated_182_residues
MSDTRVRLRRLVETAMMIAAAVALSYVKVWEMPQGGSVTLGSMVPILLVGLRHGPGWGILAGVLDGLLQFWLDPYFYHPV
QVLLDYPIAFGLLGLAGLARGHARWAAAWLGSLAIAGRFAAHVIAGVVFFGQFAPEGQSPLVYSLIYNGSYLLPEAVLSA
VLLMVLLPALDRALPAQVGSAH
>Mature_181_residues
SDTRVRLRRLVETAMMIAAAVALSYVKVWEMPQGGSVTLGSMVPILLVGLRHGPGWGILAGVLDGLLQFWLDPYFYHPVQ
VLLDYPIAFGLLGLAGLARGHARWAAAWLGSLAIAGRFAAHVIAGVVFFGQFAPEGQSPLVYSLIYNGSYLLPEAVLSAV
LLMVLLPALDRALPAQVGSAH

Specific function: Probable proton-coupled thiamine transporter [H]

COG id: COG3859

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proton-coupled thiamine transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012651 [H]

Pfam domain/function: PF09515 Thia_YuaJ [H]

EC number: NA

Molecular weight: Translated: 19447; Mature: 19316

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTRVRLRRLVETAMMIAAAVALSYVKVWEMPQGGSVTLGSMVPILLVGLRHGPGWGIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCCHHHH
AGVLDGLLQFWLDPYFYHPVQVLLDYPIAFGLLGLAGLARGHARWAAAWLGSLAIAGRFA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHVIAGVVFFGQFAPEGQSPLVYSLIYNGSYLLPEAVLSAVLLMVLLPALDRALPAQVGS
HHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
AH
CC
>Mature Secondary Structure 
SDTRVRLRRLVETAMMIAAAVALSYVKVWEMPQGGSVTLGSMVPILLVGLRHGPGWGIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCCCHHHH
AGVLDGLLQFWLDPYFYHPVQVLLDYPIAFGLLGLAGLARGHARWAAAWLGSLAIAGRFA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHVIAGVVFFGQFAPEGQSPLVYSLIYNGSYLLPEAVLSAVLLMVLLPALDRALPAQVGS
HHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
AH
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]