| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893423
Identifier: 51893423
GI number: 51893423
Start: 2459605
End: 2460780
Strand: Reverse
Name: 51893423
Synonym: STH2285
Alternate gene names: NA
Gene position: 2460780-2459605 (Counterclockwise)
Preceding gene: 51893428
Following gene: 51893422
Centisome position: 69.0
GC content: 61.31
Gene sequence:
>1176_bases ATGCGAAGGGGACATGTGCGTCGTTCTTTGGCGGTGTTGGTGCTGGCGGCGCTACTATCGGCGCCCGTGGGGGCGGGCGC CGAGGAGGAACTGACGCCGGAGGTGGCGGAGTACCCGGCGGAGAACTACGAGCCCGGCCCGGGCTGGCCGGAGGGGTGGA CGCCCCCGCCGCCTCCGGAGGGGATGTCGGAGCGGATGCGGGCAGAGGTGGAGCAAATCCTCCGGGAGCATCCAGATCTG TATGACCGTTACGACTGGTGGGTGTGGGATCCGCTGCCATCCTGGACGAACGAGTACCCCTGGTTCTGGCGGGAAGACAA GATGGGGTGCGGCACCACGCTGCACGTGTACGCCTACCCGGTCCCGGATACGCAGCTGATTACACGGGAGTTTGGTCGAT CCTTCGGCTGGTCACGGCTGTACTGGAAACCGTGTCGGTATGAGCCCATCCAATCGATTACCGAGACGCGGGAACTCAGT GAAGAAGAGAAGCTGGCTGAGGGACGTCGTGCAGAGTACCTGTATTGGGTGGACAAGTCGCACCCCGGGCTCGGGCGGGA TGACGGCAGCGAAAGCAACGGAAACCCCGATTATATCTACATCTATCTCAACCAAGGCGATGCCGCGAAACGCTTTGACG TGCCGGCTTACCTGGATACGACGGTCAACCGAGTGCGTGTGCCCATCAGGTTTGTTAGTGAGATGATGGGGGCCGAAGTG TCGTGGGATCCGGATGGCCGACGCGTGACGATTAATTTCCCTGCCATCACTCGGGAGGTCCCGAAGGTAGTCCCCGCACC GGGTTTCGATTATCCCGACCTGTTCGACCCCGAGGAGTACCTTCCCAACGGCCACCGCTTTGCGTTTGAGGAACGGACCG TCAGTACCCCTGAACGCACGATCATATTGACGATCGACCACCCGGTTGCGCTGGTTGACGGCCGGGAGGTACCATTGGAT GCGCCGCCCGTGATCCGGAACGACCGAACCATGGTACCCGTTCGGTTTATTGCCGAGCAGATGGGCGCGAAGGTCTACTG GGTGGGCGCTGAACCCATTTTCCGCTTGGACGATGGCACCATGTCGGGCACTTATCAGGTTCACATCTTCACGCCGTTCT TCCCCCTGTATGAATACCCGAGCTGGTACCTGGAGAACAGGGCTGTCCGGTACTGA
Upstream 100 bases:
>100_bases GCAGGTGAGATCGCGTGACGCTCATCCCGGGCAGAACCTGCTCCCGGGGCTTTTCGTATTGGGTATGTGAGAAGCACTGT GTGGGGGAGCGTTTGCGGCA
Downstream 100 bases:
>100_bases AAGGGGGGGCGGTTCATGAGATGGCCATGGTGGATAGCGGGTGTTATAAGCTGTGCGCTCGCCCTTTCGCCTGCCTCTGA TGCGCTCGCCGGCAACTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MRRGHVRRSLAVLVLAALLSAPVGAGAEEELTPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSERMRAEVEQILREHPDL YDRYDWWVWDPLPSWTNEYPWFWREDKMGCGTTLHVYAYPVPDTQLITREFGRSFGWSRLYWKPCRYEPIQSITETRELS EEEKLAEGRRAEYLYWVDKSHPGLGRDDGSESNGNPDYIYIYLNQGDAAKRFDVPAYLDTTVNRVRVPIRFVSEMMGAEV SWDPDGRRVTINFPAITREVPKVVPAPGFDYPDLFDPEEYLPNGHRFAFEERTVSTPERTIILTIDHPVALVDGREVPLD APPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIFRLDDGTMSGTYQVHIFTPFFPLYEYPSWYLENRAVRY
Sequences:
>Translated_391_residues MRRGHVRRSLAVLVLAALLSAPVGAGAEEELTPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSERMRAEVEQILREHPDL YDRYDWWVWDPLPSWTNEYPWFWREDKMGCGTTLHVYAYPVPDTQLITREFGRSFGWSRLYWKPCRYEPIQSITETRELS EEEKLAEGRRAEYLYWVDKSHPGLGRDDGSESNGNPDYIYIYLNQGDAAKRFDVPAYLDTTVNRVRVPIRFVSEMMGAEV SWDPDGRRVTINFPAITREVPKVVPAPGFDYPDLFDPEEYLPNGHRFAFEERTVSTPERTIILTIDHPVALVDGREVPLD APPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIFRLDDGTMSGTYQVHIFTPFFPLYEYPSWYLENRAVRY >Mature_391_residues MRRGHVRRSLAVLVLAALLSAPVGAGAEEELTPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSERMRAEVEQILREHPDL YDRYDWWVWDPLPSWTNEYPWFWREDKMGCGTTLHVYAYPVPDTQLITREFGRSFGWSRLYWKPCRYEPIQSITETRELS EEEKLAEGRRAEYLYWVDKSHPGLGRDDGSESNGNPDYIYIYLNQGDAAKRFDVPAYLDTTVNRVRVPIRFVSEMMGAEV SWDPDGRRVTINFPAITREVPKVVPAPGFDYPDLFDPEEYLPNGHRFAFEERTVSTPERTIILTIDHPVALVDGREVPLD APPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIFRLDDGTMSGTYQVHIFTPFFPLYEYPSWYLENRAVRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45303; Mature: 45303
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGHVRRSLAVLVLAALLSAPVGAGAEEELTPEVAEYPAENYEPGPGWPEGWTPPPPPE CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC GMSERMRAEVEQILREHPDLYDRYDWWVWDPLPSWTNEYPWFWREDKMGCGTTLHVYAYP CHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEEC VPDTQLITREFGRSFGWSRLYWKPCRYEPIQSITETRELSEEEKLAEGRRAEYLYWVDKS CCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC HPGLGRDDGSESNGNPDYIYIYLNQGDAAKRFDVPAYLDTTVNRVRVPIRFVSEMMGAEV CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCHHHEEHHHHHHHHHHCCCE SWDPDGRRVTINFPAITREVPKVVPAPGFDYPDLFDPEEYLPNGHRFAFEERTVSTPERT EECCCCCEEEEECCHHHHHCCHHCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCE IILTIDHPVALVDGREVPLDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIFRLDDGT EEEEECCCEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCEEEEECCCCEEEECCCC MSGTYQVHIFTPFFPLYEYPSWYLENRAVRY CCCEEEEEEECCCHHHHCCCCHHHCCCCCCC >Mature Secondary Structure MRRGHVRRSLAVLVLAALLSAPVGAGAEEELTPEVAEYPAENYEPGPGWPEGWTPPPPPE CCCCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC GMSERMRAEVEQILREHPDLYDRYDWWVWDPLPSWTNEYPWFWREDKMGCGTTLHVYAYP CHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCCCEECCCCCCCCCEEEEEEEC VPDTQLITREFGRSFGWSRLYWKPCRYEPIQSITETRELSEEEKLAEGRRAEYLYWVDKS CCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC HPGLGRDDGSESNGNPDYIYIYLNQGDAAKRFDVPAYLDTTVNRVRVPIRFVSEMMGAEV CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHCCHHHEEHHHHHHHHHHCCCE SWDPDGRRVTINFPAITREVPKVVPAPGFDYPDLFDPEEYLPNGHRFAFEERTVSTPERT EECCCCCEEEEECCHHHHHCCHHCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCE IILTIDHPVALVDGREVPLDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIFRLDDGT EEEEECCCEEEECCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCEEEEECCCCEEEECCCC MSGTYQVHIFTPFFPLYEYPSWYLENRAVRY CCCEEEEEEECCCHHHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA