| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893202
Identifier: 51893202
GI number: 51893202
Start: 2202663
End: 2203163
Strand: Reverse
Name: 51893202
Synonym: STH2064
Alternate gene names: NA
Gene position: 2203163-2202663 (Counterclockwise)
Preceding gene: 51893203
Following gene: 51893198
Centisome position: 61.78
GC content: 60.08
Gene sequence:
>501_bases ATGTTCAGCATCGCCCGCTTTCTCGCAGCCTGCCTCGTGATGTGCCTGGTGTTCGGTGTGCTGGTGTTCGGTATGCTCCT GATGAACCCCGTCAGCTTCATCAACTCCTACCCACCCGAGATTCAAGCCGAGTATTACCGCTCTCAGAGCAAAGAAGCGG CGAGACGGAAGCTGACGGTGATCATGGGGATCAAGAAGGCAGCGGCTCTGACGGCGTTCCTGTTTCTCTTCGCCTGGATG GCCAAGTGGGCGGGCGCCGACACCTTCGGGGAAGGTCTGATGGCCGTGTACGGCTATGGCCTTGTTCTGGCGGTGTTCGA CACCTGCTTTCTGGACTGGGTCCTCTTCCCGAACATCAGACGGATCCGCCTGCCGGGCACGGAACACATGGATCGGGAGT ACCGCCAGAAGTGGTTTCATGTGAAGGCGATGCTGCCGATGTTGCCGCTCTTCGCCGTCGGCGGTGTCGCGGCGGCGCTG ATCATGGTCTGGATCTGGTGA
Upstream 100 bases:
>100_bases GGGGCATCCTGGACAAGCTGCGGTACCGGGAGTGATCGTGACGGGCCATGGGCCCGGGGGATGGCGTCGCCGGGACAGGT CATGACCGGGGGTGCAGGGC
Downstream 100 bases:
>100_bases TGCGCCACGGGGCCGCGCCGTCGTGGAACGCGCCGCACTGGTAGTTGAGCATCGGGTCGTCGCCCATCGGCACGCCGATG AAGTAGTTGACGCCCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MFSIARFLAACLVMCLVFGVLVFGMLLMNPVSFINSYPPEIQAEYYRSQSKEAARRKLTVIMGIKKAAALTAFLFLFAWM AKWAGADTFGEGLMAVYGYGLVLAVFDTCFLDWVLFPNIRRIRLPGTEHMDREYRQKWFHVKAMLPMLPLFAVGGVAAAL IMVWIW
Sequences:
>Translated_166_residues MFSIARFLAACLVMCLVFGVLVFGMLLMNPVSFINSYPPEIQAEYYRSQSKEAARRKLTVIMGIKKAAALTAFLFLFAWM AKWAGADTFGEGLMAVYGYGLVLAVFDTCFLDWVLFPNIRRIRLPGTEHMDREYRQKWFHVKAMLPMLPLFAVGGVAAAL IMVWIW >Mature_166_residues MFSIARFLAACLVMCLVFGVLVFGMLLMNPVSFINSYPPEIQAEYYRSQSKEAARRKLTVIMGIKKAAALTAFLFLFAWM AKWAGADTFGEGLMAVYGYGLVLAVFDTCFLDWVLFPNIRRIRLPGTEHMDREYRQKWFHVKAMLPMLPLFAVGGVAAAL IMVWIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18877; Mature: 18877
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIARFLAACLVMCLVFGVLVFGMLLMNPVSFINSYPPEIQAEYYRSQSKEAARRKLTV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IMGIKKAAALTAFLFLFAWMAKWAGADTFGEGLMAVYGYGLVLAVFDTCFLDWVLFPNIR HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RIRLPGTEHMDREYRQKWFHVKAMLPMLPLFAVGGVAAALIMVWIW EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSIARFLAACLVMCLVFGVLVFGMLLMNPVSFINSYPPEIQAEYYRSQSKEAARRKLTV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IMGIKKAAALTAFLFLFAWMAKWAGADTFGEGLMAVYGYGLVLAVFDTCFLDWVLFPNIR HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RIRLPGTEHMDREYRQKWFHVKAMLPMLPLFAVGGVAAALIMVWIW EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA