| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51893039
Identifier: 51893039
GI number: 51893039
Start: 2041693
End: 2042313
Strand: Reverse
Name: 51893039
Synonym: STH1901
Alternate gene names: NA
Gene position: 2042313-2041693 (Counterclockwise)
Preceding gene: 51893040
Following gene: 51893038
Centisome position: 57.27
GC content: 66.67
Gene sequence:
>621_bases GTGGAAGAGTGTTTATACTGTTACCAAACCCATATGGGCGTCACCACTTCTAAGGGAGAGGGATGCACCATGAATATGTC GGTCCGTAAGATGGCGGTGGCCGGCTTGCTCGGCGCCGTCTCCGCTGCGCTGGGTTTGGTTCCGGGGCTCGGGTTCATCC CGTTCCCCACCGGTCAGGCGGTCACGATCATGCAGATCCCGGTCGTGCTGGCCGCCGTCGCCGAAGGTCCCGCCGTGGGC CTGTTCGTCGGCCTGATCTTCGGCCTCACCTCGTTCCTGCGGGCGACCAACCCGGCCTTCGCTGATCCGCTGGTCTCGAT CCTGCCCCGTCTGTTCATCGGCGTGTTCGCGGCGTACGCATTCGCCGCCCTCCGCCGCCGGAACCTGACCCTGGCCCTGG CCGCCGCCGGCGTGGTGGGCACCCTCACCAACACGGGGTTGGTGCTGGGCATGATCCTGCTCCGGGGATACTGGCCACCC GAGGTGGTCTGGACGGTGGCCGTCACCCACGCCCCGCTGGAGCTGCTGGTGGGCACCTTTGCCGTTGTGACGGTGGGTCT GGCCCTGCACCGGGCGGGCTATATCCGGGTCGCTTACCGGCCTTCCGGTCAGAACTCCTAG
Upstream 100 bases:
>100_bases CACGTACCCGATGGGCCACGCGATCTCGCCGGAGGAGCTGGCCGACATGGTTACCTGGGTCGAGCAGGGGCTTTCGCGCG CGATGGCCCCGTGACAACCG
Downstream 100 bases:
>100_bases AGCGCTTATGGCGGCCGCCCTCCGCGGGGAGGGCGGCCTTTCGAACATCGCGGAAAGGACGTGCTGCCCATGACGGATCC GGTTTGGCTGAGCGGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MEECLYCYQTHMGVTTSKGEGCTMNMSVRKMAVAGLLGAVSAALGLVPGLGFIPFPTGQAVTIMQIPVVLAAVAEGPAVG LFVGLIFGLTSFLRATNPAFADPLVSILPRLFIGVFAAYAFAALRRRNLTLALAAAGVVGTLTNTGLVLGMILLRGYWPP EVVWTVAVTHAPLELLVGTFAVVTVGLALHRAGYIRVAYRPSGQNS
Sequences:
>Translated_206_residues MEECLYCYQTHMGVTTSKGEGCTMNMSVRKMAVAGLLGAVSAALGLVPGLGFIPFPTGQAVTIMQIPVVLAAVAEGPAVG LFVGLIFGLTSFLRATNPAFADPLVSILPRLFIGVFAAYAFAALRRRNLTLALAAAGVVGTLTNTGLVLGMILLRGYWPP EVVWTVAVTHAPLELLVGTFAVVTVGLALHRAGYIRVAYRPSGQNS >Mature_206_residues MEECLYCYQTHMGVTTSKGEGCTMNMSVRKMAVAGLLGAVSAALGLVPGLGFIPFPTGQAVTIMQIPVVLAAVAEGPAVG LFVGLIFGLTSFLRATNPAFADPLVSILPRLFIGVFAAYAFAALRRRNLTLALAAAGVVGTLTNTGLVLGMILLRGYWPP EVVWTVAVTHAPLELLVGTFAVVTVGLALHRAGYIRVAYRPSGQNS
Specific function: Unknown
COG id: COG4684
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21519; Mature: 21519
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEECLYCYQTHMGVTTSKGEGCTMNMSVRKMAVAGLLGAVSAALGLVPGLGFIPFPTGQA CCHHHHHHHHHCCCEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE VTIMQIPVVLAAVAEGPAVGLFVGLIFGLTSFLRATNPAFADPLVSILPRLFIGVFAAYA EHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH FAALRRRNLTLALAAAGVVGTLTNTGLVLGMILLRGYWPPEVVWTVAVTHAPLELLVGTF HHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHHHHHHHHHHHH AVVTVGLALHRAGYIRVAYRPSGQNS HHHHHHHHHHCCCEEEEEECCCCCCC >Mature Secondary Structure MEECLYCYQTHMGVTTSKGEGCTMNMSVRKMAVAGLLGAVSAALGLVPGLGFIPFPTGQA CCHHHHHHHHHCCCEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE VTIMQIPVVLAAVAEGPAVGLFVGLIFGLTSFLRATNPAFADPLVSILPRLFIGVFAAYA EHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH FAALRRRNLTLALAAAGVVGTLTNTGLVLGMILLRGYWPPEVVWTVAVTHAPLELLVGTF HHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEHHHHHHHHHHHHHH AVVTVGLALHRAGYIRVAYRPSGQNS HHHHHHHHHHCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA