| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is spoIIIAG [H]
Identifier: 51892994
GI number: 51892994
Start: 1998600
End: 1999232
Strand: Reverse
Name: spoIIIAG [H]
Synonym: STH1856
Alternate gene names: 51892994
Gene position: 1999232-1998600 (Counterclockwise)
Preceding gene: 51892995
Following gene: 51892993
Centisome position: 56.06
GC content: 70.93
Gene sequence:
>633_bases ATGGGTGAGCGGAAGGCGCCGGGGAACGGCCCCGGCAGCCCGTGGAGCTGGCTGGGGCTCGGGCTCTCGAAGGAGCAGGC GAAGCTGGTGCCCTTGATCGCGGTGCTGCTGTTCATCGGCATCCTGATGCTCCAGTCGGACGAGCTGTTCGGGATCGACG CGGACAGCCCGCCCCTGGATCCCGCCCCCGGGGCCTCGCTGGTGGGGCCGGTGGGCGCCGAGGATGAGCTGACCCGCCTG GAGCGGCAGAAGGCCGCGGAGTTGGAGGAGATGCTGGGGCAGATCGAGGGGGCGGGCCGGGTGAGGGTCATGGTCACCCT GGCGGCCGGGCCGGCGATCCAGGTGGTGAAGAACACCACGGTGGACCAGTCCACCACCACGGAGGAGGCGGCGGACAGCT CCACCCGCCGGATCGAATCCATCAACACCCGGGAGGATCACGTGTTCACCCGGAGCGGTTCTTCCGAGCAGCCCGTGATC GCCCAGACCAGCGCGCCGGAGATCGCCGGGGTGCTGATCGTGGCCGAGGGCGCCCGGGACGTGCGCATCCGGGCGCGGCT CCTGGACGCGGCCATGGTGGCCCTCAACGTTCCCGCCAACCGGATTCAGGTGGTGCCCGCAGATGGGAGGTAG
Upstream 100 bases:
>100_bases GAAACGGTTCGGCGGCAGGTGGCCGAACAGCTGGGTCTGACCGACGCAAGCCAGGTGACCGTTTGGATCGAGAGCGTGGA CGCGGCGGGGAGGTAGTGGC
Downstream 100 bases:
>100_bases CGCGGTGTTCGTGGTCAAGCGGGGTTCGGACCTGCTCAGGTTCGCACTGTACGTGCTGGTGGTCGCGTCCCTGGTGTGGT ACGTGGTGAGCCGGTTCGGC
Product: stage III sporulation protein AG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGERKAPGNGPGSPWSWLGLGLSKEQAKLVPLIAVLLFIGILMLQSDELFGIDADSPPLDPAPGASLVGPVGAEDELTRL ERQKAAELEEMLGQIEGAGRVRVMVTLAAGPAIQVVKNTTVDQSTTTEEAADSSTRRIESINTREDHVFTRSGSSEQPVI AQTSAPEIAGVLIVAEGARDVRIRARLLDAAMVALNVPANRIQVVPADGR
Sequences:
>Translated_210_residues MGERKAPGNGPGSPWSWLGLGLSKEQAKLVPLIAVLLFIGILMLQSDELFGIDADSPPLDPAPGASLVGPVGAEDELTRL ERQKAAELEEMLGQIEGAGRVRVMVTLAAGPAIQVVKNTTVDQSTTTEEAADSSTRRIESINTREDHVFTRSGSSEQPVI AQTSAPEIAGVLIVAEGARDVRIRARLLDAAMVALNVPANRIQVVPADGR >Mature_209_residues GERKAPGNGPGSPWSWLGLGLSKEQAKLVPLIAVLLFIGILMLQSDELFGIDADSPPLDPAPGASLVGPVGAEDELTRLE RQKAAELEEMLGQIEGAGRVRVMVTLAAGPAIQVVKNTTVDQSTTTEEAADSSTRRIESINTREDHVFTRSGSSEQPVIA QTSAPEIAGVLIVAEGARDVRIRARLLDAAMVALNVPANRIQVVPADGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014195 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22148; Mature: 22016
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGERKAPGNGPGSPWSWLGLGLSKEQAKLVPLIAVLLFIGILMLQSDELFGIDADSPPLD CCCCCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC PAPGASLVGPVGAEDELTRLERQKAAELEEMLGQIEGAGRVRVMVTLAAGPAIQVVKNTT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCC VDQSTTTEEAADSSTRRIESINTREDHVFTRSGSSEQPVIAQTSAPEIAGVLIVAEGARD CCCCCCHHHHHCHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCC VRIRARLLDAAMVALNVPANRIQVVPADGR HHHHHHHHHHHHHEEECCCCEEEEEECCCC >Mature Secondary Structure GERKAPGNGPGSPWSWLGLGLSKEQAKLVPLIAVLLFIGILMLQSDELFGIDADSPPLD CCCCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC PAPGASLVGPVGAEDELTRLERQKAAELEEMLGQIEGAGRVRVMVTLAAGPAIQVVKNTT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECCC VDQSTTTEEAADSSTRRIESINTREDHVFTRSGSSEQPVIAQTSAPEIAGVLIVAEGARD CCCCCCHHHHHCHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCC VRIRARLLDAAMVALNVPANRIQVVPADGR HHHHHHHHHHHHHEEECCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]