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The map label for this gene is tdcF [C]

Identifier: 51892923

GI number: 51892923

Start: 1928959

End: 1929420

Strand: Reverse

Name: tdcF [C]

Synonym: STH1785

Alternate gene names: 51892923

Gene position: 1929420-1928959 (Counterclockwise)

Preceding gene: 51892924

Following gene: 51892921

Centisome position: 54.1

GC content: 68.18

Gene sequence:

>462_bases
ATGAGTGTCGAACAACGGTTGCAGGAACTGGGCATCACCATCCCGGAGGCGCCGAAGCCGGTGGCGGCCTACGTCCCCTT
CGTCCGCAGCGGTGACCTGGTCTTCACCAGCGGCCAGATCGCGGTGGAGGGCGGCCAGCTGAAGTACAAGGGCAAGGTGG
GCCGCGACCTGACCGCCGAGGAGGGGTACCAGGCGGCCCGGCTGTGCGCCATCAACACCCTTGCGGTGCTGAAGTCCGCG
GTGGGGTCGCTGGACAAGGTGGCCCAGATCGTCAAGGTGGTCGTGTTCGTCAACAGCGCCGACGGCTTCACGGGGCAGCC
GGCAGTGGCCAACGGCGCATCGGAGCTGTACCAGCAGGTCTTCGGCGAAGCCGGCCTCCACGCCCGGTCCGCCGTGGGCG
TGTCGGAGCTGCCCATGGACACCGCGGTGGAGGTCGAGGTGATCGCCCGCATCTCCGAATAG

Upstream 100 bases:

>100_bases
TCGGATTTTTGGCCGCACTTTACGTGTGCCAGTGGTTTTTTCGGTGACCTTATGGTAAAAATAGAGCGGACCGAACCCAG
GGAGGAGGCATACGCCGCAC

Downstream 100 bases:

>100_bases
GCGATGTAAGGCCGAGGGCAGGCTGCGCGGAGCAGCCTGTTCTTTGCTCAGTCGGCCAGCAGCCGGGTGATGTCGACGAT
GTAACGCCCGGGTGCGACGC

Product: hypothetical protein

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease L-Psp; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-PSP Superfamily; Translation Initiation Inhibitor Protein; Endoribonuclease; YjgF Family Translation Initiation Inhibitor; Transcription Regulator; L-PSP Family Endoribonuclease; Endoribonuclease Family Protein; Endoribonuclease L-PSP Family; Transcriptional Regulator; 2-Aminomuconate Deaminase; YjgF-Family Protein; Endoribonuclease-L-PSP Family Protein; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSVEQRLQELGITIPEAPKPVAAYVPFVRSGDLVFTSGQIAVEGGQLKYKGKVGRDLTAEEGYQAARLCAINTLAVLKSA
VGSLDKVAQIVKVVVFVNSADGFTGQPAVANGASELYQQVFGEAGLHARSAVGVSELPMDTAVEVEVIARISE

Sequences:

>Translated_153_residues
MSVEQRLQELGITIPEAPKPVAAYVPFVRSGDLVFTSGQIAVEGGQLKYKGKVGRDLTAEEGYQAARLCAINTLAVLKSA
VGSLDKVAQIVKVVVFVNSADGFTGQPAVANGASELYQQVFGEAGLHARSAVGVSELPMDTAVEVEVIARISE
>Mature_152_residues
SVEQRLQELGITIPEAPKPVAAYVPFVRSGDLVFTSGQIAVEGGQLKYKGKVGRDLTAEEGYQAARLCAINTLAVLKSAV
GSLDKVAQIVKVVVFVNSADGFTGQPAVANGASELYQQVFGEAGLHARSAVGVSELPMDTAVEVEVIARISE

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16033; Mature: 15901

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00369 PTS_HPR_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEQRLQELGITIPEAPKPVAAYVPFVRSGDLVFTSGQIAVEGGQLKYKGKVGRDLTAE
CCHHHHHHHCCCCCCCCCCCHHHHCCEEECCCEEEECCEEEEECCEEEECCCCCCCCCHH
EGYQAARLCAINTLAVLKSAVGSLDKVAQIVKVVVFVNSADGFTGQPAVANGASELYQQV
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHH
FGEAGLHARSAVGVSELPMDTAVEVEVIARISE
HHHCCCCHHHCCCCCCCCCCCHHHHHHEEEECC
>Mature Secondary Structure 
SVEQRLQELGITIPEAPKPVAAYVPFVRSGDLVFTSGQIAVEGGQLKYKGKVGRDLTAE
CHHHHHHHCCCCCCCCCCCHHHHCCEEECCCEEEECCEEEEECCEEEECCCCCCCCCHH
EGYQAARLCAINTLAVLKSAVGSLDKVAQIVKVVVFVNSADGFTGQPAVANGASELYQQV
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHH
FGEAGLHARSAVGVSELPMDTAVEVEVIARISE
HHHCCCCHHHCCCCCCCCCCCHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA