Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892872

Identifier: 51892872

GI number: 51892872

Start: 1883971

End: 1884291

Strand: Reverse

Name: 51892872

Synonym: STH1734

Alternate gene names: NA

Gene position: 1884291-1883971 (Counterclockwise)

Preceding gene: 51892873

Following gene: 51892871

Centisome position: 52.84

GC content: 73.52

Gene sequence:

>321_bases
ATGGGGGTCGTGGTCCAGAGCTTCGACGGCCGCATGCCCGGCGACCTGTATGAACGGCTCGTGCGGCTGCGCCGGCGCCA
CCGCACGGTGCTGCAGGCCGCGGCGGCCGGCGACTTCTCGAACGAGGCGGAACTGCATGCCCTGAGTCGGCGGCTGGGGC
GCATGCTGGCCGAGACGGCGCGCATGCCCGTGGAGCAGCGGGGCGGCCTGCGCATGTTGGAGATCTCCCTGGCGGTCGAC
CGCATGTTCCCCGAGCTGCGGGCATGGAACCAGCAGGCGGCATTCCGGTACCCGCCCGCGGGCAGGGCCGCCGGCCGCTG
A

Upstream 100 bases:

>100_bases
CTACGAGATCCAGCGCCTCAACGGCCTGCCGTCCGCGGAGATCTACCCGGGCCAGGTGCTGTTTGTCCCGACCGAGTCGC
GGTGAGGGGAGGGGCCGGAA

Downstream 100 bases:

>100_bases
CCGGCGTGACGGGCGGCGAGGGGCCATCGCATCGGAAGATATCGGGTCTGCGCCTGAGGGGTGCAGGCCCGCTCTTGTCT
GGCAGTTCCGATGGAGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MGVVVQSFDGRMPGDLYERLVRLRRRHRTVLQAAAAGDFSNEAELHALSRRLGRMLAETARMPVEQRGGLRMLEISLAVD
RMFPELRAWNQQAAFRYPPAGRAAGR

Sequences:

>Translated_106_residues
MGVVVQSFDGRMPGDLYERLVRLRRRHRTVLQAAAAGDFSNEAELHALSRRLGRMLAETARMPVEQRGGLRMLEISLAVD
RMFPELRAWNQQAAFRYPPAGRAAGR
>Mature_105_residues
GVVVQSFDGRMPGDLYERLVRLRRRHRTVLQAAAAGDFSNEAELHALSRRLGRMLAETARMPVEQRGGLRMLEISLAVDR
MFPELRAWNQQAAFRYPPAGRAAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12006; Mature: 11875

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVVVQSFDGRMPGDLYERLVRLRRRHRTVLQAAAAGDFSNEAELHALSRRLGRMLAETA
CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RMPVEQRGGLRMLEISLAVDRMFPELRAWNQQAAFRYPPAGRAAGR
HCCHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCC
>Mature Secondary Structure 
GVVVQSFDGRMPGDLYERLVRLRRRHRTVLQAAAAGDFSNEAELHALSRRLGRMLAETA
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
RMPVEQRGGLRMLEISLAVDRMFPELRAWNQQAAFRYPPAGRAAGR
HCCHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA