Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893549

Identifier: 51893549

GI number: 51893549

Start: 2593492

End: 2594745

Strand: Reverse

Name: 51893549

Synonym: STH2411

Alternate gene names: NA

Gene position: 2594745-2593492 (Counterclockwise)

Preceding gene: 51893550

Following gene: 51893548

Centisome position: 72.76

GC content: 72.57

Gene sequence:

>1254_bases
ATGAAGTTCGCAATCCTCGCCACTGGTACCCGGGGCGATATCCAGCCCTTCGTGGCCCTGGCACAGGGTTTCTCCGCTGC
CGGACACGAGGCGGTGCTGGCTGCCCCTCGCGCCTTCGAGTCCTTCGTTCGGAGTTACGGCGTTGACTTCTTCCCCATGG
GCAGCGACTTCACAGCCCTACTGGAGTCGCCCGAGGGCAAGGCGGCCCTCCGGGAGAACCCGATCAAGACGATGCAGGCG
GTCAGGCAGACCGTCATCCCCATGATGCGCCGCATGCTGGATGACGCCTGGGCGGCGGTGCAGGGGGCGGATGCCATCAT
CTACCATCCCAAGGCGTTGGCTGGCGTCCACCTGGCCGAGCGGCTGCGGGTGCCCTGCTTCATCGGGGCGCCGGTGCCGG
TCGTTGTGCCCACGGCGACGTTTCCGGCACCCGCCTTCGTCAGCCGGGACCTGGGCGGCTTCCTGAACCGGCTCACCTAC
GCCGCCGTGCGTTCGGGCACCCGCCCGTTCCGGAAGATGATCGACGCGTGGCGCCGGGAAGTGCTGGGCCTGGGGCCGCG
CCGTGAGGATGAGTTCACGCAGGGCGGCCAGCCGGTTCCGGTGCTGCACGCCTTCAGCCGCCACGTCGTGCCGCCGCCCG
CCGACTGGCCGCCCGAGGCGGTCGTCACGGGCTACTGGTTCGCCAGGCGGGTTCAGGTCTGGCATCCCCCGGAGGCTCTG
TCCGCCTTCCTCGAGGCCGGGCCTCCCCCGGTGTACGTCGGGTTCGGGTCGGTCGCGGGCCTGGACCGGGACGAGGGCAC
CCGGATGGCGCTGGAGGCCCTCAGCCAGGCTGGCGTGCGGGGCATCCTCGCCACGGGAAGCGGCGACGGGCCGAGACTCC
TCTCCCCGGACGTCCTCGCCATCCCCGAGGCGCCCCACGACTGGCTCTTCCCGCGGGTAGCCGCGGTGGTCCACCACGGC
GGTGCAGGCACGGTCGCGCCCGGGCTGGCCGCGGGCAAGCCGACCCTGGTCTGTCCGGCCACCACGGACCAGCCCTTCTG
GGGCCGGGTGGTGCATCAACTGGGCGTCGGCCCCGCGCCGATTCCCCGGAGGCAGCTCACCGCCGAGCGGCTGGCGGAGG
CGGTTCGGGCCGCGACCGGAGACCCGGAGATGCAGCGCCGGGCCGCCGCCCTGGGCGAGGCGATCCGGGCGGAGGACGGC
GTCGCACAAGCGGTGGCGGAGATCCTGCGGCGGGTCGGTGCACTGGCCGGATGA

Upstream 100 bases:

>100_bases
GGCGTGGCCATCCCAGGCGGGGCCACAATTTATGGTAAGCTATTGCTGTGCATGACTCAGATCGCGGGGCGCCCGCAGCA
TGACCGAGGAGGACCGGCCG

Downstream 100 bases:

>100_bases
AAGCTGGTCGAACGTGAGGCCGGCGCGGGGGCTGCGGTGGAGATGGCATCTTCGCCCGGAGGGACGGCCTGCTCAGCCCG
TCGTCCAGCGGTGCGCAGAG

Product: UDP-glucose:sterol glucosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MKFAILATGTRGDIQPFVALAQGFSAAGHEAVLAAPRAFESFVRSYGVDFFPMGSDFTALLESPEGKAALRENPIKTMQA
VRQTVIPMMRRMLDDAWAAVQGADAIIYHPKALAGVHLAERLRVPCFIGAPVPVVVPTATFPAPAFVSRDLGGFLNRLTY
AAVRSGTRPFRKMIDAWRREVLGLGPRREDEFTQGGQPVPVLHAFSRHVVPPPADWPPEAVVTGYWFARRVQVWHPPEAL
SAFLEAGPPPVYVGFGSVAGLDRDEGTRMALEALSQAGVRGILATGSGDGPRLLSPDVLAIPEAPHDWLFPRVAAVVHHG
GAGTVAPGLAAGKPTLVCPATTDQPFWGRVVHQLGVGPAPIPRRQLTAERLAEAVRAATGDPEMQRRAAALGEAIRAEDG
VAQAVAEILRRVGALAG

Sequences:

>Translated_417_residues
MKFAILATGTRGDIQPFVALAQGFSAAGHEAVLAAPRAFESFVRSYGVDFFPMGSDFTALLESPEGKAALRENPIKTMQA
VRQTVIPMMRRMLDDAWAAVQGADAIIYHPKALAGVHLAERLRVPCFIGAPVPVVVPTATFPAPAFVSRDLGGFLNRLTY
AAVRSGTRPFRKMIDAWRREVLGLGPRREDEFTQGGQPVPVLHAFSRHVVPPPADWPPEAVVTGYWFARRVQVWHPPEAL
SAFLEAGPPPVYVGFGSVAGLDRDEGTRMALEALSQAGVRGILATGSGDGPRLLSPDVLAIPEAPHDWLFPRVAAVVHHG
GAGTVAPGLAAGKPTLVCPATTDQPFWGRVVHQLGVGPAPIPRRQLTAERLAEAVRAATGDPEMQRRAAALGEAIRAEDG
VAQAVAEILRRVGALAG
>Mature_417_residues
MKFAILATGTRGDIQPFVALAQGFSAAGHEAVLAAPRAFESFVRSYGVDFFPMGSDFTALLESPEGKAALRENPIKTMQA
VRQTVIPMMRRMLDDAWAAVQGADAIIYHPKALAGVHLAERLRVPCFIGAPVPVVVPTATFPAPAFVSRDLGGFLNRLTY
AAVRSGTRPFRKMIDAWRREVLGLGPRREDEFTQGGQPVPVLHAFSRHVVPPPADWPPEAVVTGYWFARRVQVWHPPEAL
SAFLEAGPPPVYVGFGSVAGLDRDEGTRMALEALSQAGVRGILATGSGDGPRLLSPDVLAIPEAPHDWLFPRVAAVVHHG
GAGTVAPGLAAGKPTLVCPATTDQPFWGRVVHQLGVGPAPIPRRQLTAERLAEAVRAATGDPEMQRRAAALGEAIRAEDG
VAQAVAEILRRVGALAG

Specific function: Unknown

COG id: COG1819

COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae L518_C2_147 and M.tuberculosis Rv1524 [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323218, Length=435, Percent_Identity=31.7241379310345, Blast_Score=214, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004276 [H]

Pfam domain/function: PF03033 Glyco_transf_28 [H]

EC number: NA

Molecular weight: Translated: 44388; Mature: 44388

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAILATGTRGDIQPFVALAQGFSAAGHEAVLAAPRAFESFVRSYGVDFFPMGSDFTAL
CEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCEEECCCCHHHH
LESPEGKAALRENPIKTMQAVRQTVIPMMRRMLDDAWAAVQGADAIIYHPKALAGVHLAE
HCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH
RLRVPCFIGAPVPVVVPTATFPAPAFVSRDLGGFLNRLTYAAVRSGTRPFRKMIDAWRRE
HCCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VLGLGPRREDEFTQGGQPVPVLHAFSRHVVPPPADWPPEAVVTGYWFARRVQVWHPPEAL
HHCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEEEEECCHHHH
SAFLEAGPPPVYVGFGSVAGLDRDEGTRMALEALSQAGVRGILATGSGDGPRLLSPDVLA
HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEE
IPEAPHDWLFPRVAAVVHHGGAGTVAPGLAAGKPTLVCPATTDQPFWGRVVHQLGVGPAP
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCC
IPRRQLTAERLAEAVRAATGDPEMQRRAAALGEAIRAEDGVAQAVAEILRRVGALAG
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKFAILATGTRGDIQPFVALAQGFSAAGHEAVLAAPRAFESFVRSYGVDFFPMGSDFTAL
CEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHCCCEEECCCCHHHH
LESPEGKAALRENPIKTMQAVRQTVIPMMRRMLDDAWAAVQGADAIIYHPKALAGVHLAE
HCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH
RLRVPCFIGAPVPVVVPTATFPAPAFVSRDLGGFLNRLTYAAVRSGTRPFRKMIDAWRRE
HCCCCEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VLGLGPRREDEFTQGGQPVPVLHAFSRHVVPPPADWPPEAVVTGYWFARRVQVWHPPEAL
HHCCCCCCCCHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEEEEECCHHHH
SAFLEAGPPPVYVGFGSVAGLDRDEGTRMALEALSQAGVRGILATGSGDGPRLLSPDVLA
HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEE
IPEAPHDWLFPRVAAVVHHGGAGTVAPGLAAGKPTLVCPATTDQPFWGRVVHQLGVGPAP
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCC
IPRRQLTAERLAEAVRAATGDPEMQRRAAALGEAIRAEDGVAQAVAEILRRVGALAG
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]