Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893037

Identifier: 51893037

GI number: 51893037

Start: 2040204

End: 2040533

Strand: Reverse

Name: 51893037

Synonym: STH1899

Alternate gene names: NA

Gene position: 2040533-2040204 (Counterclockwise)

Preceding gene: 51893038

Following gene: 51893036

Centisome position: 57.22

GC content: 71.52

Gene sequence:

>330_bases
ATGGATGACGGCTTTGCGGCCAAGCTGCTCTCCAACTTCCTGATCGCCCTGGGCGTGACCCTGGGCGGCTCGCTCTCGGG
CGCCGCCGCATCGCTGCTGTCCGGCGGCCACCCGCTCGACCGGCTCCGCTACCTGTCAGAAGACCTGCGGCTCTGGGGCA
TCCTGGTGGCCGTGAGCGGCTCCTTCGAGCCGCTCCGCACCCTGGAGCAGGGGCTCCTGTTCGGGCAGGGCCGCGCCCTG
GTCCGGCAGGTGGTGGCCCTGGTGGTCGCCATGGCCGGCGCCAACGTGGCCTACTTCCTTATCCAGACCGTGGCGGGGCG
GCGGCTGTGA

Upstream 100 bases:

>100_bases
GTGTCGTCCAACCGGGTGGACGAGCCGGCGGGCGCCGCACGCCTCCTGGTTCTGGACTCGTCCCCCGGGGCGTACTCTCC
CCCCAGAGGGGGATGGGACG

Downstream 100 bases:

>100_bases
GCCGGTGGCAGCGTGCGCTGCCCCTGCTGGCCTCGTTCGCGATGGGCTTTGCCGTGGCGATCTGGCTGCTGCCCGTCATG
GCCGGGCCGACGGTGCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDDGFAAKLLSNFLIALGVTLGGSLSGAAASLLSGGHPLDRLRYLSEDLRLWGILVAVSGSFEPLRTLEQGLLFGQGRAL
VRQVVALVVAMAGANVAYFLIQTVAGRRL

Sequences:

>Translated_109_residues
MDDGFAAKLLSNFLIALGVTLGGSLSGAAASLLSGGHPLDRLRYLSEDLRLWGILVAVSGSFEPLRTLEQGLLFGQGRAL
VRQVVALVVAMAGANVAYFLIQTVAGRRL
>Mature_109_residues
MDDGFAAKLLSNFLIALGVTLGGSLSGAAASLLSGGHPLDRLRYLSEDLRLWGILVAVSGSFEPLRTLEQGLLFGQGRAL
VRQVVALVVAMAGANVAYFLIQTVAGRRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11441; Mature: 11441

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDGFAAKLLSNFLIALGVTLGGSLSGAAASLLSGGHPLDRLRYLSEDLRLWGILVAVSG
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
SFEPLRTLEQGLLFGQGRALVRQVVALVVAMAGANVAYFLIQTVAGRRL
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDDGFAAKLLSNFLIALGVTLGGSLSGAAASLLSGGHPLDRLRYLSEDLRLWGILVAVSG
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
SFEPLRTLEQGLLFGQGRALVRQVVALVVAMAGANVAYFLIQTVAGRRL
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA