| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51893252
Identifier: 51893252
GI number: 51893252
Start: 2256420
End: 2257013
Strand: Reverse
Name: 51893252
Synonym: STH2114
Alternate gene names: NA
Gene position: 2257013-2256420 (Counterclockwise)
Preceding gene: 51893253
Following gene: 51893250
Centisome position: 63.29
GC content: 71.89
Gene sequence:
>594_bases GTGGCCGCGCTGACGACGGTGGTCCTGGCGGGGTGTGCGGCGACCGGCGCCGTCGCGGAGCGGCAGGCGGAGCAGAAGCA GGACGTGGCTGCGGAGCGGGTGGCGACCGACGGCGGCGGAGCGGCGCCCTTCCGGGATGGGCAGTCCGTCCTTGCGGAGG ACCGGGAGGAAGGGCGGCCGTCAGAGGAGGAGTCGGGGCTCGACGGCGAGTCGGCCGTCCGGGCCGTGGTCGAGGAGTTC GGCCGCAGGCTGAAGTCCGTCTCCCTGTCGGCCCCGGACGAGGTGGTGGCCAGGAGCCTGCCGGAGCAGTACGGCGACCT GGTCTCGCCCGAGCTGTTGGAGCGCTGGCAGCACAACCCGTCCGGCGCGCCGGGGCGGGTGGTCTCCAGCCCCTGGCCGG ATCACATCGAGATCCAGAGCGTCACCCTGCGGGCCGACGGCGCCTACGAAGTCGAAGGGTGGATCGTGGAGATGACGAGT GTGGAGTTGGTGAAGGGCGGTTACGCCGCCAAGCGGCCGGTTACCCTGGTGGTGGCGCGGACCGACGAGGGATGGCGGAT CACCGACTTCGCGCTGGGTGAATACACGGCATGA
Upstream 100 bases:
>100_bases CGGGCCCTTCGGGAAACAATGGGACTGCCAGCGCCGTCCAACCAGTCGAACGTCGAAGTTGCAGGGGGGGTGCACCGTGA GACGCTGGTGTGCAGCTTGG
Downstream 100 bases:
>100_bases ATCGCCGGGGGCCGCACCCGTTGGGGTGCGGCCCCGTGCGCGAGCGACCTCAGTCGTTCCCCCGAATCAGCCGCTCCGGG ACCGTGAGCAGCCGGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MAALTTVVLAGCAATGAVAERQAEQKQDVAAERVATDGGGAAPFRDGQSVLAEDREEGRPSEEESGLDGESAVRAVVEEF GRRLKSVSLSAPDEVVARSLPEQYGDLVSPELLERWQHNPSGAPGRVVSSPWPDHIEIQSVTLRADGAYEVEGWIVEMTS VELVKGGYAAKRPVTLVVARTDEGWRITDFALGEYTA
Sequences:
>Translated_197_residues MAALTTVVLAGCAATGAVAERQAEQKQDVAAERVATDGGGAAPFRDGQSVLAEDREEGRPSEEESGLDGESAVRAVVEEF GRRLKSVSLSAPDEVVARSLPEQYGDLVSPELLERWQHNPSGAPGRVVSSPWPDHIEIQSVTLRADGAYEVEGWIVEMTS VELVKGGYAAKRPVTLVVARTDEGWRITDFALGEYTA >Mature_196_residues AALTTVVLAGCAATGAVAERQAEQKQDVAAERVATDGGGAAPFRDGQSVLAEDREEGRPSEEESGLDGESAVRAVVEEFG RRLKSVSLSAPDEVVARSLPEQYGDLVSPELLERWQHNPSGAPGRVVSSPWPDHIEIQSVTLRADGAYEVEGWIVEMTSV ELVKGGYAAKRPVTLVVARTDEGWRITDFALGEYTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21049; Mature: 20918
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALTTVVLAGCAATGAVAERQAEQKQDVAAERVATDGGGAAPFRDGQSVLAEDREEGRP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC SEEESGLDGESAVRAVVEEFGRRLKSVSLSAPDEVVARSLPEQYGDLVSPELLERWQHNP CCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC SGAPGRVVSSPWPDHIEIQSVTLRADGAYEVEGWIVEMTSVELVKGGYAAKRPVTLVVAR CCCCCCCCCCCCCCCEEEEEEEEECCCCEEECEEEEEECHHHHHHCCCCCCCCEEEEEEE TDEGWRITDFALGEYTA CCCCCEEEEEECCCCCC >Mature Secondary Structure AALTTVVLAGCAATGAVAERQAEQKQDVAAERVATDGGGAAPFRDGQSVLAEDREEGRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC SEEESGLDGESAVRAVVEEFGRRLKSVSLSAPDEVVARSLPEQYGDLVSPELLERWQHNP CCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCC SGAPGRVVSSPWPDHIEIQSVTLRADGAYEVEGWIVEMTSVELVKGGYAAKRPVTLVVAR CCCCCCCCCCCCCCCEEEEEEEEECCCCEEECEEEEEECHHHHHHCCCCCCCCEEEEEEE TDEGWRITDFALGEYTA CCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA