| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892777
Identifier: 51892777
GI number: 51892777
Start: 1783374
End: 1784114
Strand: Reverse
Name: 51892777
Synonym: STH1639
Alternate gene names: NA
Gene position: 1784114-1783374 (Counterclockwise)
Preceding gene: 51892778
Following gene: 51892774
Centisome position: 50.03
GC content: 76.92
Gene sequence:
>741_bases GTGCGCCGCCTGGCCAGGTCCTTCCGAAGCGCCGGCGGCCCGCAGCAGAATCCCGCCGGGTCGCAGGCCCCGGCTCAGCA GCCCGGCGGTCCCCAGGACGCACCCCCGCAGGGCCGCGACCAGGCGTACCTGGAGCCGCAGGGGGCACAGCAGCCGCCCT GGCTGCCCTCGCTGAACGGGGAGACGGCTGCATCGATGCTGACCGCCCTGCGCGCCGCCAAGCAGCAGCTGGTGCAGGAA CTGGAGGCTAACCTGAAGCAGCTGAAGGCAGTGCTGGAGGAGACCCACCGCATCCAGAAGCAGATGGAGGCGGTGCTCAT GGAGGCGCGCGCGGAGATCGGCCTGCAGCAGCGCGCCGGCGGCCACGGCCAGGACCAGCAGCCCCAACGGCAGCAGCAGC CGCAGGCGCGCCAGCCGCAGGCATGGGGGCAGATGCAACAGCCGCAGCAGTTGCAGCAGCCGCAGGCACAGGGGCAACCG CCGGCACAGGGGCACCTGCAGCAGCCGCAGGGGCACGGAGAGCCGCAGCCGCCGCAGGCACCGGGACACGGCCGGCCGCA ACAGCCCCAGGCGCCGTCCGCCGGGGCGACAGGCGGTCCCCGGGGCGCCCAGCCGCCGAGCCCGGGCGCGCCGGGCCCGC GGCGGCCCCGGCCGCCACTCTCCTCCGACCCGCCGCCGCCCTGGGAGCCGCCGGAGCCCGCGTCCGAGCCGGGCTGGTCG CCCTGGCAGCCCCCGGTGTAG
Upstream 100 bases:
>100_bases CCGGGAAAGGCAGTACAGGCCGCCCGACATCTCATCCTGAAAAGCGAATCTCGGAGTCTGAGGAGGCGGTCACGTGCAGA ACAACCCTCGTCCGCGGCCG
Downstream 100 bases:
>100_bases CGCCGGCCGCGCGCAGAAGCGGCGCCCGCAGGCGCCGCTTTCGCAGTGTTGGCTATGCGGTTTCCGGCAAGGGGGGGCCC TGCACGGGCGGCAGCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MRRLARSFRSAGGPQQNPAGSQAPAQQPGGPQDAPPQGRDQAYLEPQGAQQPPWLPSLNGETAASMLTALRAAKQQLVQE LEANLKQLKAVLEETHRIQKQMEAVLMEARAEIGLQQRAGGHGQDQQPQRQQQPQARQPQAWGQMQQPQQLQQPQAQGQP PAQGHLQQPQGHGEPQPPQAPGHGRPQQPQAPSAGATGGPRGAQPPSPGAPGPRRPRPPLSSDPPPPWEPPEPASEPGWS PWQPPV
Sequences:
>Translated_246_residues MRRLARSFRSAGGPQQNPAGSQAPAQQPGGPQDAPPQGRDQAYLEPQGAQQPPWLPSLNGETAASMLTALRAAKQQLVQE LEANLKQLKAVLEETHRIQKQMEAVLMEARAEIGLQQRAGGHGQDQQPQRQQQPQARQPQAWGQMQQPQQLQQPQAQGQP PAQGHLQQPQGHGEPQPPQAPGHGRPQQPQAPSAGATGGPRGAQPPSPGAPGPRRPRPPLSSDPPPPWEPPEPASEPGWS PWQPPV >Mature_246_residues MRRLARSFRSAGGPQQNPAGSQAPAQQPGGPQDAPPQGRDQAYLEPQGAQQPPWLPSLNGETAASMLTALRAAKQQLVQE LEANLKQLKAVLEETHRIQKQMEAVLMEARAEIGLQQRAGGHGQDQQPQRQQQPQARQPQAWGQMQQPQQLQQPQAQGQP PAQGHLQQPQGHGEPQPPQAPGHGRPQQPQAPSAGATGGPRGAQPPSPGAPGPRRPRPPLSSDPPPPWEPPEPASEPGWS PWQPPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26380; Mature: 26380
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLARSFRSAGGPQQNPAGSQAPAQQPGGPQDAPPQGRDQAYLEPQGAQQPPWLPSLNG CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC ETAASMLTALRAAKQQLVQELEANLKQLKAVLEETHRIQKQMEAVLMEARAEIGLQQRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GHGQDQQPQRQQQPQARQPQAWGQMQQPQQLQQPQAQGQPPAQGHLQQPQGHGEPQPPQA CCCCCCCCHHHHCCCCCCCHHHHHHCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCC PGHGRPQQPQAPSAGATGGPRGAQPPSPGAPGPRRPRPPLSSDPPPPWEPPEPASEPGWS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PWQPPV CCCCCC >Mature Secondary Structure MRRLARSFRSAGGPQQNPAGSQAPAQQPGGPQDAPPQGRDQAYLEPQGAQQPPWLPSLNG CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC ETAASMLTALRAAKQQLVQELEANLKQLKAVLEETHRIQKQMEAVLMEARAEIGLQQRAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GHGQDQQPQRQQQPQARQPQAWGQMQQPQQLQQPQAQGQPPAQGHLQQPQGHGEPQPPQA CCCCCCCCHHHHCCCCCCCHHHHHHCCHHHHHCHHHCCCCCCCCCCCCCCCCCCCCCCCC PGHGRPQQPQAPSAGATGGPRGAQPPSPGAPGPRRPRPPLSSDPPPPWEPPEPASEPGWS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PWQPPV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA