Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893719

Identifier: 51893719

GI number: 51893719

Start: 2764833

End: 2766446

Strand: Reverse

Name: 51893719

Synonym: STH2581

Alternate gene names: NA

Gene position: 2766446-2764833 (Counterclockwise)

Preceding gene: 51893721

Following gene: 51893718

Centisome position: 77.58

GC content: 77.2

Gene sequence:

>1614_bases
GTGGGACAGGTGCTCTTCTACCGCGCACCCCTGGACAGGCCCGCAGCGGCGCTGCACGTGACGGTGAGCCCGGTGCGCAC
CGCCGTCCTGCCCTCGCTCACGGAAGCCCCCGTCCTTCCCGGTCGGGTGCGGGTGGTGGTGCGGTACGGCCCCCGCACCG
GCCCCGTCGGGGTCCACCGGGGCTGGCTCCACACGGACCTGCCGCCGGCGCGGCGGCTGCGGCTGGCGGGCTGTCAGCAG
GACGACGGCGGGCTCCTGCTGTCGCTGGCCACCGTCCCGACCCGGGCGGGGCGGGAGAGCCTGACGGACCGGTTTCGCCT
GCCTCTCCATATGACGACATGGGGTATCGAAGCGATCTCGGGTGTGCGGGTCGAACTGTTCTGCATTCCGTCCGTCCTGC
CGGGGCGGCTGGTCCTGCGGGGGCGCGCCGCGGTGGCGGTCGAGACGCCCGCGGAGCGACTGGTCCGCGCCGTCCCCTTC
TGCCGGGGGCGCGCTGTGGCGCTGAACCCGCACCTGAGCTGGCGCGCCCGGGCCGCGGTGGAGGGACTGGACCTCCGGGT
GGCGCCGGGCGGCTTGGTGGAAGGCTGGCTCCACGTGGCGGTGGCCTGCTGGGGCGAACCCGAGGAGGCGATGGGGGGGG
CCGCGGCGGCCCCGGCGGATCCCGTGGCGGTGCGCCGGGTGGACGCGGCGATCGCCCGGGTGGAGGCGGAGGCGGTACGG
GACGGGCTGGCGCTGGTGTCCGGCGCCGTGGAGCTGGACGTCGCCTGGGCGGATCGCTCCGGCCGGGGCCGGTGGACCTG
CCGGGCGGTTCCCTTCAGCGCGCTGGTCCCCCTCGCGGGGCTGTGCGAGGGGGACCAGCTGGAGCCGGTGGCCCAGGTGG
AGCAGCTGTCCCGGGTGGGGGCGGGGGCTTCGGCGCGGGCGACGCTGCTTCTGGGGATCGGGCTGACCGCCCTCAGGCCG
GTGCACCGGGAGATCGGCGGTGCGTGGTACCGGATGGCGCAGGTGGTGGGCCAGGCGGTGGCGACGGTGCAGCTGGACGA
GCCGCTCTTTCCCCGGGAGGAGCGATCGGCGCCCACGGAACCGTGGCGGCGGGTACGGCTGGACCTGGGTCAGCACGGGC
CCTGGAAGGCGCTGCGCGCCCGGATCCGGCGCACCTGCGGACGGTCGTCCCTGGAGGTGCAGGGCGAGCCGTTCGGGGCC
GAGTCCGGCGCTGCCACCGGGGTCCGGCTGGAGCTGCCCGGCGGAGCGGATGCCCAGGTGAGCCTGGCAGCGGTCGGCCC
GCAGGCGGAACTGCGGGTTCGTCGGCCGGCACGGGGCGGCGTGGAAGTGCCCCTGCCGCGGGGGACGGGCCGCGGGGGAT
GGCACCTGCTGGCCGGGCCGGCCCGGTGGGTGGTGGACGCATCTCCCTGCGCCGACGGGCTGCGCTGCCTGGTGCGGGAC
GCCGGCGGGCTGCGGCACGTGGTGCTGGTTGCGGAGCGGGAGGCCGGCGGGGAGGCGGCGGAGGACGGGCACGGCCAGGG
GGCTGGCGGGAACCTGCCGGCGGCCTGGACGGTGGCGGGGACGGCGGTGAGGGGGCTGGGCATGGACCGGGTATGGGCGG
AGGTCGAGGGGTGA

Upstream 100 bases:

>100_bases
GTGTGGAGACTACTTCTACGATTTCCTTCTTTTTCCTCTCCAGGAGGAATGATGAAACCGGGTTCTGGCGGATGCCGAAG
GGGCGTATAGGTGCCCTGAG

Downstream 100 bases:

>100_bases
GGGGGTGCAGCGGCAGATGCACCGGCGTTTGGGTGCAAGAGTCGGTACGAAAGTACCATTTCTATCTATAGTAGTTATTG
ATATAATGACTGTCGTAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MGQVLFYRAPLDRPAAALHVTVSPVRTAVLPSLTEAPVLPGRVRVVVRYGPRTGPVGVHRGWLHTDLPPARRLRLAGCQQ
DDGGLLLSLATVPTRAGRESLTDRFRLPLHMTTWGIEAISGVRVELFCIPSVLPGRLVLRGRAAVAVETPAERLVRAVPF
CRGRAVALNPHLSWRARAAVEGLDLRVAPGGLVEGWLHVAVACWGEPEEAMGGAAAAPADPVAVRRVDAAIARVEAEAVR
DGLALVSGAVELDVAWADRSGRGRWTCRAVPFSALVPLAGLCEGDQLEPVAQVEQLSRVGAGASARATLLLGIGLTALRP
VHREIGGAWYRMAQVVGQAVATVQLDEPLFPREERSAPTEPWRRVRLDLGQHGPWKALRARIRRTCGRSSLEVQGEPFGA
ESGAATGVRLELPGGADAQVSLAAVGPQAELRVRRPARGGVEVPLPRGTGRGGWHLLAGPARWVVDASPCADGLRCLVRD
AGGLRHVVLVAEREAGGEAAEDGHGQGAGGNLPAAWTVAGTAVRGLGMDRVWAEVEG

Sequences:

>Translated_537_residues
MGQVLFYRAPLDRPAAALHVTVSPVRTAVLPSLTEAPVLPGRVRVVVRYGPRTGPVGVHRGWLHTDLPPARRLRLAGCQQ
DDGGLLLSLATVPTRAGRESLTDRFRLPLHMTTWGIEAISGVRVELFCIPSVLPGRLVLRGRAAVAVETPAERLVRAVPF
CRGRAVALNPHLSWRARAAVEGLDLRVAPGGLVEGWLHVAVACWGEPEEAMGGAAAAPADPVAVRRVDAAIARVEAEAVR
DGLALVSGAVELDVAWADRSGRGRWTCRAVPFSALVPLAGLCEGDQLEPVAQVEQLSRVGAGASARATLLLGIGLTALRP
VHREIGGAWYRMAQVVGQAVATVQLDEPLFPREERSAPTEPWRRVRLDLGQHGPWKALRARIRRTCGRSSLEVQGEPFGA
ESGAATGVRLELPGGADAQVSLAAVGPQAELRVRRPARGGVEVPLPRGTGRGGWHLLAGPARWVVDASPCADGLRCLVRD
AGGLRHVVLVAEREAGGEAAEDGHGQGAGGNLPAAWTVAGTAVRGLGMDRVWAEVEG
>Mature_536_residues
GQVLFYRAPLDRPAAALHVTVSPVRTAVLPSLTEAPVLPGRVRVVVRYGPRTGPVGVHRGWLHTDLPPARRLRLAGCQQD
DGGLLLSLATVPTRAGRESLTDRFRLPLHMTTWGIEAISGVRVELFCIPSVLPGRLVLRGRAAVAVETPAERLVRAVPFC
RGRAVALNPHLSWRARAAVEGLDLRVAPGGLVEGWLHVAVACWGEPEEAMGGAAAAPADPVAVRRVDAAIARVEAEAVRD
GLALVSGAVELDVAWADRSGRGRWTCRAVPFSALVPLAGLCEGDQLEPVAQVEQLSRVGAGASARATLLLGIGLTALRPV
HREIGGAWYRMAQVVGQAVATVQLDEPLFPREERSAPTEPWRRVRLDLGQHGPWKALRARIRRTCGRSSLEVQGEPFGAE
SGAATGVRLELPGGADAQVSLAAVGPQAELRVRRPARGGVEVPLPRGTGRGGWHLLAGPARWVVDASPCADGLRCLVRDA
GGLRHVVLVAEREAGGEAAEDGHGQGAGGNLPAAWTVAGTAVRGLGMDRVWAEVEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56677; Mature: 56546

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVLFYRAPLDRPAAALHVTVSPVRTAVLPSLTEAPVLPGRVRVVVRYGPRTGPVGVHR
CCCEEEEECCCCCCCEEEEEEECHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
GWLHTDLPPARRLRLAGCQQDDGGLLLSLATVPTRAGRESLTDRFRLPLHMTTWGIEAIS
CCCCCCCCHHHHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCHHHHC
GVRVELFCIPSVLPGRLVLRGRAAVAVETPAERLVRAVPFCRGRAVALNPHLSWRARAAV
CCEEEEEEECCCCCCEEEEECCEEEEEECCHHHHHHHCCCCCCCEEEECCCCCCHHHHHC
EGLDLRVAPGGLVEGWLHVAVACWGEPEEAMGGAAAAPADPVAVRRVDAAIARVEAEAVR
CCCEEEECCCHHHHHHHHEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DGLALVSGAVELDVAWADRSGRGRWTCRAVPFSALVPLAGLCEGDQLEPVAQVEQLSRVG
CCHHHHCCCEEEEEEEECCCCCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
AGASARATLLLGIGLTALRPVHREIGGAWYRMAQVVGQAVATVQLDEPLFPREERSAPTE
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHCCCCCC
PWRRVRLDLGQHGPWKALRARIRRTCGRSSLEVQGEPFGAESGAATGVRLELPGGADAQV
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCEE
SLAAVGPQAELRVRRPARGGVEVPLPRGTGRGGWHLLAGPARWVVDASPCADGLRCLVRD
EEEEECCCCEEEEECCCCCCCEECCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHC
AGGLRHVVLVAEREAGGEAAEDGHGQGAGGNLPAAWTVAGTAVRGLGMDRVWAEVEG
CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCHHHEEECCC
>Mature Secondary Structure 
GQVLFYRAPLDRPAAALHVTVSPVRTAVLPSLTEAPVLPGRVRVVVRYGPRTGPVGVHR
CCEEEEECCCCCCCEEEEEEECHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC
GWLHTDLPPARRLRLAGCQQDDGGLLLSLATVPTRAGRESLTDRFRLPLHMTTWGIEAIS
CCCCCCCCHHHHHEECCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEEECCHHHHC
GVRVELFCIPSVLPGRLVLRGRAAVAVETPAERLVRAVPFCRGRAVALNPHLSWRARAAV
CCEEEEEEECCCCCCEEEEECCEEEEEECCHHHHHHHCCCCCCCEEEECCCCCCHHHHHC
EGLDLRVAPGGLVEGWLHVAVACWGEPEEAMGGAAAAPADPVAVRRVDAAIARVEAEAVR
CCCEEEECCCHHHHHHHHEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DGLALVSGAVELDVAWADRSGRGRWTCRAVPFSALVPLAGLCEGDQLEPVAQVEQLSRVG
CCHHHHCCCEEEEEEEECCCCCCCEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHC
AGASARATLLLGIGLTALRPVHREIGGAWYRMAQVVGQAVATVQLDEPLFPREERSAPTE
CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHCCCCCC
PWRRVRLDLGQHGPWKALRARIRRTCGRSSLEVQGEPFGAESGAATGVRLELPGGADAQV
HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCEE
SLAAVGPQAELRVRRPARGGVEVPLPRGTGRGGWHLLAGPARWVVDASPCADGLRCLVRD
EEEEECCCCEEEEECCCCCCCEECCCCCCCCCCEEEEECCEEEEEECCCHHHHHHHHHHC
AGGLRHVVLVAEREAGGEAAEDGHGQGAGGNLPAAWTVAGTAVRGLGMDRVWAEVEG
CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCCHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA