| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893645
Identifier: 51893645
GI number: 51893645
Start: 2692170
End: 2693387
Strand: Reverse
Name: 51893645
Synonym: STH2507
Alternate gene names: NA
Gene position: 2693387-2692170 (Counterclockwise)
Preceding gene: 51893646
Following gene: 51893644
Centisome position: 75.53
GC content: 72.09
Gene sequence:
>1218_bases ATGGACCAGATCGACCGCGAACGACTGAAAGAGGTGCTGGAGTTCATCCGTAGCCACGCGCCGCGCCCGGTGCTGAGCAG CCTGGAGGCGGAGCTGGCGGTCATCGAGCAGTACATCGTCAACGCCAGGGCCCCCCGGATCGCCCTGGTGGGCAGGCGGG GGTCGGGCAAGTCCAGCCTGGTCAACGCCATCTTCGGCGCGCCCCTGGCCGAGACCGGTGCGGTGCTCTCCACCACGGCC GCGGGCACCTGGTACCAGTACGAGGGGCCCAACGGGTCGCTGGAGGTGCTGGACACCCGCGGCCTGGGCGAGGGGGAGCG GCCTGCGGGGGCGACGGAGGAGGACGCGGTGGCCGAGAACCTGAAGGCGGTGCGGGACCGCTGCCCCGATGCGATCCTCT TCCTGGTCAAGGCCGTCGACGTGGACGCGTGGATCCAGAACGACTTGGAGCAGGTCGCGGCGCTGCGCGGGGCCATCTCC CGGCGGCACGGGTTTGAGCCGCCGGTGATCGGCGTGCTCACCCAGGTGGACCAGCTTGCCCCGGCCGACGTGGCCGAGCC GCCCTACGACGACCCGGAGAAGCGGGCCAACATCCGGCTGGCCCTGGAGAAGCTGGCGGAGCGGATGGAGCGGCTGCTGG ACCGGCCGGTCCGGGTCTTCGCCACCTCCGCCTACATGCGCTACCGGGACGGCGTGCGGGTGGTGGACCGCCGGTGGGGG ATCGATGAGCTGGTCTCCTACCTGGTGGAGACGCTGCCCGGCGAGGCGCAGCTCACCATGGGCCGGGTGGCCGGCGTCAA GGCGGCCCAGACCAAGATCGCCGGCGCCCTCATCCAGTCCACCGCCTCCGCGGCCGCGGCGGTGGCCGCGACGCCGATCC CGCTCGCGGACATGCCGATCCTCACCGGCATGCAGGTGCTCATGGTCACCGGCATCGCCTACCTGGCGGGCCGGCGGCTG TCCCGGGAGGCGGCCCTGGAGTTCATCGGCGCCCTGGGGGTGAACGTGGGCGCGGGCTTCGCCCTGCGGGAGCTGGCCCG GGGGCTCTCCAAGTGGTTGCTGCCCGGCGGCGGGTCGCTGGTCTCGGCCGGCGTCGCGTACTGGGGCACCTACGGCCTCG GCCAGGCCGCGGTGGCGTACTACATCGAGAACCAGCCCATCGAGGCGGCCCGGAAGCTGCTGGAGCAGAGCCGGGACAGA ATCGTAAAGAAGCCGTAA
Upstream 100 bases:
>100_bases CACCGCCGCGGGCCGGGCGTTCCGTCTCCGGGCAGGGATCATCGGTTCTCACCAAGAAATTTCGGGGACGACACAGATCC TGACGCGGAGGAGGCCCCCG
Downstream 100 bases:
>100_bases GGTTTGCGTTCCGCCTGCCGTAAGAACCGCGCGGTAGGCTGGCGTACAGGACGAGGTGACGGTGGATGGCGGAGCCGCTG ATCCTGGTCGTGGACGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MDQIDRERLKEVLEFIRSHAPRPVLSSLEAELAVIEQYIVNARAPRIALVGRRGSGKSSLVNAIFGAPLAETGAVLSTTA AGTWYQYEGPNGSLEVLDTRGLGEGERPAGATEEDAVAENLKAVRDRCPDAILFLVKAVDVDAWIQNDLEQVAALRGAIS RRHGFEPPVIGVLTQVDQLAPADVAEPPYDDPEKRANIRLALEKLAERMERLLDRPVRVFATSAYMRYRDGVRVVDRRWG IDELVSYLVETLPGEAQLTMGRVAGVKAAQTKIAGALIQSTASAAAAVAATPIPLADMPILTGMQVLMVTGIAYLAGRRL SREAALEFIGALGVNVGAGFALRELARGLSKWLLPGGGSLVSAGVAYWGTYGLGQAAVAYYIENQPIEAARKLLEQSRDR IVKKP
Sequences:
>Translated_405_residues MDQIDRERLKEVLEFIRSHAPRPVLSSLEAELAVIEQYIVNARAPRIALVGRRGSGKSSLVNAIFGAPLAETGAVLSTTA AGTWYQYEGPNGSLEVLDTRGLGEGERPAGATEEDAVAENLKAVRDRCPDAILFLVKAVDVDAWIQNDLEQVAALRGAIS RRHGFEPPVIGVLTQVDQLAPADVAEPPYDDPEKRANIRLALEKLAERMERLLDRPVRVFATSAYMRYRDGVRVVDRRWG IDELVSYLVETLPGEAQLTMGRVAGVKAAQTKIAGALIQSTASAAAAVAATPIPLADMPILTGMQVLMVTGIAYLAGRRL SREAALEFIGALGVNVGAGFALRELARGLSKWLLPGGGSLVSAGVAYWGTYGLGQAAVAYYIENQPIEAARKLLEQSRDR IVKKP >Mature_405_residues MDQIDRERLKEVLEFIRSHAPRPVLSSLEAELAVIEQYIVNARAPRIALVGRRGSGKSSLVNAIFGAPLAETGAVLSTTA AGTWYQYEGPNGSLEVLDTRGLGEGERPAGATEEDAVAENLKAVRDRCPDAILFLVKAVDVDAWIQNDLEQVAALRGAIS RRHGFEPPVIGVLTQVDQLAPADVAEPPYDDPEKRANIRLALEKLAERMERLLDRPVRVFATSAYMRYRDGVRVVDRRWG IDELVSYLVETLPGEAQLTMGRVAGVKAAQTKIAGALIQSTASAAAAVAATPIPLADMPILTGMQVLMVTGIAYLAGRRL SREAALEFIGALGVNVGAGFALRELARGLSKWLLPGGGSLVSAGVAYWGTYGLGQAAVAYYIENQPIEAARKLLEQSRDR IVKKP
Specific function: Unknown
COG id: COG3597
COG function: function code S; Uncharacterized protein/domain associated with GTPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43586; Mature: 43586
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQIDRERLKEVLEFIRSHAPRPVLSSLEAELAVIEQYIVNARAPRIALVGRRGSGKSSL CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH VNAIFGAPLAETGAVLSTTAAGTWYQYEGPNGSLEVLDTRGLGEGERPAGATEEDAVAEN HHHHHCCCHHHCCCHHEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH LKAVRDRCPDAILFLVKAVDVDAWIQNDLEQVAALRGAISRRHGFEPPVIGVLTQVDQLA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC PADVAEPPYDDPEKRANIRLALEKLAERMERLLDRPVRVFATSAYMRYRDGVRVVDRRWG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCC IDELVSYLVETLPGEAQLTMGRVAGVKAAQTKIAGALIQSTASAAAAVAATPIPLADMPI HHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH LTGMQVLMVTGIAYLAGRRLSREAALEFIGALGVNVGAGFALRELARGLSKWLLPGGGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH VSAGVAYWGTYGLGQAAVAYYIENQPIEAARKLLEQSRDRIVKKP HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDQIDRERLKEVLEFIRSHAPRPVLSSLEAELAVIEQYIVNARAPRIALVGRRGSGKSSL CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH VNAIFGAPLAETGAVLSTTAAGTWYQYEGPNGSLEVLDTRGLGEGERPAGATEEDAVAEN HHHHHCCCHHHCCCHHEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH LKAVRDRCPDAILFLVKAVDVDAWIQNDLEQVAALRGAISRRHGFEPPVIGVLTQVDQLA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC PADVAEPPYDDPEKRANIRLALEKLAERMERLLDRPVRVFATSAYMRYRDGVRVVDRRWG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHCCC IDELVSYLVETLPGEAQLTMGRVAGVKAAQTKIAGALIQSTASAAAAVAATPIPLADMPI HHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH LTGMQVLMVTGIAYLAGRRLSREAALEFIGALGVNVGAGFALRELARGLSKWLLPGGGSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHH VSAGVAYWGTYGLGQAAVAYYIENQPIEAARKLLEQSRDRIVKKP HHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA