| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893582
Identifier: 51893582
GI number: 51893582
Start: 2632373
End: 2633098
Strand: Reverse
Name: 51893582
Synonym: STH2444
Alternate gene names: NA
Gene position: 2633098-2632373 (Counterclockwise)
Preceding gene: 51893583
Following gene: 51893581
Centisome position: 73.84
GC content: 66.25
Gene sequence:
>726_bases GTGTTTCGCCGGCGACAGCGCGGCAGCCGGCAAGTTGCGGACGTGACGGGAGGACCTGGATTGGGCAAGGTGACCTTCGA ACAGGTGCGGCAGGATCCGGAGGTGCGCGCCTACATCGTGAAGGCCAACGAGATGCTGGCGGCCATCGGCTTCACCGAGC ACGGGCTGCGGCACGTGGGGCTGGTCGCCGACCGGGCGATGGGGCTCATGGCGGAGCTGGACCGGCCGCCGCGCCTGCGG GAGCTGGCGGGCATCGCCGCCCTGCTCCACGACATCGGCAACATCGTCAACAGGCAGGGCCACGGGCAGACCAGCGCCCT GCTGGCTCATCACATCCTGAGCCGGATGGGGATGGCGCCCGAGGAGATCGCCATCATCATGTCGGCCATCGGCAACCACG AGGAGGAGATCGGCAACCCGGTACACGACGTCTCTGCCGCGCTGATCCTGGCCGACAAGTCCGATGTGCATCGCACCCGG GTCTACAACCGGGACGTGGCCACCTTCGACATCCACGACCGGGTCAACTGCGCGGTCACCCACAGCGAGCTGCACGCCTT TCCGGCCGAAAAGGTGATCCGGCTCAGCCTCACGGTCGACACCTCGATCATCGCGATCATGGAGTACTTCGAGATTTTCC TCAGCCGCATGATCATGTGCCGGCGGGCGGCGGCCCATCTGGGCTGCCAGTTCCAGCTGGTGATGAACGAAAACCGGCTG CTGTAG
Upstream 100 bases:
>100_bases CGCTGGTGTGGCCGCCGGTGCGGATCGGGGATCACGGACCGCTGGCGGCGGCGCGGACGTACCGCTAGACCCGCCGGGCC CATGGGGCCCAGGCGGCCGG
Downstream 100 bases:
>100_bases TGGTGATTTTCTTTGACTCACCATAGGGCCCGCCGTAAAATGGAAGAGGTCGCGGGCAGGAACGGTTGAAATAGGGGGAT ATTGCTGAGGGCGGGCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: HDIG Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Sub Domain
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MFRRRQRGSRQVADVTGGPGLGKVTFEQVRQDPEVRAYIVKANEMLAAIGFTEHGLRHVGLVADRAMGLMAELDRPPRLR ELAGIAALLHDIGNIVNRQGHGQTSALLAHHILSRMGMAPEEIAIIMSAIGNHEEEIGNPVHDVSAALILADKSDVHRTR VYNRDVATFDIHDRVNCAVTHSELHAFPAEKVIRLSLTVDTSIIAIMEYFEIFLSRMIMCRRAAAHLGCQFQLVMNENRL L
Sequences:
>Translated_241_residues MFRRRQRGSRQVADVTGGPGLGKVTFEQVRQDPEVRAYIVKANEMLAAIGFTEHGLRHVGLVADRAMGLMAELDRPPRLR ELAGIAALLHDIGNIVNRQGHGQTSALLAHHILSRMGMAPEEIAIIMSAIGNHEEEIGNPVHDVSAALILADKSDVHRTR VYNRDVATFDIHDRVNCAVTHSELHAFPAEKVIRLSLTVDTSIIAIMEYFEIFLSRMIMCRRAAAHLGCQFQLVMNENRL L >Mature_241_residues MFRRRQRGSRQVADVTGGPGLGKVTFEQVRQDPEVRAYIVKANEMLAAIGFTEHGLRHVGLVADRAMGLMAELDRPPRLR ELAGIAALLHDIGNIVNRQGHGQTSALLAHHILSRMGMAPEEIAIIMSAIGNHEEEIGNPVHDVSAALILADKSDVHRTR VYNRDVATFDIHDRVNCAVTHSELHAFPAEKVIRLSLTVDTSIIAIMEYFEIFLSRMIMCRRAAAHLGCQFQLVMNENRL L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26811; Mature: 26811
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRRQRGSRQVADVTGGPGLGKVTFEQVRQDPEVRAYIVKANEMLAAIGFTEHGLRHVG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHHHH LVADRAMGLMAELDRPPRLRELAGIAALLHDIGNIVNRQGHGQTSALLAHHILSRMGMAP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH EEIAIIMSAIGNHEEEIGNPVHDVSAALILADKSDVHRTRVYNRDVATFDIHDRVNCAVT HHHHHHHHHHCCCHHHHCCHHHHHHHEEEEECCCHHHHHHHHCCCCEEEECCCCCEEEEE HSELHAFPAEKVIRLSLTVDTSIIAIMEYFEIFLSRMIMCRRAAAHLGCQFQLVMNENRL HHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC L C >Mature Secondary Structure MFRRRQRGSRQVADVTGGPGLGKVTFEQVRQDPEVRAYIVKANEMLAAIGFTEHGLRHVG CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHCCHHHHHHHHH LVADRAMGLMAELDRPPRLRELAGIAALLHDIGNIVNRQGHGQTSALLAHHILSRMGMAP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCH EEIAIIMSAIGNHEEEIGNPVHDVSAALILADKSDVHRTRVYNRDVATFDIHDRVNCAVT HHHHHHHHHHCCCHHHHCCHHHHHHHEEEEECCCHHHHHHHHCCCCEEEECCCCCEEEEE HSELHAFPAEKVIRLSLTVDTSIIAIMEYFEIFLSRMIMCRRAAAHLGCQFQLVMNENRL HHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA