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The map label for this gene is per1 [H]

Identifier: 51892706

GI number: 51892706

Start: 1706056

End: 1706841

Strand: Reverse

Name: per1 [H]

Synonym: STH1568

Alternate gene names: 51892706

Gene position: 1706841-1706056 (Counterclockwise)

Preceding gene: 51892707

Following gene: 51892704

Centisome position: 47.86

GC content: 67.56

Gene sequence:

>786_bases
ATGCCGAGACTCAGACCGTTCCGGCCGGAGGACCTGACGGCCATCCTGGAGAGGGTCGTCAGCGACCTGCCCGGCACCAT
CGGCGTCTACGTGACCGACCTGGCGACGGGCCGCTCGGCCGGCCTCAACCCGATGGCGGAGTTCTACGCTGCGAGCACCA
TCAAGGTGCCCATCGCCATGGCCGTCCTCTGGCTGGCTGACCGGCGGCGGATCAGCCTGGACCAGACCATCGCCTACCAG
CCCGAGGACTACCAGGCGGGGACCGGCATCCTGCAGGCCACGATCCAGCCCGGAGACGAGGTCTCCGTCCGACGGCTGCT
GGAGCTCACGATCACGGTCTCGGACAACATCGCCCGCAACATGCTGGAGCGGTTCATCGGCAGCGGGACCATCCGCAATT
ACATGCTGTCCCTGGGCGTGGCCCCGGCGTACGACCCGCTGGAGACCCCGGTCACCCCCTACGGCATGAATCAGGTGCTG
ATCGCCCTGGACTCCGGCCGGTCCGGCCTCTCGCCGGCGTCGACCCGCATGCTGCTCCGGTGGATGGAAGAGGCGGTCTT
CCGCAGGCGCATCCCGCGATATCTTCCGGAATCGGCGGTGGTGGCCACCAAGATCGGCAGCCGGGACGACGAGTTCCACG
ACGTCGGACTGGTCTATGCCCCGGACCGCTCTTTCGCCATCTCGGTGTTCACCAAGGGGATGACGGAGGCGCAGGCCGAG
GAAGCCATCGCCCGCATCGCCGAGGCCGTGTACTGGTACATGGACTCGCTCACCCGACCGGGATAA

Upstream 100 bases:

>100_bases
TCACCGACGAGTCTGACTTCACCATCCAGTAGCCGCCATCGTCCCGCCCCGCCGGCGTATACTGCTGTGACGCGACCTGG
CGGACGGAGGGATGGAGCGC

Downstream 100 bases:

>100_bases
TCAGCCTTCTCCCACCTGTTGTGTGATCCTGGCAACCCGAATTTGTGCGCCGCCCTCCCCCGGCCCGCAACCGGGGGAGG
GCGGATCTTGTTGGCGCCTA

Product: putative beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MPRLRPFRPEDLTAILERVVSDLPGTIGVYVTDLATGRSAGLNPMAEFYAASTIKVPIAMAVLWLADRRRISLDQTIAYQ
PEDYQAGTGILQATIQPGDEVSVRRLLELTITVSDNIARNMLERFIGSGTIRNYMLSLGVAPAYDPLETPVTPYGMNQVL
IALDSGRSGLSPASTRMLLRWMEEAVFRRRIPRYLPESAVVATKIGSRDDEFHDVGLVYAPDRSFAISVFTKGMTEAQAE
EAIARIAEAVYWYMDSLTRPG

Sequences:

>Translated_261_residues
MPRLRPFRPEDLTAILERVVSDLPGTIGVYVTDLATGRSAGLNPMAEFYAASTIKVPIAMAVLWLADRRRISLDQTIAYQ
PEDYQAGTGILQATIQPGDEVSVRRLLELTITVSDNIARNMLERFIGSGTIRNYMLSLGVAPAYDPLETPVTPYGMNQVL
IALDSGRSGLSPASTRMLLRWMEEAVFRRRIPRYLPESAVVATKIGSRDDEFHDVGLVYAPDRSFAISVFTKGMTEAQAE
EAIARIAEAVYWYMDSLTRPG
>Mature_260_residues
PRLRPFRPEDLTAILERVVSDLPGTIGVYVTDLATGRSAGLNPMAEFYAASTIKVPIAMAVLWLADRRRISLDQTIAYQP
EDYQAGTGILQATIQPGDEVSVRRLLELTITVSDNIARNMLERFIGSGTIRNYMLSLGVAPAYDPLETPVTPYGMNQVLI
ALDSGRSGLSPASTRMLLRWMEEAVFRRRIPRYLPESAVVATKIGSRDDEFHDVGLVYAPDRSFAISVFTKGMTEAQAEE
AIARIAEAVYWYMDSLTRPG

Specific function: Unknown

COG id: COG2367

COG function: function code V; Beta-lactamase class A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-A beta-lactamase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR000871 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.2.6 [H]

Molecular weight: Translated: 28905; Mature: 28773

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLRPFRPEDLTAILERVVSDLPGTIGVYVTDLATGRSAGLNPMAEFYAASTIKVPIAM
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
AVLWLADRRRISLDQTIAYQPEDYQAGTGILQATIQPGDEVSVRRLLELTITVSDNIARN
HHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHEEEECHHHHHH
MLERFIGSGTIRNYMLSLGVAPAYDPLETPVTPYGMNQVLIALDSGRSGLSPASTRMLLR
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
WMEEAVFRRRIPRYLPESAVVATKIGSRDDEFHDVGLVYAPDRSFAISVFTKGMTEAQAE
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHCCCEEEECCCCEEEEEHHCCCHHHHHH
EAIARIAEAVYWYMDSLTRPG
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PRLRPFRPEDLTAILERVVSDLPGTIGVYVTDLATGRSAGLNPMAEFYAASTIKVPIAM
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
AVLWLADRRRISLDQTIAYQPEDYQAGTGILQATIQPGDEVSVRRLLELTITVSDNIARN
HHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHEEEECHHHHHH
MLERFIGSGTIRNYMLSLGVAPAYDPLETPVTPYGMNQVLIALDSGRSGLSPASTRMLLR
HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
WMEEAVFRRRIPRYLPESAVVATKIGSRDDEFHDVGLVYAPDRSFAISVFTKGMTEAQAE
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHCCCEEEECCCCEEEEEHHCCCHHHHHH
EAIARIAEAVYWYMDSLTRPG
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8141562 [H]