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The map label for this gene is dppB [H]

Identifier: 51893094

GI number: 51893094

Start: 2096782

End: 2097273

Strand: Reverse

Name: dppB [H]

Synonym: STH1956

Alternate gene names: 51893094

Gene position: 2097273-2096782 (Counterclockwise)

Preceding gene: 51893095

Following gene: 51893093

Centisome position: 58.81

GC content: 71.54

Gene sequence:

>492_bases
TTGCCCGTGGCCTGGGATGAGGCACGGCCGGTTGCGAGCATGGTGCTCCCGGTCGCGTGTCTGGCGCTGCTCCCCCTGGT
CACGGTGGCCCGCATCACCGCGCAGGCAATGGCCGGCGTCTACGGGCAGGACTACATCCGCACCGCCCGCGCCAAGGGGC
TGCCGGAGCGGGTGGTGATTTACAAGCACGCCCTGGCCGGCGCGCTCGTCCCGATTCTGGACGCCATGCCGGGCGTGCTC
ACCGTCGTCTTCTCCAACGCCCTCGTGGTGGAGCTTCTCTTCCATTACCCGGGCGTGACCAACCTGCTCCAGGACGCCGC
CAGCCCTCCCGGCCTCGTCGCCGACCTGCGCAGGTCGCTGCCGCCGCCCGACGTGCCGGTGCTGGTCGCCGCCGGCGCGT
CGCTCGGGCTGATCTTCGCCCTGCTCTACGCCGCGGTCTCGGTTCTGCGCAGGGTGGTCGATCCGCGGCTGAGGGGGCGT
GATCTGCCGTGA

Upstream 100 bases:

>100_bases
GCTGCTCACCGGCCTGCTCCAGGGGGTTCCCGACTTCTTCCTGGTGATGCTGCTGCCGATCGGGGTGGTTTAGTTCTACC
AGCGGACCGGCTTCCGCCTG

Downstream 100 bases:

>100_bases
GCGCCGCGCAGAAGGGGTCCCGCCTCCCCCTCATTGCAGGCGGACTGCTGGTCGGCCTGCTGCTGCTGGCAGCTGTGTTC
GCCGACGAGATCACCGCCGT

Product: ABC transporter permease protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MPVAWDEARPVASMVLPVACLALLPLVTVARITAQAMAGVYGQDYIRTARAKGLPERVVIYKHALAGALVPILDAMPGVL
TVVFSNALVVELLFHYPGVTNLLQDAASPPGLVADLRRSLPPPDVPVLVAAGASLGLIFALLYAAVSVLRRVVDPRLRGR
DLP

Sequences:

>Translated_163_residues
MPVAWDEARPVASMVLPVACLALLPLVTVARITAQAMAGVYGQDYIRTARAKGLPERVVIYKHALAGALVPILDAMPGVL
TVVFSNALVVELLFHYPGVTNLLQDAASPPGLVADLRRSLPPPDVPVLVAAGASLGLIFALLYAAVSVLRRVVDPRLRGR
DLP
>Mature_162_residues
PVAWDEARPVASMVLPVACLALLPLVTVARITAQAMAGVYGQDYIRTARAKGLPERVVIYKHALAGALVPILDAMPGVLT
VVFSNALVVELLFHYPGVTNLLQDAASPPGLVADLRRSLPPPDVPVLVAAGASLGLIFALLYAAVSVLRRVVDPRLRGRD
LP

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=151, Percent_Identity=35.0993377483444, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI1787497, Length=145, Percent_Identity=34.4827586206897, Blast_Score=79, Evalue=1e-16,
Organism=Escherichia coli, GI1787053, Length=146, Percent_Identity=31.5068493150685, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 17232; Mature: 17101

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVAWDEARPVASMVLPVACLALLPLVTVARITAQAMAGVYGQDYIRTARAKGLPERVVI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
YKHALAGALVPILDAMPGVLTVVFSNALVVELLFHYPGVTNLLQDAASPPGLVADLRRSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCC
PPPDVPVLVAAGASLGLIFALLYAAVSVLRRVVDPRLRGRDLP
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC
>Mature Secondary Structure 
PVAWDEARPVASMVLPVACLALLPLVTVARITAQAMAGVYGQDYIRTARAKGLPERVVI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
YKHALAGALVPILDAMPGVLTVVFSNALVVELLFHYPGVTNLLQDAASPPGLVADLRRSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCC
PPPDVPVLVAAGASLGLIFALLYAAVSVLRRVVDPRLRGRDLP
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]