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The map label for this gene is yvbX [H]

Identifier: 51892928

GI number: 51892928

Start: 1932256

End: 1933602

Strand: Reverse

Name: yvbX [H]

Synonym: STH1790

Alternate gene names: 51892928

Gene position: 1933602-1932256 (Counterclockwise)

Preceding gene: 51892932

Following gene: 51892926

Centisome position: 54.22

GC content: 70.45

Gene sequence:

>1347_bases
ATGGCGTCTGCGACTTCCCATACTGTTTCAGCATGCTTGTTCCAACATCCTTCGGCGCCGCACGGGCGGGTGAAGCGGCC
ACCCCGCCACCACCCCGCCAACAACTCCCAATTGGCAGGGAATCGCCATCACCGCTACAATCTAACACGACACATTTTCG
TGTTGGATTATATCGGGGGTGGGGCAGTGCGCAGGCTGGGGAGACCGCTCTGGGTGGGGTTGCTGATCGGGGCGCTGCTG
CTGGCAGGCACCGTGGTGGCCGGCGCACCCGGACTGCCGGCGGGGGCGCTGCCCGTCCCGGCGGAGCTCCAGTCCGGCCG
GTCATGGGTCCTGCCCGACCTGGCCGGCGACGGGTGGGTGGTGTTGACGGCCGAACCGCCGGCGGTGGACGAAGGGCCGG
TGGTGGTCGCCTACTACGCGGAGGACTGGGAGGGCGACGTACGCGCGCTGAACGCGCTGCGCAGGGCGGGGGCGCGCGTG
GACCGGGTCGTCAACTTCGCCCTGGAGCTGCACGCGGATGGCTCCGTCACGACCCGGTCCTACCCCGCCCTCGCCGCGGC
GGCCGCAGAGTTGGGAGTCCCCGTCTACGGTCTGGTCCACAACATGCAGAACGGTCAGTTCAGCGCCGAGATCGCCCGGG
CCGTGCTGTCCGATCCTGCGCGCCGGAGCCGCGCGGTGGCCGACATGCTGGCCATCGCCCGGGAGCACGGCCTGGCGGGC
ATCGACATCGACATCGAGAACGTGCCGGGCGACCTGCGCGCCGGCTACACCGCCCTGGCGGCGGAGGCGGCCGCGGTCCT
GAAGCCCGGCGGGATCCGGCTGACGCTGTCGGTGCCGGCCAAGACGTGGGACGACACCACCTCCAACTGGGGCGGCGCCT
TTGACTACGCCGCGTTGGGCGAGATCGCCGACGAGATCGCCATCATGGCCTACGACGAACACACCTGGGGCCTGCCCCAC
GGTCCGGTGGCGTCGCTGCCCTGGGTGGAGCGGGTCGTCGCGTACGCCGTGACCCAGATCCCGCCCGAGAAGATCCTGCT
CGGCATCCCGGCCTACGGCTACGACTGGATCGCCGGGACGCGGCAGGTTGTCGGCGGGCTCTCCACCGGCGGTGCGTACA
GCCTCGCGGCCAGGCACGGCGCCGAGGTGCGGTGGGACGACGAGGCCCAGGTTCCCTGGTTCCGCTACGTCGCCGACGGC
GCGGAGCATATCGTCTACTTCGAGAACAGCCGCTCCGCCGCGGCCAAGCTGCGACTGGTCGGGCGGTACGGTCTCGGCGG
GATCGCCATCTGGCGGCTGGGGCTCAATGAAGACGGCCTCTGGGAGGTCGTCGTGGACCATCTGTAG

Upstream 100 bases:

>100_bases
TGACCTGCTGTGCGATGGCCTTTCCGGTGATCTGGTCGAGGATGCCCATCCGTGGTGCCTCCCGTGTGGCGATGATCTGC
AGACCCTGACCTGTTCAGCT

Downstream 100 bases:

>100_bases
TCACCGGGATCCTCCGGTGCCCTCTTCCGGCGGCTGTAGCCCGGTGGCGCCCGGCGGCAGCGGATCGGGCGAGAGCATCT
CGCTCAGCGTGACCAGGCGG

Product: spore peptidoglycan hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MASATSHTVSACLFQHPSAPHGRVKRPPRHHPANNSQLAGNRHHRYNLTRHIFVLDYIGGGAVRRLGRPLWVGLLIGALL
LAGTVVAGAPGLPAGALPVPAELQSGRSWVLPDLAGDGWVVLTAEPPAVDEGPVVVAYYAEDWEGDVRALNALRRAGARV
DRVVNFALELHADGSVTTRSYPALAAAAAELGVPVYGLVHNMQNGQFSAEIARAVLSDPARRSRAVADMLAIAREHGLAG
IDIDIENVPGDLRAGYTALAAEAAAVLKPGGIRLTLSVPAKTWDDTTSNWGGAFDYAALGEIADEIAIMAYDEHTWGLPH
GPVASLPWVERVVAYAVTQIPPEKILLGIPAYGYDWIAGTRQVVGGLSTGGAYSLAARHGAEVRWDDEAQVPWFRYVADG
AEHIVYFENSRSAAAKLRLVGRYGLGGIAIWRLGLNEDGLWEVVVDHL

Sequences:

>Translated_448_residues
MASATSHTVSACLFQHPSAPHGRVKRPPRHHPANNSQLAGNRHHRYNLTRHIFVLDYIGGGAVRRLGRPLWVGLLIGALL
LAGTVVAGAPGLPAGALPVPAELQSGRSWVLPDLAGDGWVVLTAEPPAVDEGPVVVAYYAEDWEGDVRALNALRRAGARV
DRVVNFALELHADGSVTTRSYPALAAAAAELGVPVYGLVHNMQNGQFSAEIARAVLSDPARRSRAVADMLAIAREHGLAG
IDIDIENVPGDLRAGYTALAAEAAAVLKPGGIRLTLSVPAKTWDDTTSNWGGAFDYAALGEIADEIAIMAYDEHTWGLPH
GPVASLPWVERVVAYAVTQIPPEKILLGIPAYGYDWIAGTRQVVGGLSTGGAYSLAARHGAEVRWDDEAQVPWFRYVADG
AEHIVYFENSRSAAAKLRLVGRYGLGGIAIWRLGLNEDGLWEVVVDHL
>Mature_447_residues
ASATSHTVSACLFQHPSAPHGRVKRPPRHHPANNSQLAGNRHHRYNLTRHIFVLDYIGGGAVRRLGRPLWVGLLIGALLL
AGTVVAGAPGLPAGALPVPAELQSGRSWVLPDLAGDGWVVLTAEPPAVDEGPVVVAYYAEDWEGDVRALNALRRAGARVD
RVVNFALELHADGSVTTRSYPALAAAAAELGVPVYGLVHNMQNGQFSAEIARAVLSDPARRSRAVADMLAIAREHGLAGI
DIDIENVPGDLRAGYTALAAEAAAVLKPGGIRLTLSVPAKTWDDTTSNWGGAFDYAALGEIADEIAIMAYDEHTWGLPHG
PVASLPWVERVVAYAVTQIPPEKILLGIPAYGYDWIAGTRQVVGGLSTGGAYSLAARHGAEVRWDDEAQVPWFRYVADGA
EHIVYFENSRSAAAKLRLVGRYGLGGIAIWRLGLNEDGLWEVVVDHL

Specific function: Unknown

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011583
- InterPro:   IPR001223
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00704 Glyco_hydro_18 [H]

EC number: NA

Molecular weight: Translated: 47765; Mature: 47633

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASATSHTVSACLFQHPSAPHGRVKRPPRHHPANNSQLAGNRHHRYNLTRHIFVLDYIGG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEEEECCC
GAVRRLGRPLWVGLLIGALLLAGTVVAGAPGLPAGALPVPAELQSGRSWVLPDLAGDGWV
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCEE
VLTAEPPAVDEGPVVVAYYAEDWEGDVRALNALRRAGARVDRVVNFALELHADGSVTTRS
EEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHEEEEEEECCCCEECCC
YPALAAAAAELGVPVYGLVHNMQNGQFSAEIARAVLSDPARRSRAVADMLAIAREHGLAG
CCHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEE
IDIDIENVPGDLRAGYTALAAEAAAVLKPGGIRLTLSVPAKTWDDTTSNWGGAFDYAALG
EEEECCCCCCHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHH
EIADEIAIMAYDEHTWGLPHGPVASLPWVERVVAYAVTQIPPEKILLGIPAYGYDWIAGT
HHHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCHHHHCH
RQVVGGLSTGGAYSLAARHGAEVRWDDEAQVPWFRYVADGAEHIVYFENSRSAAAKLRLV
HHHHCCCCCCCCEEEHHHCCCCEEECCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEEE
GRYGLGGIAIWRLGLNEDGLWEVVVDHL
ECCCCCEEEEEEECCCCCCHHHHHHHCC
>Mature Secondary Structure 
ASATSHTVSACLFQHPSAPHGRVKRPPRHHPANNSQLAGNRHHRYNLTRHIFVLDYIGG
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECEEEEEEEEECCC
GAVRRLGRPLWVGLLIGALLLAGTVVAGAPGLPAGALPVPAELQSGRSWVLPDLAGDGWV
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEECCCCCCCCEE
VLTAEPPAVDEGPVVVAYYAEDWEGDVRALNALRRAGARVDRVVNFALELHADGSVTTRS
EEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCHHHHHHHEEEEEEECCCCEECCC
YPALAAAAAELGVPVYGLVHNMQNGQFSAEIARAVLSDPARRSRAVADMLAIAREHGLAG
CCHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEE
IDIDIENVPGDLRAGYTALAAEAAAVLKPGGIRLTLSVPAKTWDDTTSNWGGAFDYAALG
EEEECCCCCCHHHCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHH
EIADEIAIMAYDEHTWGLPHGPVASLPWVERVVAYAVTQIPPEKILLGIPAYGYDWIAGT
HHHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCHHHHCH
RQVVGGLSTGGAYSLAARHGAEVRWDDEAQVPWFRYVADGAEHIVYFENSRSAAAKLRLV
HHHHCCCCCCCCEEEHHHCCCCEEECCCCCCCHHHHHHCCCCEEEEEECCCCCEEEEEEE
GRYGLGGIAIWRLGLNEDGLWEVVVDHL
ECCCCCEEEEEEECCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]