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The map label for this gene is ugpB [H]

Identifier: 51893317

GI number: 51893317

Start: 2331574

End: 2332830

Strand: Reverse

Name: ugpB [H]

Synonym: STH2179

Alternate gene names: 51893317

Gene position: 2332830-2331574 (Counterclockwise)

Preceding gene: 51893318

Following gene: 51893315

Centisome position: 65.42

GC content: 67.62

Gene sequence:

>1257_bases
GTGGAGATCCAGCCCGGCGAGCGGGTGAAGGTCACCTTCTGGCACGCCATGGGCGGGGTCGCCGGCGAGGCGGTGCAGCG
GCTGGTAGACCAGTTCAACAGCTCCCAGGACAAGGTGGAGGTGGAGGCGGTCTACCAGGGCACCTATGACGACGCCCTGC
AGAAGCTGAGGGCGGCAGGTTCCGACGGCCCGACGATCATGCAGGTGTACGAGATCGGCAGCCGGTTCATGATCGACTCC
GGCATGATCACGCCGATGCAGAACTTCGTCGACGCCGACGGCTTCTCCATCGACGACTTCGAGCCCAACATCCTGGGCTA
CTACACCTTCGACGGGCGGCTCTACTCGATGCCGTTCAACACCTCCACGCCCATCGTGTACTACAACAAGGACGCCTTCC
GGGAGGCGGGACTCGACCCCGAGCGGCCGCCCCGCACCTTTGAGGAGTTCAAGGAGTACGCCCGGAAGCTGACGGTCACC
CAGGGCGGCGAGACCCGCTACGGCGCCAGCATCGCACTGTACGGCTGGTTCTTCGAGCAGTTCCTGGCGGTGCAGGGCGC
CCACTACGTGGACAACGACAACGGCCGCAGCGCCCGGGCCACCAAGGCCATCATCAACTCGCCGGAGGGTGAGCGGTTCG
TCACCTGGCTGAAGGAGATGGTGGACGAGGGCGTGGCCATCAACCTGGGCCGGCGCACGGCGGATACCCAGGCGGCCTTC
TCCTCCGGGCAGGTCGCGATGACCCTGGACTCCACCGCGGCGCTGGGCAACATCCTGAACGGCGTGGGCGACAAGTTTGA
GATCGGCACCGCCTTCCTGCCGCGGCCGGAGGGGGCCGCCGAGGGCGGCGTGATCATCGGCGGCGCCTCGCTGTGGATCA
CCAACACCAAGCCGTTGAAGGAGCAGTGGGCTGCCTGGGAGTTCGTGAAGTGGCTGACGACGCCGGAGGTCCAGGCCGAG
TGGTCCATCGCCACCGGCTACTTCCCGGTCCGCAAGGCGGCGTACGACCAGCAGATCCTGAAGGACTGGCACGCCCAGCG
GCCCCAGTTCACCACCGCCATCGAGCAGCTCCGGGCGTCGCCGCTGAGCACGGTGACCCAGGGCGCCGTGATCGGCACCT
TCCCGCAGGCCCGGCAGATCGTGGAGGCCGCGATGGAGTCGGTGGTGCTGGGCCAGGCCACGGCGGCGGAGGCGCTGAAC
GCCGCAGCGGCGGAGATCACCAAGGGCATCGAGGACTACAACCGGACCACCCAGTAG

Upstream 100 bases:

>100_bases
ACGACCGGTGTTAATGGTATGGGCCCTGGTTCTGATCGCCGCCCTGCTGGCCGGCTGCGCCCGCGGGGGCGGCACCGCCT
CGGACGGGGAGTTCCAGAAG

Downstream 100 bases:

>100_bases
GTGAACGCGCATAGGGGGAGCCCGGGCGGTCGCGCCCGGGCTCCCGTCGCGACTTGATGACTATCTGTCAGCGAGATCGA
CCCGAAGGCGATGGCTCGTA

Product: glycerol-3-phosphate ABC transporter substarate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MEIQPGERVKVTFWHAMGGVAGEAVQRLVDQFNSSQDKVEVEAVYQGTYDDALQKLRAAGSDGPTIMQVYEIGSRFMIDS
GMITPMQNFVDADGFSIDDFEPNILGYYTFDGRLYSMPFNTSTPIVYYNKDAFREAGLDPERPPRTFEEFKEYARKLTVT
QGGETRYGASIALYGWFFEQFLAVQGAHYVDNDNGRSARATKAIINSPEGERFVTWLKEMVDEGVAINLGRRTADTQAAF
SSGQVAMTLDSTAALGNILNGVGDKFEIGTAFLPRPEGAAEGGVIIGGASLWITNTKPLKEQWAAWEFVKWLTTPEVQAE
WSIATGYFPVRKAAYDQQILKDWHAQRPQFTTAIEQLRASPLSTVTQGAVIGTFPQARQIVEAAMESVVLGQATAAEALN
AAAAEITKGIEDYNRTTQ

Sequences:

>Translated_418_residues
MEIQPGERVKVTFWHAMGGVAGEAVQRLVDQFNSSQDKVEVEAVYQGTYDDALQKLRAAGSDGPTIMQVYEIGSRFMIDS
GMITPMQNFVDADGFSIDDFEPNILGYYTFDGRLYSMPFNTSTPIVYYNKDAFREAGLDPERPPRTFEEFKEYARKLTVT
QGGETRYGASIALYGWFFEQFLAVQGAHYVDNDNGRSARATKAIINSPEGERFVTWLKEMVDEGVAINLGRRTADTQAAF
SSGQVAMTLDSTAALGNILNGVGDKFEIGTAFLPRPEGAAEGGVIIGGASLWITNTKPLKEQWAAWEFVKWLTTPEVQAE
WSIATGYFPVRKAAYDQQILKDWHAQRPQFTTAIEQLRASPLSTVTQGAVIGTFPQARQIVEAAMESVVLGQATAAEALN
AAAAEITKGIEDYNRTTQ
>Mature_418_residues
MEIQPGERVKVTFWHAMGGVAGEAVQRLVDQFNSSQDKVEVEAVYQGTYDDALQKLRAAGSDGPTIMQVYEIGSRFMIDS
GMITPMQNFVDADGFSIDDFEPNILGYYTFDGRLYSMPFNTSTPIVYYNKDAFREAGLDPERPPRTFEEFKEYARKLTVT
QGGETRYGASIALYGWFFEQFLAVQGAHYVDNDNGRSARATKAIINSPEGERFVTWLKEMVDEGVAINLGRRTADTQAAF
SSGQVAMTLDSTAALGNILNGVGDKFEIGTAFLPRPEGAAEGGVIIGGASLWITNTKPLKEQWAAWEFVKWLTTPEVQAE
WSIATGYFPVRKAAYDQQILKDWHAQRPQFTTAIEQLRASPLSTVTQGAVIGTFPQARQIVEAAMESVVLGQATAAEALN
AAAAEITKGIEDYNRTTQ

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=417, Percent_Identity=34.5323741007194, Blast_Score=234, Evalue=7e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46038; Mature: 46038

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIQPGERVKVTFWHAMGGVAGEAVQRLVDQFNSSQDKVEVEAVYQGTYDDALQKLRAAG
CCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCC
SDGPTIMQVYEIGSRFMIDSGMITPMQNFVDADGFSIDDFEPNILGYYTFDGRLYSMPFN
CCCCHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEECCCC
TSTPIVYYNKDAFREAGLDPERPPRTFEEFKEYARKLTVTQGGETRYGASIALYGWFFEQ
CCCCEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCEEEHHHHHHHH
FLAVQGAHYVDNDNGRSARATKAIINSPEGERFVTWLKEMVDEGVAINLGRRTADTQAAF
HHHHCCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
SSGQVAMTLDSTAALGNILNGVGDKFEIGTAFLPRPEGAAEGGVIIGGASLWITNTKPLK
CCCCEEEEECCHHHHHHHHHHCCCCEECCCEECCCCCCCCCCCEEEECCEEEEECCCCHH
EQWAAWEFVKWLTTPEVQAEWSIATGYFPVRKAAYDQQILKDWHAQRPQFTTAIEQLRAS
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PLSTVTQGAVIGTFPQARQIVEAAMESVVLGQATAAEALNAAAAEITKGIEDYNRTTQ
CHHHHHCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEIQPGERVKVTFWHAMGGVAGEAVQRLVDQFNSSQDKVEVEAVYQGTYDDALQKLRAAG
CCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCC
SDGPTIMQVYEIGSRFMIDSGMITPMQNFVDADGFSIDDFEPNILGYYTFDGRLYSMPFN
CCCCHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEECCCC
TSTPIVYYNKDAFREAGLDPERPPRTFEEFKEYARKLTVTQGGETRYGASIALYGWFFEQ
CCCCEEEECCHHHHHCCCCCCCCCHHHHHHHHHHHHEEEECCCCCCCCCEEEHHHHHHHH
FLAVQGAHYVDNDNGRSARATKAIINSPEGERFVTWLKEMVDEGVAINLGRRTADTQAAF
HHHHCCCCEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
SSGQVAMTLDSTAALGNILNGVGDKFEIGTAFLPRPEGAAEGGVIIGGASLWITNTKPLK
CCCCEEEEECCHHHHHHHHHHCCCCEECCCEECCCCCCCCCCCEEEECCEEEEECCCCHH
EQWAAWEFVKWLTTPEVQAEWSIATGYFPVRKAAYDQQILKDWHAQRPQFTTAIEQLRAS
HHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PLSTVTQGAVIGTFPQARQIVEAAMESVVLGQATAAEALNAAAAEITKGIEDYNRTTQ
CHHHHHCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]