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The map label for this gene is ywhC [H]

Identifier: 51892942

GI number: 51892942

Start: 1946074

End: 1946706

Strand: Reverse

Name: ywhC [H]

Synonym: STH1804

Alternate gene names: 51892942

Gene position: 1946706-1946074 (Counterclockwise)

Preceding gene: 51892943

Following gene: 51892941

Centisome position: 54.59

GC content: 68.4

Gene sequence:

>633_bases
TTGGCACTGCCCAGCCTGCAGCAGATCGTGATGCTCATCCCCGGCGTCGTCATGGGCTTCGCGTTCCACGAGTTCGGTCA
CGCGCTGGTGGCCACCTGGTTCGGCGACGACACGCCGCGCCTGCAGGGCCGGCTGACCCTGAACCCCGTGGCCCACCTGG
ATCCCGTCGGCACCCTCCTGCTCCTGCTGGGGGGCATCGGCTGGGCCAAGCCCGTCATGGTGAACCCCGCCCGGCTGCGG
CCCCGGGTCCTGGGAGACATTGCGGTCTCCCTGGCCGGGGTGGCCATGAACTTCCTCCTGGCGCTGGTCTTCGTGGTGCT
CTTCGTCCTCGCGGAGACCGGCCGGCTGGGGTGGCAGCACCCGGTGCTGAGCGAGACGCTGTACCTGGTCGTCATGGTCA
ACGTGTTCCTCGTGGGGTTCAACCTGCTGCCGATCCCGCCGCTGGACGGCTTCCGGGTCCTGGCGTATGCCTTCCCGCCG
GGGGCGCACCAACTGGTCCAGACCCTGTACCGGTTCGGCCCGCTCCTGCTGATCTTCCTGTTCGTCACGGACCTGATCGA
CCTCTCGCCGATCTACACCGGCATCTTCAACGCGGTGGTCTGGGTCGCGTCGCCGCTGCTTCGGCTGCTGTAG

Upstream 100 bases:

>100_bases
AGCGGGTGCTGGCCGCCCGGCTCTCGGGCGAGGCCCCGGACCGGGCGGCGCAGTTGGAGCTGGCCCGCCGCCACGCAGCC
CAACAGGAGGAGTGAACCGC

Downstream 100 bases:

>100_bases
CGTTGCCAGGGATGCTGAAATGCATGTAATATAAAGAGGTTGTATGAAGTCCGGGGCTGCGCGGCCCGGAGAGAGGGGGT
ACGGGTGTGGATCGCTCCAC

Product: metal-dependent peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MALPSLQQIVMLIPGVVMGFAFHEFGHALVATWFGDDTPRLQGRLTLNPVAHLDPVGTLLLLLGGIGWAKPVMVNPARLR
PRVLGDIAVSLAGVAMNFLLALVFVVLFVLAETGRLGWQHPVLSETLYLVVMVNVFLVGFNLLPIPPLDGFRVLAYAFPP
GAHQLVQTLYRFGPLLLIFLFVTDLIDLSPIYTGIFNAVVWVASPLLRLL

Sequences:

>Translated_210_residues
MALPSLQQIVMLIPGVVMGFAFHEFGHALVATWFGDDTPRLQGRLTLNPVAHLDPVGTLLLLLGGIGWAKPVMVNPARLR
PRVLGDIAVSLAGVAMNFLLALVFVVLFVLAETGRLGWQHPVLSETLYLVVMVNVFLVGFNLLPIPPLDGFRVLAYAFPP
GAHQLVQTLYRFGPLLLIFLFVTDLIDLSPIYTGIFNAVVWVASPLLRLL
>Mature_209_residues
ALPSLQQIVMLIPGVVMGFAFHEFGHALVATWFGDDTPRLQGRLTLNPVAHLDPVGTLLLLLGGIGWAKPVMVNPARLRP
RVLGDIAVSLAGVAMNFLLALVFVVLFVLAETGRLGWQHPVLSETLYLVVMVNVFLVGFNLLPIPPLDGFRVLAYAFPPG
AHQLVQTLYRFGPLLLIFLFVTDLIDLSPIYTGIFNAVVWVASPLLRLL

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 22956; Mature: 22825

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPSLQQIVMLIPGVVMGFAFHEFGHALVATWFGDDTPRLQGRLTLNPVAHLDPVGTLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHCHHHHHH
LLLGGIGWAKPVMVNPARLRPRVLGDIAVSLAGVAMNFLLALVFVVLFVLAETGRLGWQH
HHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PVLSETLYLVVMVNVFLVGFNLLPIPPLDGFRVLAYAFPPGAHQLVQTLYRFGPLLLIFL
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
FVTDLIDLSPIYTGIFNAVVWVASPLLRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ALPSLQQIVMLIPGVVMGFAFHEFGHALVATWFGDDTPRLQGRLTLNPVAHLDPVGTLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHCHHHHHH
LLLGGIGWAKPVMVNPARLRPRVLGDIAVSLAGVAMNFLLALVFVVLFVLAETGRLGWQH
HHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PVLSETLYLVVMVNVFLVGFNLLPIPPLDGFRVLAYAFPPGAHQLVQTLYRFGPLLLIFL
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
FVTDLIDLSPIYTGIFNAVVWVASPLLRLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]