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The map label for this gene is sdpR [H]

Identifier: 51893287

GI number: 51893287

Start: 2293719

End: 2294108

Strand: Reverse

Name: sdpR [H]

Synonym: STH2149

Alternate gene names: 51893287

Gene position: 2294108-2293719 (Counterclockwise)

Preceding gene: 51893289

Following gene: 51893286

Centisome position: 64.33

GC content: 70.51

Gene sequence:

>390_bases
ATGGGGGTGAGGCGGATGGAGCGGGTGCTGCAGGCCCTGGCCGACCCGACCCGCCGCCGCATCCTGGACCTGCTGGCGCA
AAGCGACCTGGCGGCGGGAGAAATTGCCAGGCATTTTCCCGACATCTCCCGCCCGGCCGTGTCCCAGCACCTGGCCGTCC
TGCGGGAGGCCGGGCTCGTGCGGGAGCGGCGGGAGGGAAGGAGGCGGATCTACCGGCTCGAGCCGGAACCGCTTCGGGAG
CTGTGGGAGGGCTGGCTGTCGCACTATCAGCGGTTCTGGGACGACCGCCTGGCCGGCCTGAAGCGGCTGGTGGAGTCCGA
AGACTGGCGAGGAGAGGGGGAGCAGACAGATGGAGGTTCGGGCATCCCGACAGATCGCCGCGGCTCCTGA

Upstream 100 bases:

>100_bases
CCGGTCTCACGCCTGCCCTTGCCCAACGTGTTGACGCGAATGCATGTTGACAGAGGATTCGGTGTCTTATACACTCTGAT
ACGTAAGTATCGACTTACAT

Downstream 100 bases:

>100_bases
GCGCGTGCGGCGGGCGCTGACGGACCCGGCGGAGCTCGCCGTCTGGAGCGGCGCCGCGGCCGAGGTCAGCGACTCGGTCT
ATCGCCTTCGCGGGGAAAGT

Product: transcription regulator ArsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MGVRRMERVLQALADPTRRRILDLLAQSDLAAGEIARHFPDISRPAVSQHLAVLREAGLVRERREGRRRIYRLEPEPLRE
LWEGWLSHYQRFWDDRLAGLKRLVESEDWRGEGEQTDGGSGIPTDRRGS

Sequences:

>Translated_129_residues
MGVRRMERVLQALADPTRRRILDLLAQSDLAAGEIARHFPDISRPAVSQHLAVLREAGLVRERREGRRRIYRLEPEPLRE
LWEGWLSHYQRFWDDRLAGLKRLVESEDWRGEGEQTDGGSGIPTDRRGS
>Mature_128_residues
GVRRMERVLQALADPTRRRILDLLAQSDLAAGEIARHFPDISRPAVSQHLAVLREAGLVRERREGRRRIYRLEPEPLREL
WEGWLSHYQRFWDDRLAGLKRLVESEDWRGEGEQTDGGSGIPTDRRGS

Specific function: Represses the transcription of the sdpIR operon and of several other operons that probably contribute to delaying commitment to sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 14995; Mature: 14864

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVRRMERVLQALADPTRRRILDLLAQSDLAAGEIARHFPDISRPAVSQHLAVLREAGLV
CCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
RERREGRRRIYRLEPEPLRELWEGWLSHYQRFWDDRLAGLKRLVESEDWRGEGEQTDGGS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GIPTDRRGS
CCCCCCCCC
>Mature Secondary Structure 
GVRRMERVLQALADPTRRRILDLLAQSDLAAGEIARHFPDISRPAVSQHLAVLREAGLV
CHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
RERREGRRRIYRLEPEPLRELWEGWLSHYQRFWDDRLAGLKRLVESEDWRGEGEQTDGGS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GIPTDRRGS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]