| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is spoIIIAE [H]
Identifier: 51892996
GI number: 51892996
Start: 1999892
End: 2001079
Strand: Reverse
Name: spoIIIAE [H]
Synonym: STH1858
Alternate gene names: 51892996
Gene position: 2001079-1999892 (Counterclockwise)
Preceding gene: 51892997
Following gene: 51892995
Centisome position: 56.11
GC content: 69.36
Gene sequence:
>1188_bases GTGCGGAGCGTGAAGCGCACGTGGTGGTGGGTCCTGCTCCTGCTCGCAGTGGCGCTGACGGCCCTCCCGGCGTCAGCCGA GGGGCCGGCGGCGCCCGGCGGGCTGCTGTGGGAGCAGGCGGCGGCGCTGGACACGAGCGCCATCGAACGCTTCCTGGACG AGGTGAACCGGACCTGGGAAGGATACGGGCCCCAGATCACCCTCGGCGACTTCCTGCGGCTGTCCAGCGGCGAGGACTCC CCGTCTCTGTCGGCCGGGGCCATCCTCCAGGGGCTGCTCCGGTACCTGGTCCGCGAGGTGCTGGCCAACGCCGACCTGCT CATGAAGCTGGTGGTGCTCGCGATCACCGCGGCCGTGCTGGGGCAGATGCAGTCCGCGATGGGCGCGGACGCCGCCGGCT CCGTCGCCTACTGGGTCATCTACCTGGTGCTGGTGGGGCTGGCGATCACCGGGTTCGGCCTGGCCGTCGGCGCCGCCCGC CAGGTGATGGAGAGCCTGAATGCGTTCATGCTGGCCGTGCTCCCGACCCTGCTCACCGTGCTCATCGCCCTGGGCGGGGC CGCCACGGCGGCGATCTTCCAGCCGCTGATGGTGACCATGCTCAACGTGACGAGCACCGTCATGGTGAACGTGGTCTTTC CCCTGGCCTTCCTGGCGGCGGTGCTGGACATCGTCTCGGGGCTGCATGAGAAGTACCGGCTCTCCAACCTGGCCCATCTG CTGCGCCAGGGCGCCACGGTGACCCTGGGCGCGACCGGGACGGTCTTCCTGGGCACCGTGGCGGTCAAGGGCGCTGCGGG GGCGGTGGCCGACGGCCTCTCGGTGAAGGCGGCCAAGTTTGTCACGGGGTCGTTCGTCCCCGTCATCGGCAAGACCCTGG CGGACGCCACCGACCTGATCGTCGGCTCCTCGCTGCTGCTGAAGAACGCGCTGGGCATGCTCGGGGCCACGGCCATCTTC TTCATCGTCGCCTTTCCCCTGCTGAAGATCCTGAGCATCTCCTGGGTCTACCAGGTGGCCGGAGCCCTGGTCCAGCCCGC CGGGGCCGGCGAGATCGCCCGGATGCTGACCACCATGGCCAAGTCGCTGTACATGCTCTTCGCGGCGGTGGGCATGGTCG CCCTGATGTTCTTCATCTCGGTGGTGGTCATCGTGGGTTCGGCCAACGTGGCCGTGATGGTGAGGTGA
Upstream 100 bases:
>100_bases CCACCAAGGTGGAGATGGCGGGCAAAATCATCATCATGCTGCTGGCGGTGCCGATCATCCTCGGGGTGCTCGACGCCATC CTGAACTTGCTGGGGTAGGG
Downstream 100 bases:
>100_bases GGCCATGGCCGCGCTGACGGAGTGGGTGCGGGGCCTGGTGGTGCTGGTGGTGCTGGCCTCGCTTCTGGAGATGCTCCTGC CCATGGGCGGGATGAAGCGC
Product: stage III sporulation protein AE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MRSVKRTWWWVLLLLAVALTALPASAEGPAAPGGLLWEQAAALDTSAIERFLDEVNRTWEGYGPQITLGDFLRLSSGEDS PSLSAGAILQGLLRYLVREVLANADLLMKLVVLAITAAVLGQMQSAMGADAAGSVAYWVIYLVLVGLAITGFGLAVGAAR QVMESLNAFMLAVLPTLLTVLIALGGAATAAIFQPLMVTMLNVTSTVMVNVVFPLAFLAAVLDIVSGLHEKYRLSNLAHL LRQGATVTLGATGTVFLGTVAVKGAAGAVADGLSVKAAKFVTGSFVPVIGKTLADATDLIVGSSLLLKNALGMLGATAIF FIVAFPLLKILSISWVYQVAGALVQPAGAGEIARMLTTMAKSLYMLFAAVGMVALMFFISVVVIVGSANVAVMVR
Sequences:
>Translated_395_residues MRSVKRTWWWVLLLLAVALTALPASAEGPAAPGGLLWEQAAALDTSAIERFLDEVNRTWEGYGPQITLGDFLRLSSGEDS PSLSAGAILQGLLRYLVREVLANADLLMKLVVLAITAAVLGQMQSAMGADAAGSVAYWVIYLVLVGLAITGFGLAVGAAR QVMESLNAFMLAVLPTLLTVLIALGGAATAAIFQPLMVTMLNVTSTVMVNVVFPLAFLAAVLDIVSGLHEKYRLSNLAHL LRQGATVTLGATGTVFLGTVAVKGAAGAVADGLSVKAAKFVTGSFVPVIGKTLADATDLIVGSSLLLKNALGMLGATAIF FIVAFPLLKILSISWVYQVAGALVQPAGAGEIARMLTTMAKSLYMLFAAVGMVALMFFISVVVIVGSANVAVMVR >Mature_395_residues MRSVKRTWWWVLLLLAVALTALPASAEGPAAPGGLLWEQAAALDTSAIERFLDEVNRTWEGYGPQITLGDFLRLSSGEDS PSLSAGAILQGLLRYLVREVLANADLLMKLVVLAITAAVLGQMQSAMGADAAGSVAYWVIYLVLVGLAITGFGLAVGAAR QVMESLNAFMLAVLPTLLTVLIALGGAATAAIFQPLMVTMLNVTSTVMVNVVFPLAFLAAVLDIVSGLHEKYRLSNLAHL LRQGATVTLGATGTVFLGTVAVKGAAGAVADGLSVKAAKFVTGSFVPVIGKTLADATDLIVGSSLLLKNALGMLGATAIF FIVAFPLLKILSISWVYQVAGALVQPAGAGEIARMLTTMAKSLYMLFAAVGMVALMFFISVVVIVGSANVAVMVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014194 [H]
Pfam domain/function: PF09546 Spore_III_AE [H]
EC number: NA
Molecular weight: Translated: 41009; Mature: 41009
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSVKRTWWWVLLLLAVALTALPASAEGPAAPGGLLWEQAAALDTSAIERFLDEVNRTWE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHC GYGPQITLGDFLRLSSGEDSPSLSAGAILQGLLRYLVREVLANADLLMKLVVLAITAAVL CCCCEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GQMQSAMGADAAGSVAYWVIYLVLVGLAITGFGLAVGAARQVMESLNAFMLAVLPTLLTV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIALGGAATAAIFQPLMVTMLNVTSTVMVNVVFPLAFLAAVLDIVSGLHEKYRLSNLAHL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQGATVTLGATGTVFLGTVAVKGAAGAVADGLSVKAAKFVTGSFVPVIGKTLADATDLI HHCCCEEEECCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH VGSSLLLKNALGMLGATAIFFIVAFPLLKILSISWVYQVAGALVQPAGAGEIARMLTTMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KSLYMLFAAVGMVALMFFISVVVIVGSANVAVMVR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC >Mature Secondary Structure MRSVKRTWWWVLLLLAVALTALPASAEGPAAPGGLLWEQAAALDTSAIERFLDEVNRTWE CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHC GYGPQITLGDFLRLSSGEDSPSLSAGAILQGLLRYLVREVLANADLLMKLVVLAITAAVL CCCCEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GQMQSAMGADAAGSVAYWVIYLVLVGLAITGFGLAVGAARQVMESLNAFMLAVLPTLLTV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIALGGAATAAIFQPLMVTMLNVTSTVMVNVVFPLAFLAAVLDIVSGLHEKYRLSNLAHL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQGATVTLGATGTVFLGTVAVKGAAGAVADGLSVKAAKFVTGSFVPVIGKTLADATDLI HHCCCEEEECCCCHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH VGSSLLLKNALGMLGATAIFFIVAFPLLKILSISWVYQVAGALVQPAGAGEIARMLTTMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH KSLYMLFAAVGMVALMFFISVVVIVGSANVAVMVR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]