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The map label for this gene is sorB [H]

Identifier: 51893077

GI number: 51893077

Start: 2082030

End: 2082515

Strand: Reverse

Name: sorB [H]

Synonym: STH1939

Alternate gene names: 51893077

Gene position: 2082515-2082030 (Counterclockwise)

Preceding gene: 51893078

Following gene: 51893076

Centisome position: 58.4

GC content: 65.64

Gene sequence:

>486_bases
GTGGTCCACATGCGCATCGACAACCGCCTGATCCACGGTCAGGTCACGGTCGCGTGGGCGAGCCACCTGAGCGCCGACCA
CATGATCGTCTGCAACGACAAGGTCGCGCAGGATCCGATTCAGAAGATGATGCTGCCGGCCGCGGCGCGCGGCGTGAAGA
CGTCGGTGCTCTCGGTGGCGGATACGCTCGCCTACTGCGCCTCGCCCGAGGCGGAGCAGGAGCGCATCTTCATCATCGCC
AAGTTCCCGTCCGACGCGCTGGCGCTCCTGGACGGCGGCCTGAAGCCGCAGGAGATCAACGTCGGCAACCAGGCGCCGAT
CCCTGGCACCAAGTTCACGATGGTCACCCGCACCTGCGCGGTGACGCCGGAGGACGCGGCGATCTACCGCGAGATCGTCA
AGCGTGGTTACGAGCTGACCGGCCGCATGGTGCCCGCCGATCCGAAGAACGATTTCATTGAGCTGATCGCCAAGAAGGGG
CTGTGA

Upstream 100 bases:

>100_bases
ACCGCCGTGCAGGCGGGCGCCTCCGGTGCCCTGCGCCTGGCCGACGTGCTCGGCCGGGGTTGATCAGATCTCACGATCGG
GAGGAGAGAGACGTATGCCC

Downstream 100 bases:

>100_bases
GGGGGCCGGAACATGAAGGCCGGACACCACTGTGCGATCATCACGCCGCCCATCCCCTGCGGGATGGGGGGCTATGCGGC
TCGGTCCGGGCCGGCCGAGG

Product: PTS system IIB component

Products: NA

Alternate protein names: EIIB-Sor; EIII-B-Sor; PTS system sorbose-specific EIIB component [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MVHMRIDNRLIHGQVTVAWASHLSADHMIVCNDKVAQDPIQKMMLPAAARGVKTSVLSVADTLAYCASPEAEQERIFIIA
KFPSDALALLDGGLKPQEINVGNQAPIPGTKFTMVTRTCAVTPEDAAIYREIVKRGYELTGRMVPADPKNDFIELIAKKG
L

Sequences:

>Translated_161_residues
MVHMRIDNRLIHGQVTVAWASHLSADHMIVCNDKVAQDPIQKMMLPAAARGVKTSVLSVADTLAYCASPEAEQERIFIIA
KFPSDALALLDGGLKPQEINVGNQAPIPGTKFTMVTRTCAVTPEDAAIYREIVKRGYELTGRMVPADPKNDFIELIAKKG
L
>Mature_161_residues
MVHMRIDNRLIHGQVTVAWASHLSADHMIVCNDKVAQDPIQKMMLPAAARGVKTSVLSVADTLAYCASPEAEQERIFIIA
KFPSDALALLDGGLKPQEINVGNQAPIPGTKFTMVTRTCAVTPEDAAIYREIVKRGYELTGRMVPADPKNDFIELIAKKG
L

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG3444

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1788120, Length=155, Percent_Identity=35.4838709677419, Blast_Score=95, Evalue=2e-21,
Organism=Escherichia coli, GI87082217, Length=157, Percent_Identity=32.484076433121, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1789527, Length=147, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 17570; Mature: 17570

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS51101 PTS_EIIB_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHMRIDNRLIHGQVTVAWASHLSADHMIVCNDKVAQDPIQKMMLPAAARGVKTSVLSVA
CEEEEECCEEEECEEEEEEHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHH
DTLAYCASPEAEQERIFIIAKFPSDALALLDGGLKPQEINVGNQAPIPGTKFTMVTRTCA
HHHHHHCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCEECCCCCCCCCCCEEEEEEEEEE
VTPEDAAIYREIVKRGYELTGRMVPADPKNDFIELIAKKGL
CCCCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MVHMRIDNRLIHGQVTVAWASHLSADHMIVCNDKVAQDPIQKMMLPAAARGVKTSVLSVA
CEEEEECCEEEECEEEEEEHHHCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHH
DTLAYCASPEAEQERIFIIAKFPSDALALLDGGLKPQEINVGNQAPIPGTKFTMVTRTCA
HHHHHHCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCEECCCCCCCCCCCEEEEEEEEEE
VTPEDAAIYREIVKRGYELTGRMVPADPKNDFIELIAKKGL
CCCCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7947968 [H]