| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893531
Identifier: 51893531
GI number: 51893531
Start: 2578337
End: 2578879
Strand: Reverse
Name: 51893531
Synonym: STH2393
Alternate gene names: NA
Gene position: 2578879-2578337 (Counterclockwise)
Preceding gene: 51893533
Following gene: 51893530
Centisome position: 72.32
GC content: 69.06
Gene sequence:
>543_bases GTGCGGAGCCAGCTCGCAGCCGCCGGCCTCCGGGAACGGCTGGAGGCTGAGATCTACGACTTCGAACTGGAACTGCGGGG CACGGACAAGTCCAACCTGCTGATCCGCCTGGACAGCTTCCGCCTGGAGATCCTGGGGGCCAGGCCGGACCTCCTCCTGC ACAACCTGGCGGCGATCATCCTCACCGAAGCCGGCGCCTTCCGGCTGAACACGGTGGAGGTGGGCTTCACCGCCTGGCTG AAGGCGGGCCAGGGACGGCCCCTGAACCTGGTCGCCCAGGCCTTCACCCCCGCCTGGGGGGCGGCCGAGGCCGAGTTCCT CGACCGGCGCTTCGCCATGACCTGGGACTGGGCGACGCCCACCACCGGCTACACGTTCCACGCCAGCTCCGCGGAGGACG AGGAGCTGATGCTGAACTTCAAGGCCCGCGAGGGCTACATGACGCTGACGGAGCTGCAGACCGGCCTCTGGATCCAGGAG CAGCGCCAGCGGTTCGAGCAGGCGGCCCGCCTCTTCCTGAACCTGCTCGGCTGGACCCTATAG
Upstream 100 bases:
>100_bases GAGGCGATAGCGGTTGCTGCCTGATCAGGAGCAGAGTCTGTACGTCGAGTTCGATGAACTGTTCTCGCTGCGGGAACGGC TGCGGCCCCTGGCCGACCAG
Downstream 100 bases:
>100_bases GCGGAGGTGACGGCCTTGCGGCGGCGCGCGAAGATCCTGCGCTTCGTGCTGACGGCGGTCCTGCTGTTCATGGTCGGCCG CCTCGGCTGGTTCCACGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MRSQLAAAGLRERLEAEIYDFELELRGTDKSNLLIRLDSFRLEILGARPDLLLHNLAAIILTEAGAFRLNTVEVGFTAWL KAGQGRPLNLVAQAFTPAWGAAEAEFLDRRFAMTWDWATPTTGYTFHASSAEDEELMLNFKAREGYMTLTELQTGLWIQE QRQRFEQAARLFLNLLGWTL
Sequences:
>Translated_180_residues MRSQLAAAGLRERLEAEIYDFELELRGTDKSNLLIRLDSFRLEILGARPDLLLHNLAAIILTEAGAFRLNTVEVGFTAWL KAGQGRPLNLVAQAFTPAWGAAEAEFLDRRFAMTWDWATPTTGYTFHASSAEDEELMLNFKAREGYMTLTELQTGLWIQE QRQRFEQAARLFLNLLGWTL >Mature_180_residues MRSQLAAAGLRERLEAEIYDFELELRGTDKSNLLIRLDSFRLEILGARPDLLLHNLAAIILTEAGAFRLNTVEVGFTAWL KAGQGRPLNLVAQAFTPAWGAAEAEFLDRRFAMTWDWATPTTGYTFHASSAEDEELMLNFKAREGYMTLTELQTGLWIQE QRQRFEQAARLFLNLLGWTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20482; Mature: 20482
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSQLAAAGLRERLEAEIYDFELELRGTDKSNLLIRLDSFRLEILGARPDLLLHNLAAII CCCHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEECEEEEEECCCCHHHHHHHHHHH LTEAGAFRLNTVEVGFTAWLKAGQGRPLNLVAQAFTPAWGAAEAEFLDRRFAMTWDWATP HCCCCCEEEEEEEECHHEEHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCC TTGYTFHASSAEDEELMLNFKAREGYMTLTELQTGLWIQEQRQRFEQAARLFLNLLGWTL CCCEEEECCCCCCCEEEEEEECCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSQLAAAGLRERLEAEIYDFELELRGTDKSNLLIRLDSFRLEILGARPDLLLHNLAAII CCCHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEEECEEEEEECCCCHHHHHHHHHHH LTEAGAFRLNTVEVGFTAWLKAGQGRPLNLVAQAFTPAWGAAEAEFLDRRFAMTWDWATP HCCCCCEEEEEEEECHHEEHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCCC TTGYTFHASSAEDEELMLNFKAREGYMTLTELQTGLWIQEQRQRFEQAARLFLNLLGWTL CCCEEEECCCCCCCEEEEEEECCCCEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA