Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894081

Identifier: 51894081

GI number: 51894081

Start: 3169405

End: 3170724

Strand: Reverse

Name: 51894081

Synonym: STH2945

Alternate gene names: NA

Gene position: 3170724-3169405 (Counterclockwise)

Preceding gene: 51894082

Following gene: 51894080

Centisome position: 88.91

GC content: 70.0

Gene sequence:

>1320_bases
ATGAAAGGACCGAAGAAGGCAGGGCCCCAGGTGATCGATCCGGCCCTGTCGCCGCCGATCTACGTGCCCATCGGCATGGC
GCTGGCCGGGGTCCTGGGGCTGCTCGTGCTCCAGGCGCTGGTCATCGCCAAGGCGCCCATGATCTTCGGCCCCTTCCGGT
TCAACCCCGCGGCGCTCGCGGCCGTTCATCTGTTCACGCTGGGCTTTGCCACCAGCGTCATGATCGGCGCGTTCCATCAG
ATCACCCCGGTGATGATGCGGGGGCGTCCGGTGGAGGGCGGGTGGGCCCTGCTGCAGGGCCTCGCTTACCTTGCCGGCAG
CTGGGCCCTGGTCTGGGGGTTTTACCGCTCCGCCGGGCCGTGGATCACGGCGGGGGGCACCCTGGTGGTGTTGGCCCTCG
TCGTCTTCGCCGCGCTGGTGGTCCGGGCGATGCGGTCCGCCACCCAGTGGACCGTCGCCGGCCGCTTCATGGCGGCGGCC
CTCTCGTTCGTGCTGGGTACGGTGATCTGGGGCCTGGTCCTGGCGTTCAACCTGCGGCGGGGTTTCCTGCCCGACAGCCT
GGATTACTCGCCGCTGGGGGCGCACGTGCTGCTCGGCCTGGGCGGATGGTTCATGCTCACGGTCTTCGGCGTCTCGTACC
AGCTCTTCCCCATGTTCGCCCTCACCAACCGGCCGAGCGCCGCGTCGGGCCACGCCGTGCTCGCCAAGCTCTCGGCGGGG
CTCTGGGGCGCGTTTGCATCGCTGCTCCTGCACCTGCCGGCGCTCACGGCCGCGTGCCTGCTGCTGGCCGCGGCCGGTGC
GGCCCGGTACGCCGCCGACTTCTTCGCCATGATGCGGCAGCGCCGCCGGCCCGAGCTGGACCTGTCCATGCGCTATGGGG
TGACCGCGCTGGCCTTCCTCGTGCCGGCCGCGCTTCTGCTCCTGCTCAGCGTCCGGCACCGCGCCTTCGCCGTCCCCGGC
GCCTGGCTCTTCCTGTTCGGCTTCGTGGCCACGATGATCCTGGGGATGCTCTACAGGATCATCCCCTTCCTCTTCTGGCA
CCACCTCATGAGAAACCGGCGCTCCAAGACCCAGCGGCTGCCCAAGCTGGACGAGATGTTCGCACAGCGGACGGCGCGGG
CCGGGTACTTCTGCTGGACGGCAGGGGTGCTGCTCACCGGGCTGCTGCTGCTGGGCGGCGCGCTGGGCTGGTGGGACGCC
CGGTATCTGGTGCGGGGGAGCGCCATACTAAACCTGACCGGCAGCCTGCTGTTCGCCGGCACCATCCTCCAAGTGCTTCG
GGCCAGGCCGCTGGACGGAAGGGAGCGATCCATGGGATGA

Upstream 100 bases:

>100_bases
CCGCGGCCGGGACCATCTGGTTCTACCCGCCGGGCGAGCCGTTCGGCGTCAGGGCGACCGGCGAGCCCGCCACCGTGCTG
GCGACGTATGCGCCGCGGCC

Downstream 100 bases:

>100_bases
ACAACTCCGCCGACCTCCGCCGGGAGCCGACCCGGCCTGCGGACCGGGAGGCGCTGGCGCGCACGCTGCTCCGCAATGTC
TACGATCCGGAGATCGGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MKGPKKAGPQVIDPALSPPIYVPIGMALAGVLGLLVLQALVIAKAPMIFGPFRFNPAALAAVHLFTLGFATSVMIGAFHQ
ITPVMMRGRPVEGGWALLQGLAYLAGSWALVWGFYRSAGPWITAGGTLVVLALVVFAALVVRAMRSATQWTVAGRFMAAA
LSFVLGTVIWGLVLAFNLRRGFLPDSLDYSPLGAHVLLGLGGWFMLTVFGVSYQLFPMFALTNRPSAASGHAVLAKLSAG
LWGAFASLLLHLPALTAACLLLAAAGAARYAADFFAMMRQRRRPELDLSMRYGVTALAFLVPAALLLLLSVRHRAFAVPG
AWLFLFGFVATMILGMLYRIIPFLFWHHLMRNRRSKTQRLPKLDEMFAQRTARAGYFCWTAGVLLTGLLLLGGALGWWDA
RYLVRGSAILNLTGSLLFAGTILQVLRARPLDGRERSMG

Sequences:

>Translated_439_residues
MKGPKKAGPQVIDPALSPPIYVPIGMALAGVLGLLVLQALVIAKAPMIFGPFRFNPAALAAVHLFTLGFATSVMIGAFHQ
ITPVMMRGRPVEGGWALLQGLAYLAGSWALVWGFYRSAGPWITAGGTLVVLALVVFAALVVRAMRSATQWTVAGRFMAAA
LSFVLGTVIWGLVLAFNLRRGFLPDSLDYSPLGAHVLLGLGGWFMLTVFGVSYQLFPMFALTNRPSAASGHAVLAKLSAG
LWGAFASLLLHLPALTAACLLLAAAGAARYAADFFAMMRQRRRPELDLSMRYGVTALAFLVPAALLLLLSVRHRAFAVPG
AWLFLFGFVATMILGMLYRIIPFLFWHHLMRNRRSKTQRLPKLDEMFAQRTARAGYFCWTAGVLLTGLLLLGGALGWWDA
RYLVRGSAILNLTGSLLFAGTILQVLRARPLDGRERSMG
>Mature_439_residues
MKGPKKAGPQVIDPALSPPIYVPIGMALAGVLGLLVLQALVIAKAPMIFGPFRFNPAALAAVHLFTLGFATSVMIGAFHQ
ITPVMMRGRPVEGGWALLQGLAYLAGSWALVWGFYRSAGPWITAGGTLVVLALVVFAALVVRAMRSATQWTVAGRFMAAA
LSFVLGTVIWGLVLAFNLRRGFLPDSLDYSPLGAHVLLGLGGWFMLTVFGVSYQLFPMFALTNRPSAASGHAVLAKLSAG
LWGAFASLLLHLPALTAACLLLAAAGAARYAADFFAMMRQRRRPELDLSMRYGVTALAFLVPAALLLLLSVRHRAFAVPG
AWLFLFGFVATMILGMLYRIIPFLFWHHLMRNRRSKTQRLPKLDEMFAQRTARAGYFCWTAGVLLTGLLLLGGALGWWDA
RYLVRGSAILNLTGSLLFAGTILQVLRARPLDGRERSMG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47457; Mature: 47457

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA