| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893657
Identifier: 51893657
GI number: 51893657
Start: 2703625
End: 2704656
Strand: Reverse
Name: 51893657
Synonym: STH2519
Alternate gene names: NA
Gene position: 2704656-2703625 (Counterclockwise)
Preceding gene: 51893658
Following gene: 51893656
Centisome position: 75.84
GC content: 63.66
Gene sequence:
>1032_bases ATGCTCACGGAGGTCGCCGTCCCGCACCAACTCCTGGATGACGGGGAGCTGACGGACAGTGCCCGGGTGCTCTGGTGCTA CCTGCGGGCGATCCGAAAGCAGAAGACGCGCCTGACATGGGCCGAACTGCGGCGCGTTACGGGGCTGTCGCAGTACCGTC TGAAGCAGCACATGCGCGCGCTGGATGCCCTTCGGTGGATTCAGCTGGACTCCTTGGGCACGCGCGAGTTCGAGTGCTGC GCCCTGTGGCGCGGCACGCGCGCGTTTACCATCCCCGTGGACCTCGTGCTGGACCGGCGCATCCCCCACGGGGCAAAGTG GCTGTGGGCGCACATCCGGGGGGTGGGTGAGTTCGATTACGCCCAACTCCAGCACGTGATGCGGTGCTCCCGGATCAGCC TGAGGAAGTACGTGCGGATCCTCAGCCATTACGGCTGGCTTGTTGGTGAGGTGGTCCGCGCAGGGCGGTGCAAGGTCTAC CGCTTCGAGACGGTGAACATCATCGACGAAAACCGGCATGCGGACGTGCAGGATTTCTACGAAGGGCTGCGCCTCGCCAG GTTGAAGGAGCGGTACTCCGTAGGCCAATACTTGCTGAAGTGCATCGTCGCGGTGTTGGTCGTCGACCAGCTCCTCATTG AGAACGGCGAGGTGTTGCGGCTGGTCAACCCGTTCACCGGAGGGCAGCTGCACTACGACCTGCTCCTCCCTGTGTCCCGG GTTGCCCTGGAGTTTCAGGGGCCCCAGCATTACCGAACCACGCAGCGTTATCCTTCAGACACGCAACTGCAGGAGCAGAG GATGCGCGATGACATCAAACGCAGGTTCAGCGAGACCCACGGGATCACCCTCATCGAAGTCAGAGCGGATGACCTGAGCT TCGGGACCATCAGCAGCCTGCTGCGGCGGCACAACGTTCCGATCAGACACAGCCTGGATGACCAGCGGCATCTGTGCGAT GCGATCGAGGCAGAGGCGGCGAACTACCGTCGGTGGGCGCAGCGGCTCGAACGGCGGCTCTCCAGTGGATAG
Upstream 100 bases:
>100_bases ACATTCGTGGTCCTGGCCGGCTTCGGGGAGAAGGAAATTATTGGAAGTTGCAAGAATCTGATCATAGAGTGAACCGCGCT TTCCCGAGGTGATGCCTGCC
Downstream 100 bases:
>100_bases GGACAGTCCTGGCCTGCTATCCGCAGTGGCAGGGACCGGCCCGGACGTCGTCCCGGAAAAGGGCTGTCCGGAATTGGACA GCCTCATGACCCTTTGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MLTEVAVPHQLLDDGELTDSARVLWCYLRAIRKQKTRLTWAELRRVTGLSQYRLKQHMRALDALRWIQLDSLGTREFECC ALWRGTRAFTIPVDLVLDRRIPHGAKWLWAHIRGVGEFDYAQLQHVMRCSRISLRKYVRILSHYGWLVGEVVRAGRCKVY RFETVNIIDENRHADVQDFYEGLRLARLKERYSVGQYLLKCIVAVLVVDQLLIENGEVLRLVNPFTGGQLHYDLLLPVSR VALEFQGPQHYRTTQRYPSDTQLQEQRMRDDIKRRFSETHGITLIEVRADDLSFGTISSLLRRHNVPIRHSLDDQRHLCD AIEAEAANYRRWAQRLERRLSSG
Sequences:
>Translated_343_residues MLTEVAVPHQLLDDGELTDSARVLWCYLRAIRKQKTRLTWAELRRVTGLSQYRLKQHMRALDALRWIQLDSLGTREFECC ALWRGTRAFTIPVDLVLDRRIPHGAKWLWAHIRGVGEFDYAQLQHVMRCSRISLRKYVRILSHYGWLVGEVVRAGRCKVY RFETVNIIDENRHADVQDFYEGLRLARLKERYSVGQYLLKCIVAVLVVDQLLIENGEVLRLVNPFTGGQLHYDLLLPVSR VALEFQGPQHYRTTQRYPSDTQLQEQRMRDDIKRRFSETHGITLIEVRADDLSFGTISSLLRRHNVPIRHSLDDQRHLCD AIEAEAANYRRWAQRLERRLSSG >Mature_343_residues MLTEVAVPHQLLDDGELTDSARVLWCYLRAIRKQKTRLTWAELRRVTGLSQYRLKQHMRALDALRWIQLDSLGTREFECC ALWRGTRAFTIPVDLVLDRRIPHGAKWLWAHIRGVGEFDYAQLQHVMRCSRISLRKYVRILSHYGWLVGEVVRAGRCKVY RFETVNIIDENRHADVQDFYEGLRLARLKERYSVGQYLLKCIVAVLVVDQLLIENGEVLRLVNPFTGGQLHYDLLLPVSR VALEFQGPQHYRTTQRYPSDTQLQEQRMRDDIKRRFSETHGITLIEVRADDLSFGTISSLLRRHNVPIRHSLDDQRHLCD AIEAEAANYRRWAQRLERRLSSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40270; Mature: 40270
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTEVAVPHQLLDDGELTDSARVLWCYLRAIRKQKTRLTWAELRRVTGLSQYRLKQHMRA CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHH LDALRWIQLDSLGTREFECCALWRGTRAFTIPVDLVLDRRIPHGAKWLWAHIRGVGEFDY HHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHCCCCCCH AQLQHVMRCSRISLRKYVRILSHYGWLVGEVVRAGRCKVYRFETVNIIDENRHADVQDFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHH EGLRLARLKERYSVGQYLLKCIVAVLVVDQLLIENGEVLRLVNPFTGGQLHYDLLLPVSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHH VALEFQGPQHYRTTQRYPSDTQLQEQRMRDDIKRRFSETHGITLIEVRADDLSFGTISSL HHEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHH LRRHNVPIRHSLDDQRHLCDAIEAEAANYRRWAQRLERRLSSG HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTEVAVPHQLLDDGELTDSARVLWCYLRAIRKQKTRLTWAELRRVTGLSQYRLKQHMRA CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHH LDALRWIQLDSLGTREFECCALWRGTRAFTIPVDLVLDRRIPHGAKWLWAHIRGVGEFDY HHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHCCCCCCH AQLQHVMRCSRISLRKYVRILSHYGWLVGEVVRAGRCKVYRFETVNIIDENRHADVQDFY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHH EGLRLARLKERYSVGQYLLKCIVAVLVVDQLLIENGEVLRLVNPFTGGQLHYDLLLPVSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHH VALEFQGPQHYRTTQRYPSDTQLQEQRMRDDIKRRFSETHGITLIEVRADDLSFGTISSL HHEECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHH LRRHNVPIRHSLDDQRHLCDAIEAEAANYRRWAQRLERRLSSG HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA