The gene/protein map for NC_006177 is currently unavailable.
Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893366

Identifier: 51893366

GI number: 51893366

Start: 2394798

End: 2395838

Strand: Reverse

Name: 51893366

Synonym: STH2228

Alternate gene names: NA

Gene position: 2395838-2394798 (Counterclockwise)

Preceding gene: 51893367

Following gene: 51893365

Centisome position: 67.18

GC content: 66.67

Gene sequence:

>1041_bases
ATGGCTGGCTGTGGCAGTTCGGGCACGAGCACCGACGCCACGTCCCCGGCCAGCACGGAACAGAGCGCCACACACGGGAC
CCCCGCCGAGCAGACCGCCAGCCAGCAGACCTCCACTGAGCCGGCCGGCCAGGAGGAGACCAAGACCTGGAAGCCGGAGA
AGGCCGTGACCCTCATCGTGCCGTACTCGGCCGGCGGCTCCACCGACGTACTCGCCCGCGTGGTGGAGAAGATCTGGCCC
AAGTACGTCGACCAGCCCCTGACCGTGGTGAACCAGCCCGGCGGCAGCGGTTGGGTGGGCCGTGAGGCCGTGGCCAAGGC
CGCGCCCGACGGGTACACCCTGATGATCGGCTACGGCTCCGGCGAGGACCTGATCGCTCCGCAACTGCGCGAGGCCCCGT
TCGACCCGATCAACGACTTCCAGCCGATCGCCCTGCTCTCCAACCACGCCATCCTGTTCGCGACGTCCACCGAGTCTGGT
TACGAGACCATGGAGCAGCTACTGGAGGCGGCCAAGTCCGCTGAGGTCACGGCGGCCCTGTCCGGCGTCGGCAACCTGAT
GGACATTACCGTGCGCGCCGTGGCCAAGGCGGCCGGGGGCGAGATCACCGGCGTGCCGTTCGCCGGCGGCGGTCCGGCTA
CCACCGCCATGGTCGGCAACCAGGTCGATTTCGGTCCCGGCCACCAGTCTGAGTTGATGCCGCATGTGAAGGGCGGCCGG
TTACGGATCCTGGCCGTCGCCAGCCCCGAACGGGAGTCCATGCTGGCTGACGTGCCGACCCTGAAGGAGCTGGGCATCGA
CTACGTTAACGCCGGCTCGCTGAAGGGCATCGCCGCCCCAGCCGGGCTGCCCGAGGAGATCCTGGCCTACTACGAGGACC
TGTTCGCGAAGATTACCTCTGATCCGGAGTTCCAGCAAGCCATGGCCGATGTCTACCAGCCGGTGAACTACAAGAATCCC
GAGGAGTTCGGGGCCATGATCAGGGAATACTACGAGATGTACAGCCGTTTGATCAAGGAGCTGGACATCCACGTCGAGTG
A

Upstream 100 bases:

>100_bases
GCCTGATAGACAACTCGGAATTCGGATGAGGAGGAGGATCCTTGGTATGAGGCATTTCCACAAGGTGTTGGGTGTCGTTC
TCGTCGCCGGCATCGTCTTC

Downstream 100 bases:

>100_bases
GGGCTGAACCCGACTCCGTTTCGCGCGCTGGCGCTCGCGCCCGGATTCCCTGATGGGGCCCGGGCGCGTTCGCATGCGTT
GGATTCCGTCCAATCGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MAGCGSSGTSTDATSPASTEQSATHGTPAEQTASQQTSTEPAGQEETKTWKPEKAVTLIVPYSAGGSTDVLARVVEKIWP
KYVDQPLTVVNQPGGSGWVGREAVAKAAPDGYTLMIGYGSGEDLIAPQLREAPFDPINDFQPIALLSNHAILFATSTESG
YETMEQLLEAAKSAEVTAALSGVGNLMDITVRAVAKAAGGEITGVPFAGGGPATTAMVGNQVDFGPGHQSELMPHVKGGR
LRILAVASPERESMLADVPTLKELGIDYVNAGSLKGIAAPAGLPEEILAYYEDLFAKITSDPEFQQAMADVYQPVNYKNP
EEFGAMIREYYEMYSRLIKELDIHVE

Sequences:

>Translated_346_residues
MAGCGSSGTSTDATSPASTEQSATHGTPAEQTASQQTSTEPAGQEETKTWKPEKAVTLIVPYSAGGSTDVLARVVEKIWP
KYVDQPLTVVNQPGGSGWVGREAVAKAAPDGYTLMIGYGSGEDLIAPQLREAPFDPINDFQPIALLSNHAILFATSTESG
YETMEQLLEAAKSAEVTAALSGVGNLMDITVRAVAKAAGGEITGVPFAGGGPATTAMVGNQVDFGPGHQSELMPHVKGGR
LRILAVASPERESMLADVPTLKELGIDYVNAGSLKGIAAPAGLPEEILAYYEDLFAKITSDPEFQQAMADVYQPVNYKNP
EEFGAMIREYYEMYSRLIKELDIHVE
>Mature_345_residues
AGCGSSGTSTDATSPASTEQSATHGTPAEQTASQQTSTEPAGQEETKTWKPEKAVTLIVPYSAGGSTDVLARVVEKIWPK
YVDQPLTVVNQPGGSGWVGREAVAKAAPDGYTLMIGYGSGEDLIAPQLREAPFDPINDFQPIALLSNHAILFATSTESGY
ETMEQLLEAAKSAEVTAALSGVGNLMDITVRAVAKAAGGEITGVPFAGGGPATTAMVGNQVDFGPGHQSELMPHVKGGRL
RILAVASPERESMLADVPTLKELGIDYVNAGSLKGIAAPAGLPEEILAYYEDLFAKITSDPEFQQAMADVYQPVNYKNPE
EFGAMIREYYEMYSRLIKELDIHVE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 36600; Mature: 36469

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGCGSSGTSTDATSPASTEQSATHGTPAEQTASQQTSTEPAGQEETKTWKPEKAVTLIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE
PYSAGGSTDVLARVVEKIWPKYVDQPLTVVNQPGGSGWVGREAVAKAAPDGYTLMIGYGS
EECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEEEECC
GEDLIAPQLREAPFDPINDFQPIALLSNHAILFATSTESGYETMEQLLEAAKSAEVTAAL
CCCCCCCHHHHCCCCCCCCCCCHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
SGVGNLMDITVRAVAKAAGGEITGVPFAGGGPATTAMVGNQVDFGPGHQSELMPHVKGGR
HHCCHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCCCCC
LRILAVASPERESMLADVPTLKELGIDYVNAGSLKGIAAPAGLPEEILAYYEDLFAKITS
EEEEEECCCCHHHHHHCCCCHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
DPEFQQAMADVYQPVNYKNPEEFGAMIREYYEMYSRLIKELDIHVE
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AGCGSSGTSTDATSPASTEQSATHGTPAEQTASQQTSTEPAGQEETKTWKPEKAVTLIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEE
PYSAGGSTDVLARVVEKIWPKYVDQPLTVVNQPGGSGWVGREAVAKAAPDGYTLMIGYGS
EECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHCCCCCEEEEEEECC
GEDLIAPQLREAPFDPINDFQPIALLSNHAILFATSTESGYETMEQLLEAAKSAEVTAAL
CCCCCCCHHHHCCCCCCCCCCCHHEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
SGVGNLMDITVRAVAKAAGGEITGVPFAGGGPATTAMVGNQVDFGPGHQSELMPHVKGGR
HHCCHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCCCCC
LRILAVASPERESMLADVPTLKELGIDYVNAGSLKGIAAPAGLPEEILAYYEDLFAKITS
EEEEEECCCCHHHHHHCCCCHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
DPEFQQAMADVYQPVNYKNPEEFGAMIREYYEMYSRLIKELDIHVE
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271; 9524276 [H]