| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893286
Identifier: 51893286
GI number: 51893286
Start: 2292929
End: 2293618
Strand: Reverse
Name: 51893286
Synonym: STH2148
Alternate gene names: NA
Gene position: 2293618-2292929 (Counterclockwise)
Preceding gene: 51893287
Following gene: 51893285
Centisome position: 64.32
GC content: 74.64
Gene sequence:
>690_bases GTGCCTACGGGATCCCTCGGCGGCCGGCTGCTGGAGAACGGCGATCGGGGCTTCCGGTTCGAGTGGCCGCTCGGGGGGTG GGTATCGGTGGTCGAGATCGTGCTGGATCCGGTGACCGGAGAGGGCGGCTCATCGGACCAGCTGACCCGGGAGGGACGCA CAGTCGGGTCGGGAACGGGGGTGGGCCACGCCGGGGCCGGGTGCACCCGGGTCACCGTCCATCACCGGGGCATCCCGGAG GACGCGCTGCCGGCCCGCTGGCCGGAGCAGACCTGGCAGTGCGTCTGGGTCCTCTGGCTCCGGCTGCTGCAGGGCTGGGT GGAGCGGGCCGCGGCGCTGCCGCGTTTCGCCTTCCGGCCGCCCTTCGGAGCCGTGGTGGAGCGGTCCGTGGAGATCGACG CGCCCCCGGAGCGGGTGTGGGCCGCCCTGGTGGACCCGGTGTTGAGGGACCGGTGGCTCGGGGTTGCCCTGGGTCCGGAG CTGCGGCGGGAGGAGGGGCGGCTGCTGGTCTGCGTGTTCGCGGCGGACCAGCCGGCCACGACGGTCACGTGGCGGATCGA TCCGCTGCCCGACGGGCGCACGCGGGTGACCGTGCGGGAGGAGGGGCTGGGCTGGGAGTCCATCGACAACCACCTGGGCT GGCACGACTGGCTGGTGGCCCTGGCCCTGGAGATGGGGCGGCCGGCGTAG
Upstream 100 bases:
>100_bases GCGCGTGCGGCGGGCGCTGACGGACCCGGCGGAGCTCGCCGTCTGGAGCGGCGCCGCGGCCGAGGTCAGCGACTCGGTCT ATCGCCTTCGCGGGGAAAGT
Downstream 100 bases:
>100_bases CCGCTTGCCGTGCATGCACGCTGCAGGAGGGGGATGGAACGATGGAGATGGAACCGGTTCAGATGCGCCTGAAGGCGCCC CGGGAGCGGGTGTTCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MPTGSLGGRLLENGDRGFRFEWPLGGWVSVVEIVLDPVTGEGGSSDQLTREGRTVGSGTGVGHAGAGCTRVTVHHRGIPE DALPARWPEQTWQCVWVLWLRLLQGWVERAAALPRFAFRPPFGAVVERSVEIDAPPERVWAALVDPVLRDRWLGVALGPE LRREEGRLLVCVFAADQPATTVTWRIDPLPDGRTRVTVREEGLGWESIDNHLGWHDWLVALALEMGRPA
Sequences:
>Translated_229_residues MPTGSLGGRLLENGDRGFRFEWPLGGWVSVVEIVLDPVTGEGGSSDQLTREGRTVGSGTGVGHAGAGCTRVTVHHRGIPE DALPARWPEQTWQCVWVLWLRLLQGWVERAAALPRFAFRPPFGAVVERSVEIDAPPERVWAALVDPVLRDRWLGVALGPE LRREEGRLLVCVFAADQPATTVTWRIDPLPDGRTRVTVREEGLGWESIDNHLGWHDWLVALALEMGRPA >Mature_228_residues PTGSLGGRLLENGDRGFRFEWPLGGWVSVVEIVLDPVTGEGGSSDQLTREGRTVGSGTGVGHAGAGCTRVTVHHRGIPED ALPARWPEQTWQCVWVLWLRLLQGWVERAAALPRFAFRPPFGAVVERSVEIDAPPERVWAALVDPVLRDRWLGVALGPEL RREEGRLLVCVFAADQPATTVTWRIDPLPDGRTRVTVREEGLGWESIDNHLGWHDWLVALALEMGRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25298; Mature: 25167
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTGSLGGRLLENGDRGFRFEWPLGGWVSVVEIVLDPVTGEGGSSDQLTREGRTVGSGTG CCCCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCC VGHAGAGCTRVTVHHRGIPEDALPARWPEQTWQCVWVLWLRLLQGWVERAAALPRFAFRP CCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PFGAVVERSVEIDAPPERVWAALVDPVLRDRWLGVALGPELRREEGRLLVCVFAADQPAT CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCHHHHCCCCEEEEEEECCCCCE TVTWRIDPLPDGRTRVTVREEGLGWESIDNHLGWHDWLVALALEMGRPA EEEEEECCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure PTGSLGGRLLENGDRGFRFEWPLGGWVSVVEIVLDPVTGEGGSSDQLTREGRTVGSGTG CCCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCC VGHAGAGCTRVTVHHRGIPEDALPARWPEQTWQCVWVLWLRLLQGWVERAAALPRFAFRP CCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PFGAVVERSVEIDAPPERVWAALVDPVLRDRWLGVALGPELRREEGRLLVCVFAADQPAT CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCHHHHCCCCEEEEEEECCCCCE TVTWRIDPLPDGRTRVTVREEGLGWESIDNHLGWHDWLVALALEMGRPA EEEEEECCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA