| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is dagK [H]
Identifier: 51893562
GI number: 51893562
Start: 2608672
End: 2609556
Strand: Reverse
Name: dagK [H]
Synonym: STH2424
Alternate gene names: 51893562
Gene position: 2609556-2608672 (Counterclockwise)
Preceding gene: 51893563
Following gene: 51893561
Centisome position: 73.18
GC content: 72.66
Gene sequence:
>885_bases ATGGCCTTCCGGCGCATTGCGGTCATCTACAATCCGGCCTCCGGGCGGCCCCGGGAGCGGGAGGAGCCGCTGGCCCGGCT GGCGGCGCCCCTGCGCGCAGCCGGCTGCGAGGTGGCCATCTGCCCCACGGCGCGGCCCGGCCACGCGACCGAGATCGCGC AGGCGAGGGCCGGGGAAGGGTACGACCTGATCCTCGCCCACGGCGGCGACGGCACCATGAACGAGGCGCTGCAGGGGGTG ATGGGCACCGGGGCGGCTCTGGGCTTCTGGCCCGGCGGCACCGCGAACGTGCTGGCCGCCGAGCTGCACCTTCCGCACCG GCCGGAGGAGATGGCCAGGCGGATCCGCGACGGGCGGACCGCGGAGGTGACGGTGGGCCGGGCCAACGACCGGTACTTCC TGCTGATGGCCGGGGTCGGCCTGGACGCGGCGGTGGCCGGTTCGGTGGATCCCGAGCTCAAGCGCCGGTTTGGGAAGGCG GCCTTCTTCGTGGCCGCCATGCAGTTCATCTGGCGGTGGGAGCTGGCGCCGTTCGTCGTGCACCTGGACGGCGAGCCGCC GGTGGAGGGCCGGTTCGTGGTGGCGGGCAACGCCCGCTCCTACGGTGGCGGCTTCCAGTTCACGCCGGACGCCTCCCTCA CCGACCCTGACCTGGACGTCTGCATCTTCACCGCAGAGGCGGTGGGAGACTACCTGCGCTACGTCTCGGCCGCGCTGGTG GGGCTGCACCGGAACCTGCCCGGGGTGATCTACCGCAAGGCGCGCAGGGTGTCGATTACGGCGGCCGCCGAACACGCCCC CCTCACCCAGGTGGACGGCGAGGTCATCGGCAGCCTGCCGGTGACCCTGGAGTCGATTCCGCGGGCCCTGAGACTTTTGG TTTAG
Upstream 100 bases:
>100_bases CCCCAACGACCCGCAGGCGTACGTGGAGCGGGTCGAGGAGCTGGCCCGGCGGAAGGTCGCGGAGCTCAGGCTGCTCTACG GCGAGTAGGGGGTGGCGCGC
Downstream 100 bases:
>100_bases GGTATTGACAGCCCGTGGCCAGAGAAGTAGAATCCAGGATCAAAGGCGATGACAGGGAGCAGGGCTCCGCACGGGCCCCC TGCAGAGAGCCGGCCCTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: DAG kinase; DAGK [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MAFRRIAVIYNPASGRPREREEPLARLAAPLRAAGCEVAICPTARPGHATEIAQARAGEGYDLILAHGGDGTMNEALQGV MGTGAALGFWPGGTANVLAAELHLPHRPEEMARRIRDGRTAEVTVGRANDRYFLLMAGVGLDAAVAGSVDPELKRRFGKA AFFVAAMQFIWRWELAPFVVHLDGEPPVEGRFVVAGNARSYGGGFQFTPDASLTDPDLDVCIFTAEAVGDYLRYVSAALV GLHRNLPGVIYRKARRVSITAAAEHAPLTQVDGEVIGSLPVTLESIPRALRLLV
Sequences:
>Translated_294_residues MAFRRIAVIYNPASGRPREREEPLARLAAPLRAAGCEVAICPTARPGHATEIAQARAGEGYDLILAHGGDGTMNEALQGV MGTGAALGFWPGGTANVLAAELHLPHRPEEMARRIRDGRTAEVTVGRANDRYFLLMAGVGLDAAVAGSVDPELKRRFGKA AFFVAAMQFIWRWELAPFVVHLDGEPPVEGRFVVAGNARSYGGGFQFTPDASLTDPDLDVCIFTAEAVGDYLRYVSAALV GLHRNLPGVIYRKARRVSITAAAEHAPLTQVDGEVIGSLPVTLESIPRALRLLV >Mature_293_residues AFRRIAVIYNPASGRPREREEPLARLAAPLRAAGCEVAICPTARPGHATEIAQARAGEGYDLILAHGGDGTMNEALQGVM GTGAALGFWPGGTANVLAAELHLPHRPEEMARRIRDGRTAEVTVGRANDRYFLLMAGVGLDAAVAGSVDPELKRRFGKAA FFVAAMQFIWRWELAPFVVHLDGEPPVEGRFVVAGNARSYGGGFQFTPDASLTDPDLDVCIFTAEAVGDYLRYVSAALVG LHRNLPGVIYRKARRVSITAAAEHAPLTQVDGEVIGSLPVTLESIPRALRLLV
Specific function: Catalyzes the phosphorylation of diacylglycerol (DAG) into phosphatidic acid. Is a key enzyme involved in the production of lipoteichoic acid by reintroducing DAG formed from the breakdown of membrane phospholipids into the phosphatidylglycerol biosynthet
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DAGKc domain [H]
Homologues:
Organism=Escherichia coli, GI1788402, Length=279, Percent_Identity=25.4480286738351, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017438 - InterPro: IPR005218 - InterPro: IPR001206 [H]
Pfam domain/function: PF00781 DAGK_cat [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 31473; Mature: 31342
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRRIAVIYNPASGRPREREEPLARLAAPLRAAGCEVAICPTARPGHATEIAQARAGEG CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCC YDLILAHGGDGTMNEALQGVMGTGAALGFWPGGTANVLAAELHLPHRPEEMARRIRDGRT EEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHEEEEEECCCCCHHHHHHHHHCCCE AEVTVGRANDRYFLLMAGVGLDAAVAGSVDPELKRRFGKAAFFVAAMQFIWRWELAPFVV EEEEEECCCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE HLDGEPPVEGRFVVAGNARSYGGGFQFTPDASLTDPDLDVCIFTAEAVGDYLRYVSAALV EECCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH GLHRNLPGVIYRKARRVSITAAAEHAPLTQVDGEVIGSLPVTLESIPRALRLLV HHHCCCCHHHHHHCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure AFRRIAVIYNPASGRPREREEPLARLAAPLRAAGCEVAICPTARPGHATEIAQARAGEG CCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHCCCC YDLILAHGGDGTMNEALQGVMGTGAALGFWPGGTANVLAAELHLPHRPEEMARRIRDGRT EEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHEEEEEECCCCCHHHHHHHHHCCCE AEVTVGRANDRYFLLMAGVGLDAAVAGSVDPELKRRFGKAAFFVAAMQFIWRWELAPFVV EEEEEECCCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE HLDGEPPVEGRFVVAGNARSYGGGFQFTPDASLTDPDLDVCIFTAEAVGDYLRYVSAALV EECCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH GLHRNLPGVIYRKARRVSITAAAEHAPLTQVDGEVIGSLPVTLESIPRALRLLV HHHCCCCHHHHHHCCEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]