Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893423

Identifier: 51893423

GI number: 51893423

Start: 2459605

End: 2460780

Strand: Reverse

Name: 51893423

Synonym: STH2285

Alternate gene names: NA

Gene position: 2460780-2459605 (Counterclockwise)

Preceding gene: 51893428

Following gene: 51893422

Centisome position: 69.0

GC content: 61.31

Gene sequence:

>1176_bases
ATGCGAAGGGGACATGTGCGTCGTTCTTTGGCGGTGTTGGTGCTGGCGGCGCTACTATCGGCGCCCGTGGGGGCGGGCGC
CGAGGAGGAACTGACGCCGGAGGTGGCGGAGTACCCGGCGGAGAACTACGAGCCCGGCCCGGGCTGGCCGGAGGGGTGGA
CGCCCCCGCCGCCTCCGGAGGGGATGTCGGAGCGGATGCGGGCAGAGGTGGAGCAAATCCTCCGGGAGCATCCAGATCTG
TATGACCGTTACGACTGGTGGGTGTGGGATCCGCTGCCATCCTGGACGAACGAGTACCCCTGGTTCTGGCGGGAAGACAA
GATGGGGTGCGGCACCACGCTGCACGTGTACGCCTACCCGGTCCCGGATACGCAGCTGATTACACGGGAGTTTGGTCGAT
CCTTCGGCTGGTCACGGCTGTACTGGAAACCGTGTCGGTATGAGCCCATCCAATCGATTACCGAGACGCGGGAACTCAGT
GAAGAAGAGAAGCTGGCTGAGGGACGTCGTGCAGAGTACCTGTATTGGGTGGACAAGTCGCACCCCGGGCTCGGGCGGGA
TGACGGCAGCGAAAGCAACGGAAACCCCGATTATATCTACATCTATCTCAACCAAGGCGATGCCGCGAAACGCTTTGACG
TGCCGGCTTACCTGGATACGACGGTCAACCGAGTGCGTGTGCCCATCAGGTTTGTTAGTGAGATGATGGGGGCCGAAGTG
TCGTGGGATCCGGATGGCCGACGCGTGACGATTAATTTCCCTGCCATCACTCGGGAGGTCCCGAAGGTAGTCCCCGCACC
GGGTTTCGATTATCCCGACCTGTTCGACCCCGAGGAGTACCTTCCCAACGGCCACCGCTTTGCGTTTGAGGAACGGACCG
TCAGTACCCCTGAACGCACGATCATATTGACGATCGACCACCCGGTTGCGCTGGTTGACGGCCGGGAGGTACCATTGGAT
GCGCCGCCCGTGATCCGGAACGACCGAACCATGGTACCCGTTCGGTTTATTGCCGAGCAGATGGGCGCGAAGGTCTACTG
GGTGGGCGCTGAACCCATTTTCCGCTTGGACGATGGCACCATGTCGGGCACTTATCAGGTTCACATCTTCACGCCGTTCT
TCCCCCTGTATGAATACCCGAGCTGGTACCTGGAGAACAGGGCTGTCCGGTACTGA

Upstream 100 bases:

>100_bases
GCAGGTGAGATCGCGTGACGCTCATCCCGGGCAGAACCTGCTCCCGGGGCTTTTCGTATTGGGTATGTGAGAAGCACTGT
GTGGGGGAGCGTTTGCGGCA

Downstream 100 bases:

>100_bases
AAGGGGGGGCGGTTCATGAGATGGCCATGGTGGATAGCGGGTGTTATAAGCTGTGCGCTCGCCCTTTCGCCTGCCTCTGA
TGCGCTCGCCGGCAACTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MRRGHVRRSLAVLVLAALLSAPVGAGAEEELTPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSERMRAEVEQILREHPDL
YDRYDWWVWDPLPSWTNEYPWFWREDKMGCGTTLHVYAYPVPDTQLITREFGRSFGWSRLYWKPCRYEPIQSITETRELS
EEEKLAEGRRAEYLYWVDKSHPGLGRDDGSESNGNPDYIYIYLNQGDAAKRFDVPAYLDTTVNRVRVPIRFVSEMMGAEV
SWDPDGRRVTINFPAITREVPKVVPAPGFDYPDLFDPEEYLPNGHRFAFEERTVSTPERTIILTIDHPVALVDGREVPLD
APPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIFRLDDGTMSGTYQVHIFTPFFPLYEYPSWYLENRAVRY

Sequences:

>Translated_391_residues
MRRGHVRRSLAVLVLAALLSAPVGAGAEEELTPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSERMRAEVEQILREHPDL
YDRYDWWVWDPLPSWTNEYPWFWREDKMGCGTTLHVYAYPVPDTQLITREFGRSFGWSRLYWKPCRYEPIQSITETRELS
EEEKLAEGRRAEYLYWVDKSHPGLGRDDGSESNGNPDYIYIYLNQGDAAKRFDVPAYLDTTVNRVRVPIRFVSEMMGAEV
SWDPDGRRVTINFPAITREVPKVVPAPGFDYPDLFDPEEYLPNGHRFAFEERTVSTPERTIILTIDHPVALVDGREVPLD
APPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIFRLDDGTMSGTYQVHIFTPFFPLYEYPSWYLENRAVRY
>Mature_391_residues
MRRGHVRRSLAVLVLAALLSAPVGAGAEEELTPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSERMRAEVEQILREHPDL
YDRYDWWVWDPLPSWTNEYPWFWREDKMGCGTTLHVYAYPVPDTQLITREFGRSFGWSRLYWKPCRYEPIQSITETRELS
EEEKLAEGRRAEYLYWVDKSHPGLGRDDGSESNGNPDYIYIYLNQGDAAKRFDVPAYLDTTVNRVRVPIRFVSEMMGAEV
SWDPDGRRVTINFPAITREVPKVVPAPGFDYPDLFDPEEYLPNGHRFAFEERTVSTPERTIILTIDHPVALVDGREVPLD
APPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIFRLDDGTMSGTYQVHIFTPFFPLYEYPSWYLENRAVRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45303; Mature: 45303

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGHVRRSLAVLVLAALLSAPVGAGAEEELTPEVAEYPAENYEPGPGWPEGWTPPPPPE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
GMSERMRAEVEQILREHPDLYDRYDWWVWDPLPSWTNEYPWFWREDKMGCGTTLHVYAYP
CHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEEC
VPDTQLITREFGRSFGWSRLYWKPCRYEPIQSITETRELSEEEKLAEGRRAEYLYWVDKS
CCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
HPGLGRDDGSESNGNPDYIYIYLNQGDAAKRFDVPAYLDTTVNRVRVPIRFVSEMMGAEV
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCHHHEEHHHHHHHHHHCCCE
SWDPDGRRVTINFPAITREVPKVVPAPGFDYPDLFDPEEYLPNGHRFAFEERTVSTPERT
EECCCCCEEEEECCHHHHHCCHHCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCE
IILTIDHPVALVDGREVPLDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIFRLDDGT
EEEEECCCEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCEEEEECCCCEEEECCCC
MSGTYQVHIFTPFFPLYEYPSWYLENRAVRY
CCCEEEEEEECCCHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure
MRRGHVRRSLAVLVLAALLSAPVGAGAEEELTPEVAEYPAENYEPGPGWPEGWTPPPPPE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
GMSERMRAEVEQILREHPDLYDRYDWWVWDPLPSWTNEYPWFWREDKMGCGTTLHVYAYP
CHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEEC
VPDTQLITREFGRSFGWSRLYWKPCRYEPIQSITETRELSEEEKLAEGRRAEYLYWVDKS
CCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
HPGLGRDDGSESNGNPDYIYIYLNQGDAAKRFDVPAYLDTTVNRVRVPIRFVSEMMGAEV
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCHHHEEHHHHHHHHHHCCCE
SWDPDGRRVTINFPAITREVPKVVPAPGFDYPDLFDPEEYLPNGHRFAFEERTVSTPERT
EECCCCCEEEEECCHHHHHCCHHCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCE
IILTIDHPVALVDGREVPLDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIFRLDDGT
EEEEECCCEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCEEEEECCCCEEEECCCC
MSGTYQVHIFTPFFPLYEYPSWYLENRAVRY
CCCEEEEEEECCCHHHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA