Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893405

Identifier: 51893405

GI number: 51893405

Start: 2435247

End: 2436893

Strand: Reverse

Name: 51893405

Synonym: STH2267

Alternate gene names: NA

Gene position: 2436893-2435247 (Counterclockwise)

Preceding gene: 51893407

Following gene: 51893401

Centisome position: 68.33

GC content: 61.08

Gene sequence:

>1647_bases
TTGCCCCTCTTAAACCACCATGTGGAGGTTCGACTGATGCAGTCTCATGGTACGACGCCCGAAGTCACTGCGCAAGCCAT
CAAATGCACCACCCGGCATGGTTTTCTTGTCGCTCTTGGTTGGGTAGCGCAAAGGCTGAACCTGGTTGACGTGTTGAACC
GGCACCTGCGGATCAATCAGAAGACCTACACCCATACGCCGGTCGACAAGGTAGTCGAGGCGTTGGTTGCCATTCTCGGC
AACTGCCGCTACATGAAGGACCTGAACTTCGATCCCGAGCCGCTGGTCGCCGACCCTGCCGTAGCTCAAGCCTGGGGGCA
GGAACGCTTTGCTCACTTCTCCACCGTCTGTGCGACCTTCAGCAAACTAACGGAGGAAAACGTTCAACAACTTTCCGATG
CACTGGCGGAGATCCAGGCTCCCCTGCTTCAGCAGGAGGTTGCGGCGGTGGCTGGCCCAGACCGGTCCGGAATGGTCATC
GTGGACATCGACCTCACCGGCCAGAAGGTCCGGGGAGAGACCAGGCAGTACACCGGTACCGACTTTGGCTACATCCAGGG
GCAACTGGCCCGCGGCTATCAGATCGCAGCCGCCTTCCTCACTGGAAAGCAGCAGCGCTTTGCCATCGACGGCCTTCTCA
AGTCCGGTAAGGCCAACAGCCGCTCTGGCGCCTGCCTGCTCGAACTGATCCCCAGGGTGGAAGCCCGGATCGGCCGCCCC
CTGCGGCGGGTGGAATGGGTTGAAGCATGCCTGGCTCAGCAGAAGGTGCGGGTCCGGCAGTTGCATCAGGCATTACAGAC
GGTATCGGGCAAGGGCAGCGCCCGGCGGAAACAGAAACTGCAGTCCGAGTTACAGGAGACGGTCCAGGTCATCCGTGAAC
TGAACCATCGGCTCCGGCAGTACAGGCAGGACAATCAGACGAACCCGGCTCCCCTCCGGATCGTGCTGCGAGCCGACAGC
GCCTTTGGCACGCCGGAGGTGATCCAGCGGCTGCTGGAGCTGGGATACGAGTTCACCATCAAGTCCTACTCCGGAAGCAA
TCCCGCCTACAAGCGCCTCTTCGACGCCGTGCCGGCGGAGGGCTGGGTTGAAGTCGAGAAGAACCGGTTTGCCTCCGAAG
CCGTTGCTGTGCCTGGCCCAACGCTGCTCGCACCGTATCCGGTGCGGCTTGTCGCCATGCGCCGCTGGAATACGGATGGC
CGGGAAGTCCGCAGCGTGATCCTGACCACGCTCCAAACCGAGGCGCTAACCATGACAGAGGTCGTGAAACTCTACCACGG
ACGCCAGACCATCGAAGCCGGATTCCAGGAGTGGAAGGGAACGTTTCACTTTGGTGCACCCCGGCTGCGCAAGTACGAGG
CCAACGCCGCCTTTACGCAGCTCGTCCTGTTTGCCTTCAACCTGGTGCGTTGGGCCTGGCGCTATCTGAGCACCTCCTCG
TCCAAACTGGCCGAGGCCAAGAGTCGACTCCTGGTACGGGTAGCGGCCCGGTGCCGGGCAACCATACGGTGTATTGGTGA
CACGCTGCGGCTGGTGTTCAGCCGGGGTACTCCCCTGGCTGGAGCGGAGATTACCCTGAACCGGGCCGTTTCTTACCAAT
GCACTTTTTCAACACCACGAATGTCGAGTTGTTCGCGTGAAACTTGA

Upstream 100 bases:

>100_bases
CTGCTGAGCCTAGCTCAAGTTTCGCGTGAATAACCCGCACTCCGTACAATGGAAACCCATTGAAAAAGCATCAGTCTGAA
CCAATGATACATGGTGGGAT

Downstream 100 bases:

>100_bases
GCTAGAACAGTGTAGCTTGTACAGTTCCGGATGCGACTCGTTTTCTTGGGCTGCGGTGAATCCGTGCCGTCCTGCGGCAC
TCCGTGAGTGCCTGGCGGCT

Product: transposase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MPLLNHHVEVRLMQSHGTTPEVTAQAIKCTTRHGFLVALGWVAQRLNLVDVLNRHLRINQKTYTHTPVDKVVEALVAILG
NCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRSGMVI
VDIDLTGQKVRGETRQYTGTDFGYIQGQLARGYQIAAAFLTGKQQRFAIDGLLKSGKANSRSGACLLELIPRVEARIGRP
LRRVEWVEACLAQQKVRVRQLHQALQTVSGKGSARRKQKLQSELQETVQVIRELNHRLRQYRQDNQTNPAPLRIVLRADS
AFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFASEAVAVPGPTLLAPYPVRLVAMRRWNTDG
REVRSVILTTLQTEALTMTEVVKLYHGRQTIEAGFQEWKGTFHFGAPRLRKYEANAAFTQLVLFAFNLVRWAWRYLSTSS
SKLAEAKSRLLVRVAARCRATIRCIGDTLRLVFSRGTPLAGAEITLNRAVSYQCTFSTPRMSSCSRET

Sequences:

>Translated_548_residues
MPLLNHHVEVRLMQSHGTTPEVTAQAIKCTTRHGFLVALGWVAQRLNLVDVLNRHLRINQKTYTHTPVDKVVEALVAILG
NCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRSGMVI
VDIDLTGQKVRGETRQYTGTDFGYIQGQLARGYQIAAAFLTGKQQRFAIDGLLKSGKANSRSGACLLELIPRVEARIGRP
LRRVEWVEACLAQQKVRVRQLHQALQTVSGKGSARRKQKLQSELQETVQVIRELNHRLRQYRQDNQTNPAPLRIVLRADS
AFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFASEAVAVPGPTLLAPYPVRLVAMRRWNTDG
REVRSVILTTLQTEALTMTEVVKLYHGRQTIEAGFQEWKGTFHFGAPRLRKYEANAAFTQLVLFAFNLVRWAWRYLSTSS
SKLAEAKSRLLVRVAARCRATIRCIGDTLRLVFSRGTPLAGAEITLNRAVSYQCTFSTPRMSSCSRET
>Mature_547_residues
PLLNHHVEVRLMQSHGTTPEVTAQAIKCTTRHGFLVALGWVAQRLNLVDVLNRHLRINQKTYTHTPVDKVVEALVAILGN
CRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTVCATFSKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRSGMVIV
DIDLTGQKVRGETRQYTGTDFGYIQGQLARGYQIAAAFLTGKQQRFAIDGLLKSGKANSRSGACLLELIPRVEARIGRPL
RRVEWVEACLAQQKVRVRQLHQALQTVSGKGSARRKQKLQSELQETVQVIRELNHRLRQYRQDNQTNPAPLRIVLRADSA
FGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDAVPAEGWVEVEKNRFASEAVAVPGPTLLAPYPVRLVAMRRWNTDGR
EVRSVILTTLQTEALTMTEVVKLYHGRQTIEAGFQEWKGTFHFGAPRLRKYEANAAFTQLVLFAFNLVRWAWRYLSTSSS
KLAEAKSRLLVRVAARCRATIRCIGDTLRLVFSRGTPLAGAEITLNRAVSYQCTFSTPRMSSCSRET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61454; Mature: 61323

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLNHHVEVRLMQSHGTTPEVTAQAIKCTTRHGFLVALGWVAQRLNLVDVLNRHLRINQ
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECC
KTYTHTPVDKVVEALVAILGNCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTVCATF
CCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRSGMVIVDIDLTGQKVRGETRQYTGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHCCCCCCCCCC
DFGYIQGQLARGYQIAAAFLTGKQQRFAIDGLLKSGKANSRSGACLLELIPRVEARIGRP
CCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCH
LRRVEWVEACLAQQKVRVRQLHQALQTVSGKGSARRKQKLQSELQETVQVIRELNHRLRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQDNQTNPAPLRIVLRADSAFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDAVPAE
HHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCC
GWVEVEKNRFASEAVAVPGPTLLAPYPVRLVAMRRWNTDGREVRSVILTTLQTEALTMTE
CCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VVKLYHGRQTIEAGFQEWKGTFHFGAPRLRKYEANAAFTQLVLFAFNLVRWAWRYLSTSS
HHHHHHCHHHHHHHHHHCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
SKLAEAKSRLLVRVAARCRATIRCIGDTLRLVFSRGTPLAGAEITLNRAVSYQCTFSTPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEEEEECCCC
MSSCSRET
CCCCCCCC
>Mature Secondary Structure 
PLLNHHVEVRLMQSHGTTPEVTAQAIKCTTRHGFLVALGWVAQRLNLVDVLNRHLRINQ
CCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECC
KTYTHTPVDKVVEALVAILGNCRYMKDLNFDPEPLVADPAVAQAWGQERFAHFSTVCATF
CCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SKLTEENVQQLSDALAEIQAPLLQQEVAAVAGPDRSGMVIVDIDLTGQKVRGETRQYTGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHCCCCCCCCCC
DFGYIQGQLARGYQIAAAFLTGKQQRFAIDGLLKSGKANSRSGACLLELIPRVEARIGRP
CCHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCH
LRRVEWVEACLAQQKVRVRQLHQALQTVSGKGSARRKQKLQSELQETVQVIRELNHRLRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQDNQTNPAPLRIVLRADSAFGTPEVIQRLLELGYEFTIKSYSGSNPAYKRLFDAVPAE
HHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCC
GWVEVEKNRFASEAVAVPGPTLLAPYPVRLVAMRRWNTDGREVRSVILTTLQTEALTMTE
CCEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VVKLYHGRQTIEAGFQEWKGTFHFGAPRLRKYEANAAFTQLVLFAFNLVRWAWRYLSTSS
HHHHHHCHHHHHHHHHHCCCCEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCH
SKLAEAKSRLLVRVAARCRATIRCIGDTLRLVFSRGTPLAGAEITLNRAVSYQCTFSTPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEEEEECCCC
MSSCSRET
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA