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The map label for this gene is ygaJ [H]

Identifier: 51893561

GI number: 51893561

Start: 2607558

End: 2608298

Strand: Reverse

Name: ygaJ [H]

Synonym: STH2423

Alternate gene names: 51893561

Gene position: 2608298-2607558 (Counterclockwise)

Preceding gene: 51893562

Following gene: 51893560

Centisome position: 73.14

GC content: 68.96

Gene sequence:

>741_bases
ATGAAGCAGATTGTGGCGATGGGCGGCGGCGGCTTCTCCATGGAACCGGAGAACCCGCTCCTGGATCGGTACGTGTTGGG
CCTCACCGGCAAGGCCCGGCCGAAGGTCTGCTTCCTGCCGACGGCCAGTGGCGACGCGGAGGGCTACATCGTCAACTTCT
ACCGGGCGATGACCCAGCTCGGCGCGGAGCCGACGCATCTCTCGCTCCTGCGGCCGACGGTGCGGGACATGGCCGCCCTC
CTGCTGGTCCAGGACGTGATCTACGTGGGCGGCGGCAACACCAAGAACATGCTGGCCCTGTGGCGGGAGTGGGAGCTGGA
CCAGGTGCTGCACACCGCCTGGGAGCAGGGCATCATCCTGGCGGGGCTGAGCGCCGGCTCCATCTGCTGGTTCGAGCAGG
GCGTGACCGACTCGATCCCCGGCGAGCTGACCGCCCTTCCGGGGCTGGGTTTCCTGAAGGGCAGCAACTGCCCGCACTAC
GATGGCGAGCCCGAGCGCCGGCCGGCCTACCATCGGCTGCGCAAGGCCGGGGTGCTGAGCGACGGCATCGCGGCGGACGA
CGGCGTGGCCCTGCACTACGTCGGCGAGCACCTGTTCAAGGTGGTCTCCTCCCGGCCCGGGGCCAGAGCCTACTGGGTCT
ACGCCGTAAACGGCGAGGTGCGGGAGGAGCCGATCGACCCGGTCTACCTCGGGGAGAGCGAGCCCCTCACAACAACCGGA
CGAGGAGAGGATCGAGCGTGA

Upstream 100 bases:

>100_bases
TGCCCGCAGGTGGGCATCAACGTGGGTGGCACCGCGAGCGCATGCGCTCGTCCCATGCGGGACGGGCGCTGTTTTTTATC
CCGACAAGGAGGGGGCACGG

Downstream 100 bases:

>100_bases
GCATCCAGGCGCCGCGGGGATTCAACGACATCCTCCCGGGCGAGCAGTACGGTTGGCGGGACTCCTACCGCTGGCAGCGG
CTGGAGGAGATCTTCCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKQIVAMGGGGFSMEPENPLLDRYVLGLTGKARPKVCFLPTASGDAEGYIVNFYRAMTQLGAEPTHLSLLRPTVRDMAAL
LLVQDVIYVGGGNTKNMLALWREWELDQVLHTAWEQGIILAGLSAGSICWFEQGVTDSIPGELTALPGLGFLKGSNCPHY
DGEPERRPAYHRLRKAGVLSDGIAADDGVALHYVGEHLFKVVSSRPGARAYWVYAVNGEVREEPIDPVYLGESEPLTTTG
RGEDRA

Sequences:

>Translated_246_residues
MKQIVAMGGGGFSMEPENPLLDRYVLGLTGKARPKVCFLPTASGDAEGYIVNFYRAMTQLGAEPTHLSLLRPTVRDMAAL
LLVQDVIYVGGGNTKNMLALWREWELDQVLHTAWEQGIILAGLSAGSICWFEQGVTDSIPGELTALPGLGFLKGSNCPHY
DGEPERRPAYHRLRKAGVLSDGIAADDGVALHYVGEHLFKVVSSRPGARAYWVYAVNGEVREEPIDPVYLGESEPLTTTG
RGEDRA
>Mature_246_residues
MKQIVAMGGGGFSMEPENPLLDRYVLGLTGKARPKVCFLPTASGDAEGYIVNFYRAMTQLGAEPTHLSLLRPTVRDMAAL
LLVQDVIYVGGGNTKNMLALWREWELDQVLHTAWEQGIILAGLSAGSICWFEQGVTDSIPGELTALPGLGFLKGSNCPHY
DGEPERRPAYHRLRKAGVLSDGIAADDGVALHYVGEHLFKVVSSRPGARAYWVYAVNGEVREEPIDPVYLGESEPLTTTG
RGEDRA

Specific function: Unknown

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: NA

Molecular weight: Translated: 26756; Mature: 26756

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIVAMGGGGFSMEPENPLLDRYVLGLTGKARPKVCFLPTASGDAEGYIVNFYRAMTQL
CCEEEEECCCCCCCCCCCCHHHHHEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
GAEPTHLSLLRPTVRDMAALLLVQDVIYVGGGNTKNMLALWREWELDQVLHTAWEQGIIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCHHHHHHHHHHCCEEE
AGLSAGSICWFEQGVTDSIPGELTALPGLGFLKGSNCPHYDGEPERRPAYHRLRKAGVLS
EECCCCCEEEECCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCC
DGIAADDGVALHYVGEHLFKVVSSRPGARAYWVYAVNGEVREEPIDPVYLGESEPLTTTG
CCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCEECC
RGEDRA
CCCCCC
>Mature Secondary Structure
MKQIVAMGGGGFSMEPENPLLDRYVLGLTGKARPKVCFLPTASGDAEGYIVNFYRAMTQL
CCEEEEECCCCCCCCCCCCHHHHHEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
GAEPTHLSLLRPTVRDMAALLLVQDVIYVGGGNTKNMLALWREWELDQVLHTAWEQGIIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCHHHHHHHHHHCCEEE
AGLSAGSICWFEQGVTDSIPGELTALPGLGFLKGSNCPHYDGEPERRPAYHRLRKAGVLS
EECCCCCEEEECCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCCCC
DGIAADDGVALHYVGEHLFKVVSSRPGARAYWVYAVNGEVREEPIDPVYLGESEPLTTTG
CCCCCCCCEEHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCEECC
RGEDRA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]