| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893247
Identifier: 51893247
GI number: 51893247
Start: 2250542
End: 2252782
Strand: Reverse
Name: 51893247
Synonym: STH2109
Alternate gene names: NA
Gene position: 2252782-2250542 (Counterclockwise)
Preceding gene: 51893250
Following gene: 51893246
Centisome position: 63.17
GC content: 72.6
Gene sequence:
>2241_bases TTGCTCCAGATAGCTTTCCCCGCGGCCGCGGCGGGCGTCAGCCTCACGGTCGACCCTGCGTTCCAGGGCCATTTCAAGGA GGGTGAGTGGGTCACCCTGTGGGTGGAGGTGCGGGGCGACGAGGAGGCCGCCTCCGGCGAGGTGGTGGTGCAGACCGAGG CGCCGCCCGTGTTCGGGCCTGTGTCCGGCACCCGGTATGCCGTGCCGTACAGCGTTTCCGCAGGCGAAGCGCAGCGGGTG GCGGTCAGCCTGCCGAACGAGTACAGCTGGCCCGTGAGCGTGAGCCTGTACGCGGACGGCGAGCTGGTCGATGTGCAGAC GCCCGACCTGAGCTGGGAGCCCCGGTACACCCTGATGGTCGGCGTGCTCGCCGCCGACGACGACATCCTGAACACGCTGT CCGGGCTGCGGGGCGGCGATAACGTGCGCGTCGTCTCCCTGACGGCGGAGACCCTGCCCGACAGCCCGGGCCTTCTGAAC AGCCTGGATCTGCTGGTGGTGGCCGGCTACGACACCGGCAGCCTGACGGCCCGGCAAGTACAGTCCCTGGAGGCCTGGGT GGACCGCGGGGGAACCCTGCTGCTGTTCGGCGGCCCGGAGGGCGAGCGCACTCTGGGGCCGCTGCCCGCCAGCCTGAAGC CCGTAAACGTCTCCGGGTCCGCGGAGGTCTCGCTGGCGCCGCTGGGCGACCTGTCCGGCGTGCCGCTGGAGGGCACGGCG GTCGTGAGCGCCGGCCCGCTGGCCCGGGGAACCGTCCTGGCGCGGGCCGGGGAGCCGGGCGGCGGCGGGGAACCCCCCGT GCTTGCCGCCGCGGCTCCGCTGGGCTCGGGACGGGTGGTGTACCTGGCCTACGATCCCGCGGGCGCACCCGTGGCCCGCT GGGCCGGTCAGACCGCCCTGCTGGACCGGCTGGTGGGGCTGTCGGCCGGGCGGCCGCCCGCCTTCGACACCGACTGGCGG GTGCAGTATGCGATTCAGCAGGTCCCTGACTGGGCGCTGCCCTCGGTCTGGACCGTGGTGCTGGTCCTGGGCGGCTATCT GGTGGCCGTGGGCCCGGTCAACTACCTGGTCCTGCGCCGCCTGGATCGCCGGGAATGGGGCTGGGTCACCGTTCCGCTCC TGTCGGTCATCTTCCTGGGAGCGGTCTACGGCATGGGCTCGGGCCGGTTCCAGGAGGGCATCACCCACGTGATGACCACC ACCGAGCTGGTACCCGACAGCCGGACCGGGGTGATGACCGGGTACGTGGGGCTGTACGCGCCGGGGCGCTCCCGGCTCTC CCTGCCGCTCCCCGGCGCCGGGCTCGTTCGGCCGCTGACCACCGGCACGTTCGTGGGCGGAGTGGAGAGCCGCATCGTGG CCGGCGATCCGCTCACCCTCGAGCTGTCGGGGCTGACCAACTACAACATGACCGCCTTCGCGCTGGAGCAGCCGGTGACC GTCCCGGGCGGCCTGGAGCTGGTGGACGTGGAGGTGACCGAGTTCCTGGTGACCGGCCGGATCCGGAACACCCTGCCCGT TCCGGTGTCCGGGGTGGAGGTGGGCACCGCCTACGACGTGGTGTCGGTGGGGGACCTCGCCCCCGGCCAGACGTCCGAAC CCTTCACGGCCGGGAGGAAGGCCAGGGTCGACTCCGGGCGGAAGGGGCCGATCCCGCTGCCCGGGACCGGCACTCCTGAC CCCGACGCCGACCCGCGCCGGGAGCAGCTGCGGGCCTACGTCTGGGAGTCGGGGCAGGGCCGGCTGGGCTCGGGCGTGCT GGTGATGGGCTGGACCGAGGAGCCCCTGGCACAACCGCCGGTGCCCGACCTGGGCCGCCGGGTCACCGGGGCAAACCTGG TCTATGGCTTCCAGCCGCTGCCCGCTCCGGCCGACGGCGACCTGCCCGCGGGCGTCGTCCTGGGCCGGCCGGTGGATTCC GAACGGGTGCAGCTGATCGGCCAGAACGTGTACTACGCACCCCCGGGGAGCCATCGGTTTGTCCTGTCGCTGCCCGTGCT GGATCCCGGGCAGGTGGCTGAGGTGACGGTGGATCTGCAGGCGCCGGTGCGGGAGGCCGTGATGTCGGTGTACGTCCGCA ACCAGCGCACCGGGGAGTGGGAGCTCCTTGCAGGACAGCGCGCAACGCTGGTCGACTGGCAGGACTACGTGCTTCCCGGC GGGGTGATGGAGCTCCGGTACGACCTGTCCGTCGAGGCCGAGTTCCTGGCGCCCACGGTGGCCGTGAAGGGGGTGCGCTG A
Upstream 100 bases:
>100_bases CGACCCTCAGGGCACATTCGTCTGATGAATCAGCGAGTCCCGCACCATGCAACTAGGAGGAGAAGACGTGCGAAGGCTAT GGCTGTGGGTGTTCCTGTTG
Downstream 100 bases:
>100_bases TGCTCAGGGTAGAAGGACTGGCCAAGCGCTTCGGCGATGTGGAGGCGGTGAGGGACGTCAGTTTCACCGTGGAGCCCGGG GCCATCTATGGCTTCGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 746; Mature: 746
Protein sequence:
>746_residues MLQIAFPAAAAGVSLTVDPAFQGHFKEGEWVTLWVEVRGDEEAASGEVVVQTEAPPVFGPVSGTRYAVPYSVSAGEAQRV AVSLPNEYSWPVSVSLYADGELVDVQTPDLSWEPRYTLMVGVLAADDDILNTLSGLRGGDNVRVVSLTAETLPDSPGLLN SLDLLVVAGYDTGSLTARQVQSLEAWVDRGGTLLLFGGPEGERTLGPLPASLKPVNVSGSAEVSLAPLGDLSGVPLEGTA VVSAGPLARGTVLARAGEPGGGGEPPVLAAAAPLGSGRVVYLAYDPAGAPVARWAGQTALLDRLVGLSAGRPPAFDTDWR VQYAIQQVPDWALPSVWTVVLVLGGYLVAVGPVNYLVLRRLDRREWGWVTVPLLSVIFLGAVYGMGSGRFQEGITHVMTT TELVPDSRTGVMTGYVGLYAPGRSRLSLPLPGAGLVRPLTTGTFVGGVESRIVAGDPLTLELSGLTNYNMTAFALEQPVT VPGGLELVDVEVTEFLVTGRIRNTLPVPVSGVEVGTAYDVVSVGDLAPGQTSEPFTAGRKARVDSGRKGPIPLPGTGTPD PDADPRREQLRAYVWESGQGRLGSGVLVMGWTEEPLAQPPVPDLGRRVTGANLVYGFQPLPAPADGDLPAGVVLGRPVDS ERVQLIGQNVYYAPPGSHRFVLSLPVLDPGQVAEVTVDLQAPVREAVMSVYVRNQRTGEWELLAGQRATLVDWQDYVLPG GVMELRYDLSVEAEFLAPTVAVKGVR
Sequences:
>Translated_746_residues MLQIAFPAAAAGVSLTVDPAFQGHFKEGEWVTLWVEVRGDEEAASGEVVVQTEAPPVFGPVSGTRYAVPYSVSAGEAQRV AVSLPNEYSWPVSVSLYADGELVDVQTPDLSWEPRYTLMVGVLAADDDILNTLSGLRGGDNVRVVSLTAETLPDSPGLLN SLDLLVVAGYDTGSLTARQVQSLEAWVDRGGTLLLFGGPEGERTLGPLPASLKPVNVSGSAEVSLAPLGDLSGVPLEGTA VVSAGPLARGTVLARAGEPGGGGEPPVLAAAAPLGSGRVVYLAYDPAGAPVARWAGQTALLDRLVGLSAGRPPAFDTDWR VQYAIQQVPDWALPSVWTVVLVLGGYLVAVGPVNYLVLRRLDRREWGWVTVPLLSVIFLGAVYGMGSGRFQEGITHVMTT TELVPDSRTGVMTGYVGLYAPGRSRLSLPLPGAGLVRPLTTGTFVGGVESRIVAGDPLTLELSGLTNYNMTAFALEQPVT VPGGLELVDVEVTEFLVTGRIRNTLPVPVSGVEVGTAYDVVSVGDLAPGQTSEPFTAGRKARVDSGRKGPIPLPGTGTPD PDADPRREQLRAYVWESGQGRLGSGVLVMGWTEEPLAQPPVPDLGRRVTGANLVYGFQPLPAPADGDLPAGVVLGRPVDS ERVQLIGQNVYYAPPGSHRFVLSLPVLDPGQVAEVTVDLQAPVREAVMSVYVRNQRTGEWELLAGQRATLVDWQDYVLPG GVMELRYDLSVEAEFLAPTVAVKGVR >Mature_746_residues MLQIAFPAAAAGVSLTVDPAFQGHFKEGEWVTLWVEVRGDEEAASGEVVVQTEAPPVFGPVSGTRYAVPYSVSAGEAQRV AVSLPNEYSWPVSVSLYADGELVDVQTPDLSWEPRYTLMVGVLAADDDILNTLSGLRGGDNVRVVSLTAETLPDSPGLLN SLDLLVVAGYDTGSLTARQVQSLEAWVDRGGTLLLFGGPEGERTLGPLPASLKPVNVSGSAEVSLAPLGDLSGVPLEGTA VVSAGPLARGTVLARAGEPGGGGEPPVLAAAAPLGSGRVVYLAYDPAGAPVARWAGQTALLDRLVGLSAGRPPAFDTDWR VQYAIQQVPDWALPSVWTVVLVLGGYLVAVGPVNYLVLRRLDRREWGWVTVPLLSVIFLGAVYGMGSGRFQEGITHVMTT TELVPDSRTGVMTGYVGLYAPGRSRLSLPLPGAGLVRPLTTGTFVGGVESRIVAGDPLTLELSGLTNYNMTAFALEQPVT VPGGLELVDVEVTEFLVTGRIRNTLPVPVSGVEVGTAYDVVSVGDLAPGQTSEPFTAGRKARVDSGRKGPIPLPGTGTPD PDADPRREQLRAYVWESGQGRLGSGVLVMGWTEEPLAQPPVPDLGRRVTGANLVYGFQPLPAPADGDLPAGVVLGRPVDS ERVQLIGQNVYYAPPGSHRFVLSLPVLDPGQVAEVTVDLQAPVREAVMSVYVRNQRTGEWELLAGQRATLVDWQDYVLPG GVMELRYDLSVEAEFLAPTVAVKGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78507; Mature: 78507
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQIAFPAAAAGVSLTVDPAFQGHFKEGEWVTLWVEVRGDEEAASGEVVVQTEAPPVFGP CEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCEECC VSGTRYAVPYSVSAGEAQRVAVSLPNEYSWPVSVSLYADGELVDVQTPDLSWEPRYTLMV CCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEECCCCCCCCCEEEEE GVLAADDDILNTLSGLRGGDNVRVVSLTAETLPDSPGLLNSLDLLVVAGYDTGSLTARQV EEEECCHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHH QSLEAWVDRGGTLLLFGGPEGERTLGPLPASLKPVNVSGSAEVSLAPLGDLSGVPLEGTA HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEE VVSAGPLARGTVLARAGEPGGGGEPPVLAAAAPLGSGRVVYLAYDPAGAPVARWAGQTAL EEECCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHCCHHHH LDRLVGLSAGRPPAFDTDWRVQYAIQQVPDWALPSVWTVVLVLGGYLVAVGPVNYLVLRR HHHHHHCCCCCCCCCCCCCEEEEHHHHCCCCCCHHHHHHHHHHCCEEEEECCHHHHHHHH LDRREWGWVTVPLLSVIFLGAVYGMGSGRFQEGITHVMTTTELVPDSRTGVMTGYVGLYA HCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHCHHEEEEEHEECCCCCCCEEEEEEEEEC PGRSRLSLPLPGAGLVRPLTTGTFVGGVESRIVAGDPLTLELSGLTNYNMTAFALEQPVT CCCCEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCC VPGGLELVDVEVTEFLVTGRIRNTLPVPVSGVEVGTAYDVVSVGDLAPGQTSEPFTAGRK CCCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCE ARVDSGRKGPIPLPGTGTPDPDADPRREQLRAYVWESGQGRLGSGVLVMGWTEEPLAQPP EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCCCC VPDLGRRVTGANLVYGFQPLPAPADGDLPAGVVLGRPVDSERVQLIGQNVYYAPPGSHRF CHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHEEECCEEECCCCCCEE VLSLPVLDPGQVAEVTVDLQAPVREAVMSVYVRNQRTGEWELLAGQRATLVDWQDYVLPG EEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCHHHCCCC GVMELRYDLSVEAEFLAPTVAVKGVR CEEEEEEECCEEEHHCCCEEEEECCC >Mature Secondary Structure MLQIAFPAAAAGVSLTVDPAFQGHFKEGEWVTLWVEVRGDEEAASGEVVVQTEAPPVFGP CEEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEECCCCEECC VSGTRYAVPYSVSAGEAQRVAVSLPNEYSWPVSVSLYADGELVDVQTPDLSWEPRYTLMV CCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEECCCCCCCCCEEEEE GVLAADDDILNTLSGLRGGDNVRVVSLTAETLPDSPGLLNSLDLLVVAGYDTGSLTARQV EEEECCHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHH QSLEAWVDRGGTLLLFGGPEGERTLGPLPASLKPVNVSGSAEVSLAPLGDLSGVPLEGTA HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCEE VVSAGPLARGTVLARAGEPGGGGEPPVLAAAAPLGSGRVVYLAYDPAGAPVARWAGQTAL EEECCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHCCHHHH LDRLVGLSAGRPPAFDTDWRVQYAIQQVPDWALPSVWTVVLVLGGYLVAVGPVNYLVLRR HHHHHHCCCCCCCCCCCCCEEEEHHHHCCCCCCHHHHHHHHHHCCEEEEECCHHHHHHHH LDRREWGWVTVPLLSVIFLGAVYGMGSGRFQEGITHVMTTTELVPDSRTGVMTGYVGLYA HCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHCHHEEEEEHEECCCCCCCEEEEEEEEEC PGRSRLSLPLPGAGLVRPLTTGTFVGGVESRIVAGDPLTLELSGLTNYNMTAFALEQPVT CCCCEEECCCCCCCCCCCCCCCEEECCCCCEEEECCCEEEEECCCCCCCEEEEEECCCCC VPGGLELVDVEVTEFLVTGRIRNTLPVPVSGVEVGTAYDVVSVGDLAPGQTSEPFTAGRK CCCCCEEEEEEEEEEEEECCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCE ARVDSGRKGPIPLPGTGTPDPDADPRREQLRAYVWESGQGRLGSGVLVMGWTEEPLAQPP EECCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCCCC VPDLGRRVTGANLVYGFQPLPAPADGDLPAGVVLGRPVDSERVQLIGQNVYYAPPGSHRF CHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCHHHHHEEECCEEECCCCCCEE VLSLPVLDPGQVAEVTVDLQAPVREAVMSVYVRNQRTGEWELLAGQRATLVDWQDYVLPG EEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCHHHCCCC GVMELRYDLSVEAEFLAPTVAVKGVR CEEEEEEECCEEEHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA