| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is mutL
Identifier: 51892886
GI number: 51892886
Start: 1893415
End: 1895322
Strand: Reverse
Name: mutL
Synonym: STH1748
Alternate gene names: 51892886
Gene position: 1895322-1893415 (Counterclockwise)
Preceding gene: 51892887
Following gene: 51892885
Centisome position: 53.15
GC content: 72.75
Gene sequence:
>1908_bases TTGGCCCGGATTCGCCTGCTCGACGAGCGGACGGCCAACCAGATCGCCGCGGGCGAGGTGGTGGAGCGGCCGGCCAGCGT GGTGAAGGAGCTGGTGGAGAACGCCCTGGACGCCCAGGCGAAGCGCATCGTGGTGGAGGTCAGCGGCGGTGGGCGGGAAC TGGTGCGGGTGACGGACGACGGCATCGGCATGGTGCCCGAGGACGCCCGGCTGGCCCTGCAGCGGCATGCGACCTCCAAG ATCCGCACCGCGGAGGACCTCAACGCCATCACCACCCTGGGGTTCCGCGGGGAGGCCCTGCCCTCCATCGCCGCGGTCTC CCAGTTCGAGCTGATCACCCGTCCCCACGACCAGCTGGCCGGCTACCGCATCCTGGCGGAAGGCGGCCAGATCGTCGCCG AAGGGGAGCACGGTTGCCCCGCCGGCACCCGGGTGACGGTGCGGGACCTGTTCTTTAACGTACCGGCGCGGCTGAAGTAC CTGAAGACCAACGCGACGGAGCTGGCCCAGATCGGCGACATCCTGACCCGCCTGGCCCTGGCGAACCCCGAGGTGGCCTT CCGGTTCCAGAGCGGTCAGGCCCAGGTGTTCGCCACGCCGGGAACCGGCGACCTGACGGCCGCCGTTGCGGCACTGCTGG GCCGGGAGATGGCAAAGGAGCTGCTCCCGGTCGACTACCGCAACGATGCCGCCCGGGTGCACGGGTTCGTGGGCCGGCCT ACCATCGCCCGGGCCGGGCGCAGCCATCAGTACTTCTTCGTCAACCGGCGGGCCGTGCGGACCATCGCCGCCCGGTATGC CCTGGAGGAGGCATATGCCCACCTCCTGCCCAACGGGCGCTACCCTGTCTGCATCCTCTTCATTGAGGTGGAGCCCCACG AGGTCGATGTAAACGTGCATCCCACCAAGGCCGAGGTCCGGTTCCAGCGGGACCGGGAGGTGCGGGCGGCCGTCTACCAG GCGGCCCGGCACGCCCTCGGCGCCGCCCTGCTGATTCCGGGCACCGAGGTCACGGCCGACGGGGAGGTCCGGGTGCCGGA CCGGGCGGAGGAGAAAGCGGCCCTGCAGCGGGGATGGGTTCCGCCTGGTGCCGGGCGGCCCGGCGAAGGGGGCGGGAGGG CCGCACCGCCGCCGTGGCGGGTATCGGCCGGCGGCCCGGGCGGGCAGACTACCGCCCGGGAGCCGGTGCAGGCCTACCTG CCCGCCGGCGGCCTGCAGGCGGCCCTGGCGCAGCGCGCGGCGGAGGAGGCCGCCGCCGCGGTGCCGGCAGTCGACCTGGC CGAGGCGACCCTCGTGCCCCGTTCCGCCGAGCCTGGCGAGCTGATCCGGGCGCTCCGGCCGCTGGGCCAGGTTCACCGCT CCTACATCGCCTGCGACGGGCCGGAGGGGCTCTACCTCATCGACCAGCATGCGGCCCACGAGCGCATCTTCTTCGAGCGG TTGTATGCGGCCGCGCAGGAGCAGGCCACTGCGGTGCAGCGGCTCCTCTTTCCGCTCACGCTGGACCTCACGCCCGCGCA GATGGCCATCTGGCAGGAGAACGCCGCCATCTTCGCCGAGAGCGGCTTCGAGGCGGAGCCCTTCGGCGGCAACACGCTGC TGATCCACGGGGTCCCCGCCGGCCTGGGGACGGATCACGTGGCCCGGCTGGTGTGCGACTTCCTGGACCGGCTGCAGGAG GACCAGGTGGCCCCCGGCACGCCGGTCACGGACCGGCGCCGGCGCGTCCTGGCCGCGATGGCGGCCTGCAAGGCGGCGAT CAAGGCGCGGGACCCGCTGCAGCCCGAGGACATCGCCGCGCTGCTCAGCGACCTGGCGGCCTGCGCGTCGCCCGAGACCT GTCCCCACGGGCGGCCGACCGTCATCTGCGTGTCCATATCCGAGCTGGAGAAGAGGTTCAAGCGGTGA
Upstream 100 bases:
>100_bases GCCCAGGAAGTAGAGAGCCTGACGGGCGGCGCCTCCGGCTGGGAAGGCGCCGCCGCAGTGTCACCGGCGGCTTCCGGGGC TCCGAGGCGGAGGTGAGAGC
Downstream 100 bases:
>100_bases AGCTGCCACTCGTGGTGCTGGTGGGCCCCACCGCAGTGGGCAAGACCGCCCTGTCCGTGGCGGTGGCCCAGGCGGTGGGG GCGGAGATCATATCCGGCGA
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MARIRLLDERTANQIAAGEVVERPASVVKELVENALDAQAKRIVVEVSGGGRELVRVTDDGIGMVPEDARLALQRHATSK IRTAEDLNAITTLGFRGEALPSIAAVSQFELITRPHDQLAGYRILAEGGQIVAEGEHGCPAGTRVTVRDLFFNVPARLKY LKTNATELAQIGDILTRLALANPEVAFRFQSGQAQVFATPGTGDLTAAVAALLGREMAKELLPVDYRNDAARVHGFVGRP TIARAGRSHQYFFVNRRAVRTIAARYALEEAYAHLLPNGRYPVCILFIEVEPHEVDVNVHPTKAEVRFQRDREVRAAVYQ AARHALGAALLIPGTEVTADGEVRVPDRAEEKAALQRGWVPPGAGRPGEGGGRAAPPPWRVSAGGPGGQTTAREPVQAYL PAGGLQAALAQRAAEEAAAAVPAVDLAEATLVPRSAEPGELIRALRPLGQVHRSYIACDGPEGLYLIDQHAAHERIFFER LYAAAQEQATAVQRLLFPLTLDLTPAQMAIWQENAAIFAESGFEAEPFGGNTLLIHGVPAGLGTDHVARLVCDFLDRLQE DQVAPGTPVTDRRRRVLAAMAACKAAIKARDPLQPEDIAALLSDLAACASPETCPHGRPTVICVSISELEKRFKR
Sequences:
>Translated_635_residues MARIRLLDERTANQIAAGEVVERPASVVKELVENALDAQAKRIVVEVSGGGRELVRVTDDGIGMVPEDARLALQRHATSK IRTAEDLNAITTLGFRGEALPSIAAVSQFELITRPHDQLAGYRILAEGGQIVAEGEHGCPAGTRVTVRDLFFNVPARLKY LKTNATELAQIGDILTRLALANPEVAFRFQSGQAQVFATPGTGDLTAAVAALLGREMAKELLPVDYRNDAARVHGFVGRP TIARAGRSHQYFFVNRRAVRTIAARYALEEAYAHLLPNGRYPVCILFIEVEPHEVDVNVHPTKAEVRFQRDREVRAAVYQ AARHALGAALLIPGTEVTADGEVRVPDRAEEKAALQRGWVPPGAGRPGEGGGRAAPPPWRVSAGGPGGQTTAREPVQAYL PAGGLQAALAQRAAEEAAAAVPAVDLAEATLVPRSAEPGELIRALRPLGQVHRSYIACDGPEGLYLIDQHAAHERIFFER LYAAAQEQATAVQRLLFPLTLDLTPAQMAIWQENAAIFAESGFEAEPFGGNTLLIHGVPAGLGTDHVARLVCDFLDRLQE DQVAPGTPVTDRRRRVLAAMAACKAAIKARDPLQPEDIAALLSDLAACASPETCPHGRPTVICVSISELEKRFKR >Mature_634_residues ARIRLLDERTANQIAAGEVVERPASVVKELVENALDAQAKRIVVEVSGGGRELVRVTDDGIGMVPEDARLALQRHATSKI RTAEDLNAITTLGFRGEALPSIAAVSQFELITRPHDQLAGYRILAEGGQIVAEGEHGCPAGTRVTVRDLFFNVPARLKYL KTNATELAQIGDILTRLALANPEVAFRFQSGQAQVFATPGTGDLTAAVAALLGREMAKELLPVDYRNDAARVHGFVGRPT IARAGRSHQYFFVNRRAVRTIAARYALEEAYAHLLPNGRYPVCILFIEVEPHEVDVNVHPTKAEVRFQRDREVRAAVYQA ARHALGAALLIPGTEVTADGEVRVPDRAEEKAALQRGWVPPGAGRPGEGGGRAAPPPWRVSAGGPGGQTTAREPVQAYLP AGGLQAALAQRAAEEAAAAVPAVDLAEATLVPRSAEPGELIRALRPLGQVHRSYIACDGPEGLYLIDQHAAHERIFFERL YAAAQEQATAVQRLLFPLTLDLTPAQMAIWQENAAIFAESGFEAEPFGGNTLLIHGVPAGLGTDHVARLVCDFLDRLQED QVAPGTPVTDRRRRVLAAMAACKAAIKARDPLQPEDIAALLSDLAACASPETCPHGRPTVICVSISELEKRFKR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=330, Percent_Identity=34.5454545454545, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI4505913, Length=336, Percent_Identity=29.7619047619048, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI310128478, Length=336, Percent_Identity=29.7619047619048, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI4505911, Length=358, Percent_Identity=27.9329608938547, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI189458898, Length=331, Percent_Identity=29.0030211480363, Blast_Score=135, Evalue=2e-31, Organism=Homo sapiens, GI189458896, Length=346, Percent_Identity=28.3236994219653, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI310128480, Length=289, Percent_Identity=28.0276816608997, Blast_Score=116, Evalue=8e-26, Organism=Homo sapiens, GI263191589, Length=236, Percent_Identity=28.8135593220339, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI91992162, Length=339, Percent_Identity=24.7787610619469, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI91992160, Length=339, Percent_Identity=24.7787610619469, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI310128484, Length=219, Percent_Identity=25.1141552511416, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI310128482, Length=219, Percent_Identity=25.1141552511416, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI310128486, Length=215, Percent_Identity=24.6511627906977, Blast_Score=73, Evalue=7e-13, Organism=Escherichia coli, GI1790612, Length=335, Percent_Identity=41.1940298507463, Blast_Score=236, Evalue=3e-63, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=34.0625, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17562796, Length=376, Percent_Identity=25.2659574468085, Blast_Score=128, Evalue=9e-30, Organism=Saccharomyces cerevisiae, GI6323819, Length=320, Percent_Identity=33.125, Blast_Score=179, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6324247, Length=351, Percent_Identity=26.2108262108262, Blast_Score=121, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6325093, Length=173, Percent_Identity=31.2138728323699, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323063, Length=161, Percent_Identity=30.4347826086957, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI17136968, Length=351, Percent_Identity=35.042735042735, Blast_Score=208, Evalue=1e-53, Organism=Drosophila melanogaster, GI17136970, Length=357, Percent_Identity=26.890756302521, Blast_Score=104, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_SYMTH (Q67NL0)
Other databases:
- EMBL: AP006840 - RefSeq: YP_075577.1 - HSSP: P23367 - ProteinModelPortal: Q67NL0 - SMR: Q67NL0 - GeneID: 2979721 - GenomeReviews: AP006840_GR - KEGG: sth:STH1748 - NMPDR: fig|292459.1.peg.1686 - HOGENOM: HBG520262 - OMA: FLFINNR - BioCyc: STHE292459:STH1748-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR008207 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - Gene3D: G3DSA:1.20.120.160 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 68300; Mature: 68168
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIRLLDERTANQIAAGEVVERPASVVKELVENALDAQAKRIVVEVSGGGRELVRVTDD CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECC GIGMVPEDARLALQRHATSKIRTAEDLNAITTLGFRGEALPSIAAVSQFELITRPHDQLA CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHC GYRILAEGGQIVAEGEHGCPAGTRVTVRDLFFNVPARLKYLKTNATELAQIGDILTRLAL CEEEEECCCEEEEECCCCCCCCCEEEHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHH ANPEVAFRFQSGQAQVFATPGTGDLTAAVAALLGREMAKELLPVDYRNDAARVHGFVGRP CCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCC TIARAGRSHQYFFVNRRAVRTIAARYALEEAYAHLLPNGRYPVCILFIEVEPHEVDVNVH HHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEC PTKAEVRFQRDREVRAAVYQAARHALGAALLIPGTEVTADGEVRVPDRAEEKAALQRGWV CCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEECCCCCEECCCCHHHHHHHHHCCC PPGAGRPGEGGGRAAPPPWRVSAGGPGGQTTAREPVQAYLPAGGLQAALAQRAAEEAAAA CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH VPAVDLAEATLVPRSAEPGELIRALRPLGQVHRSYIACDGPEGLYLIDQHAAHERIFFER CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCHHHHHHHHH LYAAAQEQATAVQRLLFPLTLDLTPAQMAIWQENAAIFAESGFEAEPFGGNTLLIHGVPA HHHHHHHHHHHHHHHHHHHEECCCHHHHHHEECCCEEEECCCCCCCCCCCCEEEEEECCC GLGTDHVARLVCDFLDRLQEDQVAPGTPVTDRRRRVLAAMAACKAAIKARDPLQPEDIAA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LLSDLAACASPETCPHGRPTVICVSISELEKRFKR HHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHCC >Mature Secondary Structure ARIRLLDERTANQIAAGEVVERPASVVKELVENALDAQAKRIVVEVSGGGRELVRVTDD CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECC GIGMVPEDARLALQRHATSKIRTAEDLNAITTLGFRGEALPSIAAVSQFELITRPHDQLA CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHC GYRILAEGGQIVAEGEHGCPAGTRVTVRDLFFNVPARLKYLKTNATELAQIGDILTRLAL CEEEEECCCEEEEECCCCCCCCCEEEHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHH ANPEVAFRFQSGQAQVFATPGTGDLTAAVAALLGREMAKELLPVDYRNDAARVHGFVGRP CCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCC TIARAGRSHQYFFVNRRAVRTIAARYALEEAYAHLLPNGRYPVCILFIEVEPHEVDVNVH HHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEEEEEEC PTKAEVRFQRDREVRAAVYQAARHALGAALLIPGTEVTADGEVRVPDRAEEKAALQRGWV CCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEECCCCCEECCCCHHHHHHHHHCCC PPGAGRPGEGGGRAAPPPWRVSAGGPGGQTTAREPVQAYLPAGGLQAALAQRAAEEAAAA CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH VPAVDLAEATLVPRSAEPGELIRALRPLGQVHRSYIACDGPEGLYLIDQHAAHERIFFER CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCHHHHHHHHH LYAAAQEQATAVQRLLFPLTLDLTPAQMAIWQENAAIFAESGFEAEPFGGNTLLIHGVPA HHHHHHHHHHHHHHHHHHHEECCCHHHHHHEECCCEEEECCCCCCCCCCCCEEEEEECCC GLGTDHVARLVCDFLDRLQEDQVAPGTPVTDRRRRVLAAMAACKAAIKARDPLQPEDIAA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LLSDLAACASPETCPHGRPTVICVSISELEKRFKR HHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA