| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893082
Identifier: 51893082
GI number: 51893082
Start: 2085655
End: 2086416
Strand: Reverse
Name: 51893082
Synonym: STH1944
Alternate gene names: NA
Gene position: 2086416-2085655 (Counterclockwise)
Preceding gene: 51893083
Following gene: 51893080
Centisome position: 58.51
GC content: 69.69
Gene sequence:
>762_bases TTGCGGAGACACGGCATGATGGGCTTCGTGGCCGGCTTCGTGACCGCGGCCGTGCTGTTCGGCGGTCTGGCGGTGGCGGC GGGCTACGAGCGGCAGATTACGGTGCACTTCCGGCCGCTGAAGTACGTGTTTGACGGCATCGAGCGCACGCCGCAGGGGG GCGAGGCGGGCTTCATCTATCAGAACCGCACCTACGTGCCGCTGCGCTTCATCGCGGAGTCGCTGGGCCGCCCGGTGGAG TTCGTGGACGGCACGATCTACGTGGGCGCGATCCCGGGGAAGACCCCGGAGGTCTGGAACCGCCTGACCGAGCAGGGGGA GGGCAGCTTCAAGGTCCAGTTCTTCGCCGACCGGGCCCTCAGCCTGCAGGGGGAGGAGATGCCGGCGGCCACCGTGGTCA CCCTGGTCGCCCCGGGGGGCGACGTGGAGGACAAGCGGGGCGTGACCTCGCAGTTGTGGGCCGACTACGACCTGCCGGCG GGCGTCGGCCGCATGAGCGGCACGCTCTACGTGCCGCACCAGTATTTCGGGCTGGCCGGCGAGCGGCGCGTGGGCCGCCT GGTGGTGCTCAATGAGCTGAACCGGCCCATCTACACCAGCCCGGACCTCACGACCAAGTCCGACCCCGTGCCGTTCTCGG TGCCGCTGGACGGCGTGAAGCGGGTGCGGATCGTGGTCACGCTGCACCCCTACGAGGGGGTGCCGCTGGGCGATCAGCTG GTGATGGCCCAGATGGGCATCGCCGGCCTGAAGTTCGAGTAG
Upstream 100 bases:
>100_bases GCACGCTGCCGGAGGTGTCCCGGCCCGCGCGACGGACAGGAAACGCCCTCCTCCGGACGAATTCCACTAGGAGAACTCGT CCGTAGAGGAGGGCGCTGCT
Downstream 100 bases:
>100_bases GCGCGCACGGGGCGGGGGAGAAGCGACCCCCGCCCGTTCGTTTTTTCCTACCACTCGTCCCCGGGGGCGAAGGGCTTGTC GCCCTTGTCCTGCGTCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRRHGMMGFVAGFVTAAVLFGGLAVAAGYERQITVHFRPLKYVFDGIERTPQGGEAGFIYQNRTYVPLRFIAESLGRPVE FVDGTIYVGAIPGKTPEVWNRLTEQGEGSFKVQFFADRALSLQGEEMPAATVVTLVAPGGDVEDKRGVTSQLWADYDLPA GVGRMSGTLYVPHQYFGLAGERRVGRLVVLNELNRPIYTSPDLTTKSDPVPFSVPLDGVKRVRIVVTLHPYEGVPLGDQL VMAQMGIAGLKFE
Sequences:
>Translated_253_residues MRRHGMMGFVAGFVTAAVLFGGLAVAAGYERQITVHFRPLKYVFDGIERTPQGGEAGFIYQNRTYVPLRFIAESLGRPVE FVDGTIYVGAIPGKTPEVWNRLTEQGEGSFKVQFFADRALSLQGEEMPAATVVTLVAPGGDVEDKRGVTSQLWADYDLPA GVGRMSGTLYVPHQYFGLAGERRVGRLVVLNELNRPIYTSPDLTTKSDPVPFSVPLDGVKRVRIVVTLHPYEGVPLGDQL VMAQMGIAGLKFE >Mature_253_residues MRRHGMMGFVAGFVTAAVLFGGLAVAAGYERQITVHFRPLKYVFDGIERTPQGGEAGFIYQNRTYVPLRFIAESLGRPVE FVDGTIYVGAIPGKTPEVWNRLTEQGEGSFKVQFFADRALSLQGEEMPAATVVTLVAPGGDVEDKRGVTSQLWADYDLPA GVGRMSGTLYVPHQYFGLAGERRVGRLVVLNELNRPIYTSPDLTTKSDPVPFSVPLDGVKRVRIVVTLHPYEGVPLGDQL VMAQMGIAGLKFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27664; Mature: 27664
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRHGMMGFVAGFVTAAVLFGGLAVAAGYERQITVHFRPLKYVFDGIERTPQGGEAGFIY CCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEEHHHHHHHHHHCCCCCCCEEEEE QNRTYVPLRFIAESLGRPVEFVDGTIYVGAIPGKTPEVWNRLTEQGEGSFKVQFFADRAL CCCCEEHHHHHHHHHCCCEEEECCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCEE SLQGEEMPAATVVTLVAPGGDVEDKRGVTSQLWADYDLPAGVGRMSGTLYVPHQYFGLAG CCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECHHHHCCCC ERRVGRLVVLNELNRPIYTSPDLTTKSDPVPFSVPLDGVKRVRIVVTLHPYEGVPLGDQL CCCCCEEEEEECCCCCEECCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCCCHHH VMAQMGIAGLKFE HHHHHCCCCCCCC >Mature Secondary Structure MRRHGMMGFVAGFVTAAVLFGGLAVAAGYERQITVHFRPLKYVFDGIERTPQGGEAGFIY CCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEEHHHHHHHHHHCCCCCCCEEEEE QNRTYVPLRFIAESLGRPVEFVDGTIYVGAIPGKTPEVWNRLTEQGEGSFKVQFFADRAL CCCCEEHHHHHHHHHCCCEEEECCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCEE SLQGEEMPAATVVTLVAPGGDVEDKRGVTSQLWADYDLPAGVGRMSGTLYVPHQYFGLAG CCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEECHHHHCCCC ERRVGRLVVLNELNRPIYTSPDLTTKSDPVPFSVPLDGVKRVRIVVTLHPYEGVPLGDQL CCCCCEEEEEECCCCCEECCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCCCHHH VMAQMGIAGLKFE HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA