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The map label for this gene is 51892936

Identifier: 51892936

GI number: 51892936

Start: 1941168

End: 1942376

Strand: Reverse

Name: 51892936

Synonym: STH1798

Alternate gene names: NA

Gene position: 1942376-1941168 (Counterclockwise)

Preceding gene: 51892937

Following gene: 51892935

Centisome position: 54.47

GC content: 73.86

Gene sequence:

>1209_bases
GTGGACGCGCTGCGTGCCATGTGGAAGGGGACCATCAGCTTCGGGCTGGTGACGATCCCGGTCAAGCTGTACGCCGCGAC
GGAGTCGAAGGACCTGCGCTTCAACCTGCTCCACGAGCCCTGCCAGACGCCTGTGCAGTACCGGAAGTACTGCCCGACCT
GCGAGCGGGAGGTCGAGAGCGGCGAGATCGTCAAGGGATACGAGTTTGACCGCGGACGCTATGTGACGCTGCGGGACGAG
GACTTCGAATCGATCCCGCTCGCGGCCCGGCGGACGCTGGAGATCGTGGCGTTCGTGCGCCTCGAGGAGATCGACCCGAT
CTACTTCGACAAGACCTACTATCTCGAGCCCGGCGAGGGCGGCGCCAAGGCCTACGGCCTGCTGCGCCACGCGATGGAGG
TGACCGGGCGCGTGGCCATCGCGCGGGTAGTCCTGCGCGCAAAGGAGTCGCTGGCAGCCCTGCGCGTCTTCCGGGAGGGC
GTGCTCGCCATGGAGACGATGCACTTCCCCGACGAGGTCCGGCCGGTGGCTGCCCTCACCGGCATCGCCCAGCCGGAGTT
GCGCCCGCAGGAGATCGAGATGGCCACCGGGCTGATCGAGTCGCTGACGATGCCGTTCTCGCCTGAGCGGTTTGAAAACA
CGTACCGAGAGGCGCTGCTGGAGTTGATCCAGGCGAAGATCGCCGGGGCGCCTCCGGCCGAGCCCGGGCCGGCCCCGGAG
CAGGGTCGGGTGGTCGACCTGATGGAGGCCTTGCGGGCCTCGATCCGTGCGGCGGAGGCGCAGCGCGCCGCGGGCGGGGC
GACGGGCGGCGCCGCAGGCGCGGACGGCACCCCGCCAGCTCCAGTGGCCAGGTCACCGGAGGCGCCCGCGCGGCGTGCGA
TCCCGGGACTGCCTGGCGACCCCGCGGCGTCCGTGCCCGGCGTGCCCGCAGCTCCCGTACCGCGTGCGCCGGGCGTGACC
GGGGCGCCCACCCCGGGTACGCCGCCCGCGGCCGTGCCGGGCGTGCCCGCGACGGCCGTGCCCGGCACGCCCGGGGCTCC
CGTGCCGACGGCGCCGGGCGTTCCCTCAGCGCCGGCCCCGGGTACGTCGCCCACGTCCGTGCCGGGCGTGCAGACCGCGC
CCAACGGGGCTGCCCCGCCCGGCCCGTTCGCTGGGAGCGACCGCGCGGCCGAGGTCGGGCCGGACGAGACGGCGCCCGGA
GGGCCGTAG

Upstream 100 bases:

>100_bases
CTCATGCCGAGGTTTCCGGCCGGGCGATGGTACGCCCGGCCTTTCCTTATGGTCTCCCGGAATAGCCCGAACTGCCGCGG
CTTACGCTAGGAACCGGGGG

Downstream 100 bases:

>100_bases
GCGTGCGGCTGCCCTTCCCGCCCATGCTGCTGGAGCGCGCCGAGGCCCCCTTTGCGGACGACGACTGGGTCTATCAGGTG
AAGTGGGACGGCGTGCGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MDALRAMWKGTISFGLVTIPVKLYAATESKDLRFNLLHEPCQTPVQYRKYCPTCEREVESGEIVKGYEFDRGRYVTLRDE
DFESIPLAARRTLEIVAFVRLEEIDPIYFDKTYYLEPGEGGAKAYGLLRHAMEVTGRVAIARVVLRAKESLAALRVFREG
VLAMETMHFPDEVRPVAALTGIAQPELRPQEIEMATGLIESLTMPFSPERFENTYREALLELIQAKIAGAPPAEPGPAPE
QGRVVDLMEALRASIRAAEAQRAAGGATGGAAGADGTPPAPVARSPEAPARRAIPGLPGDPAASVPGVPAAPVPRAPGVT
GAPTPGTPPAAVPGVPATAVPGTPGAPVPTAPGVPSAPAPGTSPTSVPGVQTAPNGAAPPGPFAGSDRAAEVGPDETAPG
GP

Sequences:

>Translated_402_residues
MDALRAMWKGTISFGLVTIPVKLYAATESKDLRFNLLHEPCQTPVQYRKYCPTCEREVESGEIVKGYEFDRGRYVTLRDE
DFESIPLAARRTLEIVAFVRLEEIDPIYFDKTYYLEPGEGGAKAYGLLRHAMEVTGRVAIARVVLRAKESLAALRVFREG
VLAMETMHFPDEVRPVAALTGIAQPELRPQEIEMATGLIESLTMPFSPERFENTYREALLELIQAKIAGAPPAEPGPAPE
QGRVVDLMEALRASIRAAEAQRAAGGATGGAAGADGTPPAPVARSPEAPARRAIPGLPGDPAASVPGVPAAPVPRAPGVT
GAPTPGTPPAAVPGVPATAVPGTPGAPVPTAPGVPSAPAPGTSPTSVPGVQTAPNGAAPPGPFAGSDRAAEVGPDETAPG
GP
>Mature_402_residues
MDALRAMWKGTISFGLVTIPVKLYAATESKDLRFNLLHEPCQTPVQYRKYCPTCEREVESGEIVKGYEFDRGRYVTLRDE
DFESIPLAARRTLEIVAFVRLEEIDPIYFDKTYYLEPGEGGAKAYGLLRHAMEVTGRVAIARVVLRAKESLAALRVFREG
VLAMETMHFPDEVRPVAALTGIAQPELRPQEIEMATGLIESLTMPFSPERFENTYREALLELIQAKIAGAPPAEPGPAPE
QGRVVDLMEALRASIRAAEAQRAAGGATGGAAGADGTPPAPVARSPEAPARRAIPGLPGDPAASVPGVPAAPVPRAPGVT
GAPTPGTPPAAVPGVPATAVPGTPGAPVPTAPGVPSAPAPGTSPTSVPGVQTAPNGAAPPGPFAGSDRAAEVGPDETAPG
GP

Specific function: Could be involved in DNA repair

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1798_SYMTH (Q67NG0)

Other databases:

- EMBL:   AP006840
- RefSeq:   YP_075627.1
- ProteinModelPortal:   Q67NG0
- GeneID:   2982370
- GenomeReviews:   AP006840_GR
- KEGG:   sth:STH1798
- NMPDR:   fig|292459.1.peg.1735
- HOGENOM:   HBG492008
- OMA:   AYADIAK
- BioCyc:   STHE292459:STH1798-MONOMER
- HAMAP:   MF_01875
- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194
- SMART:   SM00559
- TIGRFAMs:   TIGR02772

Pfam domain/function: PF02735 Ku; SSF100939 SPOC-like

EC number: NA

Molecular weight: Translated: 41840; Mature: 41840

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALRAMWKGTISFGLVTIPVKLYAATESKDLRFNLLHEPCQTPVQYRKYCPTCEREVES
CHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCEEHHHHHHHCCHHHHHHHCCHHHHHCCC
GEIVKGYEFDRGRYVTLRDEDFESIPLAARRTLEIVAFVRLEEIDPIYFDKTYYLEPGEG
CCEEECEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEECCCCC
GAKAYGLLRHAMEVTGRVAIARVVLRAKESLAALRVFREGVLAMETMHFPDEVRPVAALT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GIAQPELRPQEIEMATGLIESLTMPFSPERFENTYREALLELIQAKIAGAPPAEPGPAPE
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QGRVVDLMEALRASIRAAEAQRAAGGATGGAAGADGTPPAPVARSPEAPARRAIPGLPGD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
PAASVPGVPAAPVPRAPGVTGAPTPGTPPAAVPGVPATAVPGTPGAPVPTAPGVPSAPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTSPTSVPGVQTAPNGAAPPGPFAGSDRAAEVGPDETAPGGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDALRAMWKGTISFGLVTIPVKLYAATESKDLRFNLLHEPCQTPVQYRKYCPTCEREVES
CHHHHHHHHHHHHHCEEEEEEEEEEECCCCCCEEHHHHHHHCCHHHHHHHCCHHHHHCCC
GEIVKGYEFDRGRYVTLRDEDFESIPLAARRTLEIVAFVRLEEIDPIYFDKTYYLEPGEG
CCEEECEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCEEEECCCCC
GAKAYGLLRHAMEVTGRVAIARVVLRAKESLAALRVFREGVLAMETMHFPDEVRPVAALT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
GIAQPELRPQEIEMATGLIESLTMPFSPERFENTYREALLELIQAKIAGAPPAEPGPAPE
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
QGRVVDLMEALRASIRAAEAQRAAGGATGGAAGADGTPPAPVARSPEAPARRAIPGLPGD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC
PAASVPGVPAAPVPRAPGVTGAPTPGTPPAAVPGVPATAVPGTPGAPVPTAPGVPSAPAP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTSPTSVPGVQTAPNGAAPPGPFAGSDRAAEVGPDETAPGGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA