Click here to switch to the map view.

The map label for this gene is 51893214

Identifier: 51893214

GI number: 51893214

Start: 2212183

End: 2212719

Strand: Reverse

Name: 51893214

Synonym: STH2076

Alternate gene names: NA

Gene position: 2212719-2212183 (Counterclockwise)

Preceding gene: 51893215

Following gene: 51893213

Centisome position: 62.05

GC content: 69.65

Gene sequence:

>537_bases
GTGGTCCGACTCGTCATCCTCGGGTTGCTCAACCAGCGACCGATGTCCGGCTACGAGATCCAGCAGCTGCACCAGGTCAG
CCGGATCGACCAGTGGTCCGACATCCTTCCCGGGTCGATCTACCACGCCCTGAAGAAGATGGCCGCCGAGGGGCTGGTGG
CGCTGGCCGGCACCGAGCAGACCGGCATGCGCACCAAGGCCATCTTCGAGATCACGGACGCGGGCCGGGCCGAGTACCGG
CGGGTTCTGCGGGAGGCGTGGAGCCAGGTGCCCCGGTCGCTGCCGGGGGACTTCTATCTGCTTCTCTCTTTTGCCCACGA
CATGCCCCGTGCCGATCTGCAGGCCGCGCTGCGGGAGCTGATCGCCCGGCTGGAGGAGCGGCTGGCGCAGTGGGAGGAGG
GCCGGGCGGCCAAGGCGGCGGCCGTGGGCGACCTCCCGCCGCCGATCCGGGCGGCCTTCGACAACGGGCGGGAGCATATG
GAGGCGGACCTCCGGTTTCTGCGCCGCCTGTTGGAGGAGTTTGCGGAGTCCGAGTGA

Upstream 100 bases:

>100_bases
TCCCCGGGCGGTTCCGCGCGTGCGGCCGGATCCGCCCCTTGACACGGACCCGTCGCGCTCATATACTCAACGTTGAGTAA
ACAACCTTGGGGGTATGCCC

Downstream 100 bases:

>100_bases
TTGAAGGGGGAGTGGGGATGACGCTTCTCATCGATGCCCGGAACCTGGTGAAGCGGTACCGCGACCGCATCGCCGTGAGC
GACGTCAGCCTGTCGGTGGC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; PadR-Like Family Transcriptional Regulator

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MVRLVILGLLNQRPMSGYEIQQLHQVSRIDQWSDILPGSIYHALKKMAAEGLVALAGTEQTGMRTKAIFEITDAGRAEYR
RVLREAWSQVPRSLPGDFYLLLSFAHDMPRADLQAALRELIARLEERLAQWEEGRAAKAAAVGDLPPPIRAAFDNGREHM
EADLRFLRRLLEEFAESE

Sequences:

>Translated_178_residues
MVRLVILGLLNQRPMSGYEIQQLHQVSRIDQWSDILPGSIYHALKKMAAEGLVALAGTEQTGMRTKAIFEITDAGRAEYR
RVLREAWSQVPRSLPGDFYLLLSFAHDMPRADLQAALRELIARLEERLAQWEEGRAAKAAAVGDLPPPIRAAFDNGREHM
EADLRFLRRLLEEFAESE
>Mature_178_residues
MVRLVILGLLNQRPMSGYEIQQLHQVSRIDQWSDILPGSIYHALKKMAAEGLVALAGTEQTGMRTKAIFEITDAGRAEYR
RVLREAWSQVPRSLPGDFYLLLSFAHDMPRADLQAALRELIARLEERLAQWEEGRAAKAAAVGDLPPPIRAAFDNGREHM
EADLRFLRRLLEEFAESE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20180; Mature: 20180

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLVILGLLNQRPMSGYEIQQLHQVSRIDQWSDILPGSIYHALKKMAAEGLVALAGTEQ
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHCCCCC
TGMRTKAIFEITDAGRAEYRRVLREAWSQVPRSLPGDFYLLLSFAHDMPRADLQAALREL
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH
IARLEERLAQWEEGRAAKAAAVGDLPPPIRAAFDNGREHMEADLRFLRRLLEEFAESE
HHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVRLVILGLLNQRPMSGYEIQQLHQVSRIDQWSDILPGSIYHALKKMAAEGLVALAGTEQ
CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHCCCCC
TGMRTKAIFEITDAGRAEYRRVLREAWSQVPRSLPGDFYLLLSFAHDMPRADLQAALREL
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH
IARLEERLAQWEEGRAAKAAAVGDLPPPIRAAFDNGREHMEADLRFLRRLLEEFAESE
HHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA