| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893567
Identifier: 51893567
GI number: 51893567
Start: 2612950
End: 2613264
Strand: Reverse
Name: 51893567
Synonym: STH2429
Alternate gene names: NA
Gene position: 2613264-2612950 (Counterclockwise)
Preceding gene: 51893568
Following gene: 51893566
Centisome position: 73.28
GC content: 68.57
Gene sequence:
>315_bases ATGGCACCCTGGACCGACGACCTGGTCTACCGTGTTCAGGCCCTGGCCGAACTGGCTGACGACCTCCACAACCGTCTGGC CCAAGTGGAGGCAGGCCTGGAGCGGCAGCGGGCGGAAAGCGCCCGCCTCTGGGCCGAGCACCGGGAGGTGGTGGCCGAGA TGCGCGCGGCCCTGCTGCCCCTGAAGTCGCGGATCGGCTTCGTCGAGGGGCGGCTGGACGGCAAGAAAGAGACGGCCAGC CTCCTGATCAGCTCATTCCTTTCGGCCGTGGCCGTCCTCGTGTCGGCGCTCCTGGGCATCCTCAACCTGCAGTGA
Upstream 100 bases:
>100_bases TCTGATCCCGCTCACTGAGAGGTAAAACCTTACAGATCTATGGCCTGTCCGGTTCGTCTCCGGTACCATTAAGAAAAGGG TACAGCGGAGGTGGATCGGT
Downstream 100 bases:
>100_bases CGTTCCGCGGCATCAGTGCCGCCACGCCCCGACTTGCGTCGGGGGCCAAACCGCCTATACTGGAAGTAGAGACGGCAACA CCTGCCGGGACCTCGTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MAPWTDDLVYRVQALAELADDLHNRLAQVEAGLERQRAESARLWAEHREVVAEMRAALLPLKSRIGFVEGRLDGKKETAS LLISSFLSAVAVLVSALLGILNLQ
Sequences:
>Translated_104_residues MAPWTDDLVYRVQALAELADDLHNRLAQVEAGLERQRAESARLWAEHREVVAEMRAALLPLKSRIGFVEGRLDGKKETAS LLISSFLSAVAVLVSALLGILNLQ >Mature_103_residues APWTDDLVYRVQALAELADDLHNRLAQVEAGLERQRAESARLWAEHREVVAEMRAALLPLKSRIGFVEGRLDGKKETASL LISSFLSAVAVLVSALLGILNLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11463; Mature: 11332
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPWTDDLVYRVQALAELADDLHNRLAQVEAGLERQRAESARLWAEHREVVAEMRAALLP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKSRIGFVEGRLDGKKETASLLISSFLSAVAVLVSALLGILNLQ HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure APWTDDLVYRVQALAELADDLHNRLAQVEAGLERQRAESARLWAEHREVVAEMRAALLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKSRIGFVEGRLDGKKETASLLISSFLSAVAVLVSALLGILNLQ HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA