The gene/protein map for NC_006177 is currently unavailable.
Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is 51893245

Identifier: 51893245

GI number: 51893245

Start: 2248747

End: 2249508

Strand: Reverse

Name: 51893245

Synonym: STH2107

Alternate gene names: NA

Gene position: 2249508-2248747 (Counterclockwise)

Preceding gene: 51893246

Following gene: 51893244

Centisome position: 63.08

GC content: 71.26

Gene sequence:

>762_bases
GTGGGGCTCCTGGGGCTGCTGGCGATCCTGATCTTCGCGGCCGCGATGCAGGGCAGCCGGCCCACGGGCTTCGCGCCCGA
GGTGGGCGCCGTCATCTACGCGGCCCTCGCGATGTTCCAACTGGTGCTCCTCATCCTGGCCGTTCCCGGCCTGGCCGCCG
GGGCGATCGCCGGGGAGCGGGAGCGGCAGACCCTGGACCTGCTGCTGGTCACCCGGCTCAGCGCGGCCCAGGTGGTGGTG
GGCAAGCTGCTGGCGGCCACCGGTTTCGCCCTGCTGCTCATGTTCGCCTCGCTGCCGGTGTTCGGGCTGATCTTCCTCTT
CGGCGGGTTCTCGCTCTCCCGGCTGGGGCTCTCGGCGGTCGTCTACGTGGTGACGGTGCTGCTGCTGGGAGCCGTCTCCC
TCTACTTCAGCGCCCTCTATCGGCGCACCCAGACCGCCGTGGTCGCCGCCTACGGCGTCGTCACCACCTGGACCCTCCTG
TCCCCGCTGTTCGGCGCGCTGACGTACCACGTGTTCTTCGACGAGCATCCGCCGCTCTGGGGGCTGATCTTCGCCTACAC
CAACCCCGCCTTCGGCCTGGCCGCGGCGGCCGGGCAGCCGCTGGAGACGATGACCCGGCTGTACTCGCCCATCCTCACCA
CCGACGCGGCCCGGGAAGCGATCTGGTGGAAGTACTGCCTGATCGCCCTGGGGTTGATCGCCCTGCTGCTCTGGCGTACG
GTGCGGCGGGTCGACCCCGCTCGGGCTCCCGCCGGGCGCTGA

Upstream 100 bases:

>100_bases
AGTGAGCGGATGGACCGGCTTCGTGCGCAACCCGGTTTTCCTCCGGGAGGTGCGGGTGCGGATGCGGGGCTGGCGGACCC
CGGGGATTATCGTGCTCTAC

Downstream 100 bases:

>100_bases
GGGCAGGTACGGCGGCTTCCTGCTTGGCTGCAGGAAGCCGCCGTCTTCGCGTCCGCGGTCCCGGTCGCATACGGACTTCC
CCGGGCTCAAAGACTACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MGLLGLLAILIFAAAMQGSRPTGFAPEVGAVIYAALAMFQLVLLILAVPGLAAGAIAGERERQTLDLLLVTRLSAAQVVV
GKLLAATGFALLLMFASLPVFGLIFLFGGFSLSRLGLSAVVYVVTVLLLGAVSLYFSALYRRTQTAVVAAYGVVTTWTLL
SPLFGALTYHVFFDEHPPLWGLIFAYTNPAFGLAAAAGQPLETMTRLYSPILTTDAAREAIWWKYCLIALGLIALLLWRT
VRRVDPARAPAGR

Sequences:

>Translated_253_residues
MGLLGLLAILIFAAAMQGSRPTGFAPEVGAVIYAALAMFQLVLLILAVPGLAAGAIAGERERQTLDLLLVTRLSAAQVVV
GKLLAATGFALLLMFASLPVFGLIFLFGGFSLSRLGLSAVVYVVTVLLLGAVSLYFSALYRRTQTAVVAAYGVVTTWTLL
SPLFGALTYHVFFDEHPPLWGLIFAYTNPAFGLAAAAGQPLETMTRLYSPILTTDAAREAIWWKYCLIALGLIALLLWRT
VRRVDPARAPAGR
>Mature_252_residues
GLLGLLAILIFAAAMQGSRPTGFAPEVGAVIYAALAMFQLVLLILAVPGLAAGAIAGERERQTLDLLLVTRLSAAQVVVG
KLLAATGFALLLMFASLPVFGLIFLFGGFSLSRLGLSAVVYVVTVLLLGAVSLYFSALYRRTQTAVVAAYGVVTTWTLLS
PLFGALTYHVFFDEHPPLWGLIFAYTNPAFGLAAAAGQPLETMTRLYSPILTTDAAREAIWWKYCLIALGLIALLLWRTV
RRVDPARAPAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27002; Mature: 26870

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCCCCCC
>Mature Secondary Structure 
GLLGLLAILIFAAAMQGSRPTGFAPEVGAVIYAALAMFQLVLLILAVPGLAAGAIAGER
CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHH
ERQTLDLLLVTRLSAAQVVVGKLLAATGFALLLMFASLPVFGLIFLFGGFSLSRLGLSAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VYVVTVLLLGAVSLYFSALYRRTQTAVVAAYGVVTTWTLLSPLFGALTYHVFFDEHPPLW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
GLIFAYTNPAFGLAAAAGQPLETMTRLYSPILTTDAAREAIWWKYCLIALGLIALLLWRT
HHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRRVDPARAPAGR
HHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA