Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892875

Identifier: 51892875

GI number: 51892875

Start: 1885572

End: 1886060

Strand: Reverse

Name: 51892875

Synonym: STH1737

Alternate gene names: NA

Gene position: 1886060-1885572 (Counterclockwise)

Preceding gene: 51892876

Following gene: 51892873

Centisome position: 52.89

GC content: 70.55

Gene sequence:

>489_bases
GTGATGGGCTGGCAGTGGATTGCGTTCGCGATCGCCGTCGTCGTGATGCTGGCGGGCGTGGTCGGCACGCTGATCCCGGC
GCTGCCGGGGCTGCCGATCGTGTTCCTGGCGATGCTGGGCTACGCCGTCGTCGACGGCTTTCGCGACATTACGCCCGGTT
TCCTGGCCGTGGCCCTGCTGGTCGTGGCGGCGACCCAGGTGGCGGAGCACTACGCGCGCGCCTGGGGAGCCAAGCGTTTC
GGCGCCGGCCGTGCCGGTGCATGGGGCGCCGTGATCGGCTCCATCGTCGGGCTGTTCTTCATGCCCCTGGGGCTGCTGCT
CGGCCCGTTCCTCGGGGCGCTGCTGTTTGAGCTGGTCGCCGGCCGGTCGGGGAGCGAGGCGGTGAAGGCGGGCTTCGGCG
GCCTGGTCGGCGTGCTGGGGTCGGTGGTGGTCAACGTGGTGGTCGCCCTGGGACTCACCGTCGCCTTTGTGGCCAAGGTC
CTGATATAG

Upstream 100 bases:

>100_bases
TTTTCAGGGGGGTCTTACGCGGGAGCACGTCATGCTGGCCGCCCTCCGGGCCGCAAGCGATCTGGCGGCCGCCGGAATCC
TTACGGTGTAGGGGAGTGGT

Downstream 100 bases:

>100_bases
GCCCACCGCAACGAAATGAGCCCTGTGTGAGCCTTGCGCTCGCACAGGGCTTTCCTGCTTTCCTGCTTTCCTGCCTAGCC
CATCCGGCGGACCAGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MMGWQWIAFAIAVVVMLAGVVGTLIPALPGLPIVFLAMLGYAVVDGFRDITPGFLAVALLVVAATQVAEHYARAWGAKRF
GAGRAGAWGAVIGSIVGLFFMPLGLLLGPFLGALLFELVAGRSGSEAVKAGFGGLVGVLGSVVVNVVVALGLTVAFVAKV
LI

Sequences:

>Translated_162_residues
MMGWQWIAFAIAVVVMLAGVVGTLIPALPGLPIVFLAMLGYAVVDGFRDITPGFLAVALLVVAATQVAEHYARAWGAKRF
GAGRAGAWGAVIGSIVGLFFMPLGLLLGPFLGALLFELVAGRSGSEAVKAGFGGLVGVLGSVVVNVVVALGLTVAFVAKV
LI
>Mature_162_residues
MMGWQWIAFAIAVVVMLAGVVGTLIPALPGLPIVFLAMLGYAVVDGFRDITPGFLAVALLVVAATQVAEHYARAWGAKRF
GAGRAGAWGAVIGSIVGLFFMPLGLLLGPFLGALLFELVAGRSGSEAVKAGFGGLVGVLGSVVVNVVVALGLTVAFVAKV
LI

Specific function: Unknown

COG id: COG2839

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16449; Mature: 16449

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGWQWIAFAIAVVVMLAGVVGTLIPALPGLPIVFLAMLGYAVVDGFRDITPGFLAVALL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VVAATQVAEHYARAWGAKRFGAGRAGAWGAVIGSIVGLFFMPLGLLLGPFLGALLFELVA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRSGSEAVKAGFGGLVGVLGSVVVNVVVALGLTVAFVAKVLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MMGWQWIAFAIAVVVMLAGVVGTLIPALPGLPIVFLAMLGYAVVDGFRDITPGFLAVALL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VVAATQVAEHYARAWGAKRFGAGRAGAWGAVIGSIVGLFFMPLGLLLGPFLGALLFELVA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRSGSEAVKAGFGGLVGVLGSVVVNVVVALGLTVAFVAKVLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA