| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is argB
Identifier: 51894018
GI number: 51894018
Start: 3106909
End: 3107790
Strand: Reverse
Name: argB
Synonym: STH2882
Alternate gene names: 51894018
Gene position: 3107790-3106909 (Counterclockwise)
Preceding gene: 51894019
Following gene: 51894017
Centisome position: 87.15
GC content: 69.39
Gene sequence:
>882_bases GTGGATCAGCAGGCGCTGGACAAGGCGGCGGTGCTGGCGGAGGCGCTGCCGTACATCCGCGAGTTCTCGGGCAAGACGGT GGTCATCAAGTACGGCGGGGCGGCGATGGCCGCCGCCGATCTGAAGGCCGCGGTCATGCAGGACATCGCCCTGATGAAGT ACGTGGGCATGCACCCGATCGTGGTGCACGGCGGCGGGCCGGAGGTGTCGGAGTTGGCCCGGCGGATGGGCATCGAGCCC CAGTTCGTGGACGGGCTGCGGGTGACCGACGCGGCCACCATGGAGATCGCTCAGATGGTGCTGGTGGGCAAGACGAACCG GGAGATCGTCACCCACCTGTGCGCCCAGGGCGTGAAGGCGGTGGGCCTCTCGGGGCAGGACGCCGGCCTCATCCGGGCCG CAAGGCACCTGCACCGCTCCCGGGAGACCGGGGAGATGGTGGACCTGGGCTTTGTGGGAGACGTGGCCGCGGTGGACACC GAGGTGCTGACGACGCTCACCACCGCCGGCTACGTGCCGGTGATCGCCCCCATCGGGGTGGGGCCCGGCGGGCAACCCTA TAACATCAACGCAGACACGGTGGCCGGCGCCATCGCCGCGGCCATGAAGGCGGAGAAGCTGGTGCTGCTCACCGACGTGG AGGGGGTCCGGGCCGACAAGGATGACCCCTCCAGCCTGCTGAGCCGGGTGACGGCGCAGGAGGTCAAGTCCTGGATCGCC CGGGGCAGACTGCAGGGCGGGATGATCCCGAAACTCCAGTGCTGCCTGACGGCCCTGGAGGGCGGCGTCAACCGGGTCCA CATCATCGACGGCCGGGTGCCCCACAGCCTGCTGTTGGAGATCTTCACGGACGAGGGCGTCGGCACCATGGTGGTCAAGT AG
Upstream 100 bases:
>100_bases GGGAAGGGAGCCGCTGCCCATGTGAGGGCGGCCGGCTCCCCTTGAATATGCATGCACACTGAAGTATAATTATGCAATCA CACCCCAGGAGGCGGGTTCC
Downstream 100 bases:
>100_bases CGGAGGGGATGGCGATGGCGGACGTGAGCGGATCGAGGAGCGCAGCCCTGATGGCCCGGGCGGACGCGCACACGATGAAG ACCTACGGGCGTTACCCGAT
Product: acetylglutamate kinase
Products: NA
Alternate protein names: N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; AGK
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MDQQALDKAAVLAEALPYIREFSGKTVVIKYGGAAMAAADLKAAVMQDIALMKYVGMHPIVVHGGGPEVSELARRMGIEP QFVDGLRVTDAATMEIAQMVLVGKTNREIVTHLCAQGVKAVGLSGQDAGLIRAARHLHRSRETGEMVDLGFVGDVAAVDT EVLTTLTTAGYVPVIAPIGVGPGGQPYNINADTVAGAIAAAMKAEKLVLLTDVEGVRADKDDPSSLLSRVTAQEVKSWIA RGRLQGGMIPKLQCCLTALEGGVNRVHIIDGRVPHSLLLEIFTDEGVGTMVVK
Sequences:
>Translated_293_residues MDQQALDKAAVLAEALPYIREFSGKTVVIKYGGAAMAAADLKAAVMQDIALMKYVGMHPIVVHGGGPEVSELARRMGIEP QFVDGLRVTDAATMEIAQMVLVGKTNREIVTHLCAQGVKAVGLSGQDAGLIRAARHLHRSRETGEMVDLGFVGDVAAVDT EVLTTLTTAGYVPVIAPIGVGPGGQPYNINADTVAGAIAAAMKAEKLVLLTDVEGVRADKDDPSSLLSRVTAQEVKSWIA RGRLQGGMIPKLQCCLTALEGGVNRVHIIDGRVPHSLLLEIFTDEGVGTMVVK >Mature_293_residues MDQQALDKAAVLAEALPYIREFSGKTVVIKYGGAAMAAADLKAAVMQDIALMKYVGMHPIVVHGGGPEVSELARRMGIEP QFVDGLRVTDAATMEIAQMVLVGKTNREIVTHLCAQGVKAVGLSGQDAGLIRAARHLHRSRETGEMVDLGFVGDVAAVDT EVLTTLTTAGYVPVIAPIGVGPGGQPYNINADTVAGAIAAAMKAEKLVLLTDVEGVRADKDDPSSLLSRVTAQEVKSWIA RGRLQGGMIPKLQCCLTALEGGVNRVHIIDGRVPHSLLLEIFTDEGVGTMVVK
Specific function: Arginine biosynthesis; first step. [C]
COG id: COG0548
COG function: function code E; Acetylglutamate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetylglutamate kinase family
Homologues:
Organism=Escherichia coli, GI1789181, Length=287, Percent_Identity=26.4808362369338, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI145693208, Length=235, Percent_Identity=30.2127659574468, Blast_Score=78, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6320913, Length=297, Percent_Identity=28.2828282828283, Blast_Score=100, Evalue=3e-22,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): ARGB_SYMTH (Q67KD3)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076709.1 - ProteinModelPortal: Q67KD3 - SMR: Q67KD3 - GeneID: 2982144 - GenomeReviews: AP006840_GR - KEGG: sth:STH2882 - NMPDR: fig|292459.1.peg.2757 - HOGENOM: HBG497643 - OMA: MDIVEMV - BioCyc: STHE292459:STH2882-MONOMER - BRENDA: 2.7.2.8 - GO: GO:0005737 - HAMAP: MF_00082_B - InterPro: IPR004662 - InterPro: IPR001048 - InterPro: IPR001057 - Gene3D: G3DSA:3.40.1160.10 - PIRSF: PIRSF000728 - PRINTS: PR00474 - TIGRFAMs: TIGR00761
Pfam domain/function: PF00696 AA_kinase; SSF53633 Aa_kinase
EC number: =2.7.2.8
Molecular weight: Translated: 30825; Mature: 30825
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: BINDING 87-87 BINDING 188-188
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQQALDKAAVLAEALPYIREFSGKTVVIKYGGAAMAAADLKAAVMQDIALMKYVGMHPI CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCE VVHGGGPEVSELARRMGIEPQFVDGLRVTDAATMEIAQMVLVGKTNREIVTHLCAQGVKA EEECCCCCHHHHHHHHCCCCCHHCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHE VGLSGQDAGLIRAARHLHRSRETGEMVDLGFVGDVAAVDTEVLTTLTTAGYVPVIAPIGV ECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCC GPGGQPYNINADTVAGAIAAAMKAEKLVLLTDVEGVRADKDDPSSLLSRVTAQEVKSWIA CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH RGRLQGGMIPKLQCCLTALEGGVNRVHIIDGRVPHSLLLEIFTDEGVGTMVVK HCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MDQQALDKAAVLAEALPYIREFSGKTVVIKYGGAAMAAADLKAAVMQDIALMKYVGMHPI CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCE VVHGGGPEVSELARRMGIEPQFVDGLRVTDAATMEIAQMVLVGKTNREIVTHLCAQGVKA EEECCCCCHHHHHHHHCCCCCHHCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHE VGLSGQDAGLIRAARHLHRSRETGEMVDLGFVGDVAAVDTEVLTTLTTAGYVPVIAPIGV ECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCC GPGGQPYNINADTVAGAIAAAMKAEKLVLLTDVEGVRADKDDPSSLLSRVTAQEVKSWIA CCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH RGRLQGGMIPKLQCCLTALEGGVNRVHIIDGRVPHSLLLEIFTDEGVGTMVVK HCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA