| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892704
Identifier: 51892704
GI number: 51892704
Start: 1703315
End: 1703761
Strand: Reverse
Name: 51892704
Synonym: STH1566
Alternate gene names: NA
Gene position: 1703761-1703315 (Counterclockwise)
Preceding gene: 51892706
Following gene: 51892701
Centisome position: 47.78
GC content: 66.44
Gene sequence:
>447_bases ATGATCCCCATCGTGTTCACCTTCCTGCGGATCACCATTCCGCCGTTCTTCACCGCCACCTTGATGTCACATGTGCCCAG CATGCTGGCGATGCTCATGGGGCCCTTTGCCGCCATCGGAGTGGGCATCGGCTCAGCGCTGGGATTCACCATTTTCGTCG GCCCGCCCATCGGCGCACGAGCCCTGTCGCACGCCCTGTTCGCCTGGGTGGGCAACATCGCCTGGAACCGGGGCATGCCC CTCTGGCTGGTGATGCTCATCGCCCTGCCCGTCCACGCCGTCGTCGAGGCGGCGGTGGTCTGGCTCCTGGGCGGAAACCT GAGCATGGCCCTGATCACCCTGGTGGGCACGGCCATCCACCATTGCGTGGACGGGGGAATCGCCCTGGGACTGGTGGCTG CCCTAGGACGGACCGGCGTCCGCTGGTTCGAGCAGCCCGCGCAATGA
Upstream 100 bases:
>100_bases AGAACCCGGTCGACACGGTACAGAAAGGGTGGGTCCCGTGCGGCGCCGCATCGGTATCGGGGATCTCGCTGCCACAGGCA TTCTCACTGCCCTGGCCCTC
Downstream 100 bases:
>100_bases CAGCGCAAGTCCCCGTCGGTCGCGACGGGGACTTGCTGCTGCCTCCGGGTAGCGTCTGCACCGGGGCGCACTCCACTCTC CCGCCCCAGGTACGGTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MIPIVFTFLRITIPPFFTATLMSHVPSMLAMLMGPFAAIGVGIGSALGFTIFVGPPIGARALSHALFAWVGNIAWNRGMP LWLVMLIALPVHAVVEAAVVWLLGGNLSMALITLVGTAIHHCVDGGIALGLVAALGRTGVRWFEQPAQ
Sequences:
>Translated_148_residues MIPIVFTFLRITIPPFFTATLMSHVPSMLAMLMGPFAAIGVGIGSALGFTIFVGPPIGARALSHALFAWVGNIAWNRGMP LWLVMLIALPVHAVVEAAVVWLLGGNLSMALITLVGTAIHHCVDGGIALGLVAALGRTGVRWFEQPAQ >Mature_148_residues MIPIVFTFLRITIPPFFTATLMSHVPSMLAMLMGPFAAIGVGIGSALGFTIFVGPPIGARALSHALFAWVGNIAWNRGMP LWLVMLIALPVHAVVEAAVVWLLGGNLSMALITLVGTAIHHCVDGGIALGLVAALGRTGVRWFEQPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15580; Mature: 15580
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPIVFTFLRITIPPFFTATLMSHVPSMLAMLMGPFAAIGVGIGSALGFTIFVGPPIGAR CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHH ALSHALFAWVGNIAWNRGMPLWLVMLIALPVHAVVEAAVVWLLGGNLSMALITLVGTAIH HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH HCVDGGIALGLVAALGRTGVRWFEQPAQ HHHCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIPIVFTFLRITIPPFFTATLMSHVPSMLAMLMGPFAAIGVGIGSALGFTIFVGPPIGAR CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHH ALSHALFAWVGNIAWNRGMPLWLVMLIALPVHAVVEAAVVWLLGGNLSMALITLVGTAIH HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH HCVDGGIALGLVAALGRTGVRWFEQPAQ HHHCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA