| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893207
Identifier: 51893207
GI number: 51893207
Start: 2207227
End: 2207583
Strand: Reverse
Name: 51893207
Synonym: STH2069
Alternate gene names: NA
Gene position: 2207583-2207227 (Counterclockwise)
Preceding gene: 51893212
Following gene: 51893206
Centisome position: 61.9
GC content: 74.51
Gene sequence:
>357_bases GTGGGGCGCCGCCCGGACGCGGGTTGGTCCTGCGCGCTGCGCCGGACCGGGGAGGGCGGGGGATGGACGGGGCCCCAGGA CGACCTCGGCGAGGAGCGGTTCCTCGCCCTCCAGCTGCAGCGCAGCCCGCACGGCCTCCACAGGGGTCCCGGACGGGAAG GAGAAGGTGAGGACGACCCCCTCAGGGTCCGCGGCCAGGTCGCAGAGGCTGCGGTGGTCCCATCCTGCACCTGTCCCGTC CGGCGGGCAGAGCCGGGTTCCGTTACGGGTCCGGCGGCGAGGCCGAGCCCGGTGATCAGGGCGAGAAGCGCCGCCATGGC CACGGTGAAGTGTCGTCGCATGCTCCCACCTCCGTGA
Upstream 100 bases:
>100_bases AGCCCGGCATGAACCAGGGCGGCAGTTGCATGGGTATCCTCCTTCGGAAGTACGTTCACCGCCAGTCTATGGCGTGGCGG AAGGAGGGGTGTCGCCCTGG
Downstream 100 bases:
>100_bases GGCGCCGTGATTGAATCGGACCGACCGGCCGGCGCTGCGTCGGGGGAAGCGCTCCTTGGCATCCCGCCGGTGGCGGGCCC ATGCCCTGGACACCACGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MGRRPDAGWSCALRRTGEGGGWTGPQDDLGEERFLALQLQRSPHGLHRGPGREGEGEDDPLRVRGQVAEAAVVPSCTCPV RRAEPGSVTGPAARPSPVIRARSAAMATVKCRRMLPPP
Sequences:
>Translated_118_residues MGRRPDAGWSCALRRTGEGGGWTGPQDDLGEERFLALQLQRSPHGLHRGPGREGEGEDDPLRVRGQVAEAAVVPSCTCPV RRAEPGSVTGPAARPSPVIRARSAAMATVKCRRMLPPP >Mature_117_residues GRRPDAGWSCALRRTGEGGGWTGPQDDLGEERFLALQLQRSPHGLHRGPGREGEGEDDPLRVRGQVAEAAVVPSCTCPVR RAEPGSVTGPAARPSPVIRARSAAMATVKCRRMLPPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12558; Mature: 12427
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRPDAGWSCALRRTGEGGGWTGPQDDLGEERFLALQLQRSPHGLHRGPGREGEGEDDP CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC LRVRGQVAEAAVVPSCTCPVRRAEPGSVTGPAARPSPVIRARSAAMATVKCRRMLPPP EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GRRPDAGWSCALRRTGEGGGWTGPQDDLGEERFLALQLQRSPHGLHRGPGREGEGEDDP CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCC LRVRGQVAEAAVVPSCTCPVRRAEPGSVTGPAARPSPVIRARSAAMATVKCRRMLPPP EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA