Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893367

Identifier: 51893367

GI number: 51893367

Start: 2395933

End: 2397432

Strand: Reverse

Name: 51893367

Synonym: STH2229

Alternate gene names: NA

Gene position: 2397432-2395933 (Counterclockwise)

Preceding gene: 51893368

Following gene: 51893366

Centisome position: 67.23

GC content: 65.73

Gene sequence:

>1500_bases
ATGGAGAGTCTGCAGGGACTGATGCAAGGCTTTTCGGTCGCGATGCTGCCCACCAACCTGCTGTTCGCCTTCCTGGGCTG
CCTGCTGGGCACCGCGATCGGCGTGCTCCCCGGCCTGGGGCCCGCCGGCACCATCTCGCTCCTGCTGCCCGTGGTCTACT
CGATGGGCTCCTCGGCCACGACCCTGATCTTCCTCGCCGGCATCTACTACGGCTCCATGTACGGCGGTTCGACCACCTCG
ATCCTGCTCAACCTCCCGGGTGAGGCGGCGTCTGTCATTACGGCTATCGACGGCTACGAGATGGCCAAGAAGGGGCGGGC
TGGCGCGGCGCTCAGCATCGCGGCCATCGGCTCCTTCCTCGCAGGCACCCTGGCCGTCGTGGGGCTCACGTTCGTGGCGC
CTCCGGTCGCGGAGTTCGCCCTGGACTTCGGCCCGCCCGAGTACTTCTCCCTGACCTTGCTCGGCCTCTTCCTGGCTGTC
TTCCTCTCGGGAGGCTCCATGGCCAAGGGTGTCGTCCTGCTGGCGGCGGGCGTGCTGCTCGCCAGCGTCGGCCTGGACCC
GGTGACAGGCAAGGCTCGGTTTACCTTCGGGAGCGTCGCCATGCAAAGCGGCTTCGACTTCACCACACTGGCGATGGGCG
TCTTCGGCCTGGGCGAGATTTTCTTCAATCTGGAGAAGGCGGACTTCATGGGGACGATCACCGCGAAGATCGGTCGCCTG
CTGCCGACCGCAAAGGAGTGGGCTGAGTCCCGTTGGGCGATCGTCCGCGGGGCCGTGCTCGGTTTCGCCGTTGGCGTACT
CCCCGGCGGCGGCGGCGTGCTGGGCTCGCTGGCCTCTTACGCCACCGAGCGGAAGCTCTCCAAGCACCCGGAGGAGTTCG
GCAAGGGCGCGATAGCCGGCGTGGCTGGCCCCGAGTCGGCCAACAACGCCGCTTCTACCGCTTCGTTCATCCCGCTGCTG
ACGCTGGGCATTCCCACCAACTCGTCGATGGCGGTGATCTTCGCCGCCCTGCTGATCCAGGGCGTCACTCCCGGCCCGTT
CCTCATTACGGAGCATCCGGACGTCTTTTGGGGCGTCATCGCTTCCATGTACATCGGCAACCTGATGCTGCTCGTCCTGA
ACCTGCCGCTGGTGGGAGTCTGGGTACGGCTACTGAAGGTCCCCTTCAACATCCTGGGCCCCCTGGTCGTGCTGCTCACG
GTGATCGGCGTGTACAGCACCACCAACGACGTCTTCCAGGTCTTCGTGCTGATCGGCTTCGGCGTCCTCGGTTACTTCAT
GCGTAAGTTCCGCTTCGATCCCGGCCCGCTACCCCTGGCGTTCGTGCTGGCCCCGACCATCGAGAACTCGCTGCGCCAGT
CGCTGATCATGTCCCGTGGCAGCGCCGCCATCTTCTTCACCCGGCCGATATCTGTGACGTTGCTGAGGATTTTCGCCGCC
CTGGTGATTGGCCAGTTGGCCAAGGGGCTCCGCTCCCACAGACGGACCGCACAGGCCTGA

Upstream 100 bases:

>100_bases
CCTGCTGGGCGCGGCCGGGATGTACCTCCTGTTCGTGGTGCTCCTCGGGGTGCACGTGCCCACGTCCCCCCTCGGACTGT
GAAGCTAGGGAGGGAATGGC

Downstream 100 bases:

>100_bases
TAGACAACTCGGAATTCGGATGAGGAGGAGGATCCTTGGTATGAGGCATTTCCACAAGGTGTTGGGTGTCGTTCTCGTCG
CCGGCATCGTCTTCATGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: ORFZ2 [H]

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MESLQGLMQGFSVAMLPTNLLFAFLGCLLGTAIGVLPGLGPAGTISLLLPVVYSMGSSATTLIFLAGIYYGSMYGGSTTS
ILLNLPGEAASVITAIDGYEMAKKGRAGAALSIAAIGSFLAGTLAVVGLTFVAPPVAEFALDFGPPEYFSLTLLGLFLAV
FLSGGSMAKGVVLLAAGVLLASVGLDPVTGKARFTFGSVAMQSGFDFTTLAMGVFGLGEIFFNLEKADFMGTITAKIGRL
LPTAKEWAESRWAIVRGAVLGFAVGVLPGGGGVLGSLASYATERKLSKHPEEFGKGAIAGVAGPESANNAASTASFIPLL
TLGIPTNSSMAVIFAALLIQGVTPGPFLITEHPDVFWGVIASMYIGNLMLLVLNLPLVGVWVRLLKVPFNILGPLVVLLT
VIGVYSTTNDVFQVFVLIGFGVLGYFMRKFRFDPGPLPLAFVLAPTIENSLRQSLIMSRGSAAIFFTRPISVTLLRIFAA
LVIGQLAKGLRSHRRTAQA

Sequences:

>Translated_499_residues
MESLQGLMQGFSVAMLPTNLLFAFLGCLLGTAIGVLPGLGPAGTISLLLPVVYSMGSSATTLIFLAGIYYGSMYGGSTTS
ILLNLPGEAASVITAIDGYEMAKKGRAGAALSIAAIGSFLAGTLAVVGLTFVAPPVAEFALDFGPPEYFSLTLLGLFLAV
FLSGGSMAKGVVLLAAGVLLASVGLDPVTGKARFTFGSVAMQSGFDFTTLAMGVFGLGEIFFNLEKADFMGTITAKIGRL
LPTAKEWAESRWAIVRGAVLGFAVGVLPGGGGVLGSLASYATERKLSKHPEEFGKGAIAGVAGPESANNAASTASFIPLL
TLGIPTNSSMAVIFAALLIQGVTPGPFLITEHPDVFWGVIASMYIGNLMLLVLNLPLVGVWVRLLKVPFNILGPLVVLLT
VIGVYSTTNDVFQVFVLIGFGVLGYFMRKFRFDPGPLPLAFVLAPTIENSLRQSLIMSRGSAAIFFTRPISVTLLRIFAA
LVIGQLAKGLRSHRRTAQA
>Mature_499_residues
MESLQGLMQGFSVAMLPTNLLFAFLGCLLGTAIGVLPGLGPAGTISLLLPVVYSMGSSATTLIFLAGIYYGSMYGGSTTS
ILLNLPGEAASVITAIDGYEMAKKGRAGAALSIAAIGSFLAGTLAVVGLTFVAPPVAEFALDFGPPEYFSLTLLGLFLAV
FLSGGSMAKGVVLLAAGVLLASVGLDPVTGKARFTFGSVAMQSGFDFTTLAMGVFGLGEIFFNLEKADFMGTITAKIGRL
LPTAKEWAESRWAIVRGAVLGFAVGVLPGGGGVLGSLASYATERKLSKHPEEFGKGAIAGVAGPESANNAASTASFIPLL
TLGIPTNSSMAVIFAALLIQGVTPGPFLITEHPDVFWGVIASMYIGNLMLLVLNLPLVGVWVRLLKVPFNILGPLVVLLT
VIGVYSTTNDVFQVFVLIGFGVLGYFMRKFRFDPGPLPLAFVLAPTIENSLRQSLIMSRGSAAIFFTRPISVTLLRIFAA
LVIGQLAKGLRSHRRTAQA

Specific function: Unknown

COG id: COG3333

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002823 [H]

Pfam domain/function: PF01970 DUF112 [H]

EC number: NA

Molecular weight: Translated: 51903; Mature: 51903

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLQGLMQGFSVAMLPTNLLFAFLGCLLGTAIGVLPGLGPAGTISLLLPVVYSMGSSAT
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHH
TLIFLAGIYYGSMYGGSTTSILLNLPGEAASVITAIDGYEMAKKGRAGAALSIAAIGSFL
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHH
AGTLAVVGLTFVAPPVAEFALDFGPPEYFSLTLLGLFLAVFLSGGSMAKGVVLLAAGVLL
HHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ASVGLDPVTGKARFTFGSVAMQSGFDFTTLAMGVFGLGEIFFNLEKADFMGTITAKIGRL
HHCCCCCCCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPTAKEWAESRWAIVRGAVLGFAVGVLPGGGGVLGSLASYATERKLSKHPEEFGKGAIAG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCEEE
VAGPESANNAASTASFIPLLTLGIPTNSSMAVIFAALLIQGVTPGPFLITEHPDVFWGVI
CCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
ASMYIGNLMLLVLNLPLVGVWVRLLKVPFNILGPLVVLLTVIGVYSTTNDVFQVFVLIGF
HHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GVLGYFMRKFRFDPGPLPLAFVLAPTIENSLRQSLIMSRGSAAIFFTRPISVTLLRIFAA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
LVIGQLAKGLRSHRRTAQA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MESLQGLMQGFSVAMLPTNLLFAFLGCLLGTAIGVLPGLGPAGTISLLLPVVYSMGSSAT
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHH
TLIFLAGIYYGSMYGGSTTSILLNLPGEAASVITAIDGYEMAKKGRAGAALSIAAIGSFL
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHH
AGTLAVVGLTFVAPPVAEFALDFGPPEYFSLTLLGLFLAVFLSGGSMAKGVVLLAAGVLL
HHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ASVGLDPVTGKARFTFGSVAMQSGFDFTTLAMGVFGLGEIFFNLEKADFMGTITAKIGRL
HHCCCCCCCCCCEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPTAKEWAESRWAIVRGAVLGFAVGVLPGGGGVLGSLASYATERKLSKHPEEFGKGAIAG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCEEE
VAGPESANNAASTASFIPLLTLGIPTNSSMAVIFAALLIQGVTPGPFLITEHPDVFWGVI
CCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
ASMYIGNLMLLVLNLPLVGVWVRLLKVPFNILGPLVVLLTVIGVYSTTNDVFQVFVLIGF
HHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GVLGYFMRKFRFDPGPLPLAFVLAPTIENSLRQSLIMSRGSAAIFFTRPISVTLLRIFAA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
LVIGQLAKGLRSHRRTAQA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8672817 [H]