Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893051

Identifier: 51893051

GI number: 51893051

Start: 2056140

End: 2057360

Strand: Reverse

Name: 51893051

Synonym: STH1913

Alternate gene names: NA

Gene position: 2057360-2056140 (Counterclockwise)

Preceding gene: 51893055

Following gene: 51893050

Centisome position: 57.69

GC content: 74.69

Gene sequence:

>1221_bases
GTGCTCGCCGTTGTCAACGCACGGATCCTGACCGTCTCCGCCGGCGTGATCCCGTCCGGGGCCGTGCTGGTGGACGACGC
CGGCCGGATCGCGGCGGTCGGGGAACGGGTCGACGTACCGGAGGGAACAGAGATGATCGATGCCGGGGGGCGGACGCTCA
CCCCCGGGCTGGTGGACGGCTTCAGCCGTCTGGGGCTGATCAACGAGGGGCTCGGCTGGGCGGGCAGCGATGCCGACGAG
TCCACCGATCCCAACACGGCCCACGTGCGCGCCCTGGATGGCCTCTACCCCTTCGACCGGGGCATCGCCGAAGCCCACAC
CGGCGGCGTCACGACGGTGCACGTGGTGCCCGGCGGCAGCAACGTCCTGGCGGGGCAGGCGCTGGCGATCAAGCTGCGCA
GGGCGGTCGCAGCCGACGACCTGGTCCTCCGCCACCCCACCGGCGTGGCGGCCGGCCTGGGCGAGCGGCCGAAGGCCGCC
TACGGCGGGGAGAAGCGGATGCCGGCGACCCGCATGGGCGTCGCCGCCGTCCTGCGGGAGGCCTTGGTGAAGGCCCAGGA
GTACGACCCCGGGAAGGAGCGGGACCTGCGCTGCGAGGCGCTGCTGCCCGTCCTGCGGGGCGAGCTGCCGCTGCTGGTGG
AGGCGCACCGGGCGGATGACATCGTCACCGCCCTGCGGATCGGCCGGGAGTTCCGCATCCGCATCACGCTGCTGGGCGCG
ACCGAGGGCCACCTGGTGGCCGACCTCATCGCCGAGGCGGGGGCCGCGGTGGCGGCGGGGCCGTCCCTGGCCGCCCGGGG
CCGGCAGGAAACCCGGGACGTGGGCTTCCACCTGCCGCTTGCGCTGCACCGGCACGGGGTGCCCACCGCGATCGTCACCG
GCCATCCCCAGCTGGACCAACTGTACCTGAACGTCGCCGCCGCCCTGGCCGTGCGCGAGGGGCTGATGCCGGAGGAGGCG
CTCCGGGCGGTCACCCTGACCCCGGCGGAGATCCTGGGCGTGGCGGACCGGGTCGGCAGCATCGCCCCCGGCAGAGACGC
CGACCTGGTGCTCTGGGACGGCGACCCGCTGGAGCTCACCACCCGGGTGGCCTGGACGATGGTGGAGGGCAGGGTGGTCT
ACATGGATGACGACCGCGGGAGCGCCCACGGCGGCTGGGGACACGACGGACGGGAAGGCCCGGAGCCGGGCCGGCCCTGC
GGGGAGGTGAACGGGCGATGA

Upstream 100 bases:

>100_bases
CAGGGCGTCCGCCCGAGGGCGCAGGTCTACGGCCCCTGGAGGGATGGTTAACCGCACGAAGAATCATTGGAGCACAGGCC
ACAGCGAGAGGAGGAGCGCG

Downstream 100 bases:

>100_bases
CCAAGCTGGCGATCACCGGTGCGACGGTCTACCCCATCAGCCGGCCGCCCATGGCAGGCGCGACGCTGCTGGTGGGCGAC
GGGAAGATCCTGGCGGTGGG

Product: putative amidohydrolase

Products: NA

Alternate protein names: Amidohydrolase Family Protein; Amidohydrolase Imidazolonepropionase; Imidazolonepropionase; Imidazolonepropionase And Related Amidohydrolases; Dihydroorotase; Metal-Dependent Hydrolase Superfamily Protein; Amidohydrolase-Like Domain-Containing Protein; Metallo-Dependent Hydrolase; Secreted; N-Acetylglucosamine-6-Phosphate Deacetylase; Amidohodrolase; Imidazolonepropionase Or Related Amidohydrolase; Imidazolone-5-Propionate Hydrolase; Aminohydrolase; Amidohydrolase Protein

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MLAVVNARILTVSAGVIPSGAVLVDDAGRIAAVGERVDVPEGTEMIDAGGRTLTPGLVDGFSRLGLINEGLGWAGSDADE
STDPNTAHVRALDGLYPFDRGIAEAHTGGVTTVHVVPGGSNVLAGQALAIKLRRAVAADDLVLRHPTGVAAGLGERPKAA
YGGEKRMPATRMGVAAVLREALVKAQEYDPGKERDLRCEALLPVLRGELPLLVEAHRADDIVTALRIGREFRIRITLLGA
TEGHLVADLIAEAGAAVAAGPSLAARGRQETRDVGFHLPLALHRHGVPTAIVTGHPQLDQLYLNVAAALAVREGLMPEEA
LRAVTLTPAEILGVADRVGSIAPGRDADLVLWDGDPLELTTRVAWTMVEGRVVYMDDDRGSAHGGWGHDGREGPEPGRPC
GEVNGR

Sequences:

>Translated_406_residues
MLAVVNARILTVSAGVIPSGAVLVDDAGRIAAVGERVDVPEGTEMIDAGGRTLTPGLVDGFSRLGLINEGLGWAGSDADE
STDPNTAHVRALDGLYPFDRGIAEAHTGGVTTVHVVPGGSNVLAGQALAIKLRRAVAADDLVLRHPTGVAAGLGERPKAA
YGGEKRMPATRMGVAAVLREALVKAQEYDPGKERDLRCEALLPVLRGELPLLVEAHRADDIVTALRIGREFRIRITLLGA
TEGHLVADLIAEAGAAVAAGPSLAARGRQETRDVGFHLPLALHRHGVPTAIVTGHPQLDQLYLNVAAALAVREGLMPEEA
LRAVTLTPAEILGVADRVGSIAPGRDADLVLWDGDPLELTTRVAWTMVEGRVVYMDDDRGSAHGGWGHDGREGPEPGRPC
GEVNGR
>Mature_406_residues
MLAVVNARILTVSAGVIPSGAVLVDDAGRIAAVGERVDVPEGTEMIDAGGRTLTPGLVDGFSRLGLINEGLGWAGSDADE
STDPNTAHVRALDGLYPFDRGIAEAHTGGVTTVHVVPGGSNVLAGQALAIKLRRAVAADDLVLRHPTGVAAGLGERPKAA
YGGEKRMPATRMGVAAVLREALVKAQEYDPGKERDLRCEALLPVLRGELPLLVEAHRADDIVTALRIGREFRIRITLLGA
TEGHLVADLIAEAGAAVAAGPSLAARGRQETRDVGFHLPLALHRHGVPTAIVTGHPQLDQLYLNVAAALAVREGLMPEEA
LRAVTLTPAEILGVADRVGSIAPGRDADLVLWDGDPLELTTRVAWTMVEGRVVYMDDDRGSAHGGWGHDGREGPEPGRPC
GEVNGR

Specific function: Unknown

COG id: COG1228

COG function: function code Q; Imidazolonepropionase and related amidohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42463; Mature: 42463

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAVVNARILTVSAGVIPSGAVLVDDAGRIAAVGERVDVPEGTEMIDAGGRTLTPGLVDG
CEEEEEEEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCHHECCCCCEECCHHHHH
FSRLGLINEGLGWAGSDADESTDPNTAHVRALDGLYPFDRGIAEAHTGGVTTVHVVPGGS
HHHHCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCEEEEEEECCCC
NVLAGQALAIKLRRAVAADDLVLRHPTGVAAGLGERPKAAYGGEKRMPATRMGVAAVLRE
CEECCHHHHHHHHHHHHHCCEEEECCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ALVKAQEYDPGKERDLRCEALLPVLRGELPLLVEAHRADDIVTALRIGREFRIRITLLGA
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCEEEEEEEEEEC
TEGHLVADLIAEAGAAVAAGPSLAARGRQETRDVGFHLPLALHRHGVPTAIVTGHPQLDQ
CCCHHHHHHHHHCCCCEECCCHHHHCCCHHHHHCCEECCHHHHCCCCCEEEEECCCCHHH
LYLNVAAALAVREGLMPEEALRAVTLTPAEILGVADRVGSIAPGRDADLVLWDGDPLELT
HHHHHHHHHHHHHCCCCHHHHHEEECCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEE
TRVAWTMVEGRVVYMDDDRGSAHGGWGHDGREGPEPGRPCGEVNGR
HEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAVVNARILTVSAGVIPSGAVLVDDAGRIAAVGERVDVPEGTEMIDAGGRTLTPGLVDG
CEEEEEEEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCHHECCCCCEECCHHHHH
FSRLGLINEGLGWAGSDADESTDPNTAHVRALDGLYPFDRGIAEAHTGGVTTVHVVPGGS
HHHHCHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCEEEEEEECCCC
NVLAGQALAIKLRRAVAADDLVLRHPTGVAAGLGERPKAAYGGEKRMPATRMGVAAVLRE
CEECCHHHHHHHHHHHHHCCEEEECCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
ALVKAQEYDPGKERDLRCEALLPVLRGELPLLVEAHRADDIVTALRIGREFRIRITLLGA
HHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCEEEEEEEEEEC
TEGHLVADLIAEAGAAVAAGPSLAARGRQETRDVGFHLPLALHRHGVPTAIVTGHPQLDQ
CCCHHHHHHHHHCCCCEECCCHHHHCCCHHHHHCCEECCHHHHCCCCCEEEEECCCCHHH
LYLNVAAALAVREGLMPEEALRAVTLTPAEILGVADRVGSIAPGRDADLVLWDGDPLELT
HHHHHHHHHHHHHCCCCHHHHHEEECCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEE
TRVAWTMVEGRVVYMDDDRGSAHGGWGHDGREGPEPGRPCGEVNGR
HEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA