Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892704

Identifier: 51892704

GI number: 51892704

Start: 1703315

End: 1703761

Strand: Reverse

Name: 51892704

Synonym: STH1566

Alternate gene names: NA

Gene position: 1703761-1703315 (Counterclockwise)

Preceding gene: 51892706

Following gene: 51892701

Centisome position: 47.78

GC content: 66.44

Gene sequence:

>447_bases
ATGATCCCCATCGTGTTCACCTTCCTGCGGATCACCATTCCGCCGTTCTTCACCGCCACCTTGATGTCACATGTGCCCAG
CATGCTGGCGATGCTCATGGGGCCCTTTGCCGCCATCGGAGTGGGCATCGGCTCAGCGCTGGGATTCACCATTTTCGTCG
GCCCGCCCATCGGCGCACGAGCCCTGTCGCACGCCCTGTTCGCCTGGGTGGGCAACATCGCCTGGAACCGGGGCATGCCC
CTCTGGCTGGTGATGCTCATCGCCCTGCCCGTCCACGCCGTCGTCGAGGCGGCGGTGGTCTGGCTCCTGGGCGGAAACCT
GAGCATGGCCCTGATCACCCTGGTGGGCACGGCCATCCACCATTGCGTGGACGGGGGAATCGCCCTGGGACTGGTGGCTG
CCCTAGGACGGACCGGCGTCCGCTGGTTCGAGCAGCCCGCGCAATGA

Upstream 100 bases:

>100_bases
AGAACCCGGTCGACACGGTACAGAAAGGGTGGGTCCCGTGCGGCGCCGCATCGGTATCGGGGATCTCGCTGCCACAGGCA
TTCTCACTGCCCTGGCCCTC

Downstream 100 bases:

>100_bases
CAGCGCAAGTCCCCGTCGGTCGCGACGGGGACTTGCTGCTGCCTCCGGGTAGCGTCTGCACCGGGGCGCACTCCACTCTC
CCGCCCCAGGTACGGTCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MIPIVFTFLRITIPPFFTATLMSHVPSMLAMLMGPFAAIGVGIGSALGFTIFVGPPIGARALSHALFAWVGNIAWNRGMP
LWLVMLIALPVHAVVEAAVVWLLGGNLSMALITLVGTAIHHCVDGGIALGLVAALGRTGVRWFEQPAQ

Sequences:

>Translated_148_residues
MIPIVFTFLRITIPPFFTATLMSHVPSMLAMLMGPFAAIGVGIGSALGFTIFVGPPIGARALSHALFAWVGNIAWNRGMP
LWLVMLIALPVHAVVEAAVVWLLGGNLSMALITLVGTAIHHCVDGGIALGLVAALGRTGVRWFEQPAQ
>Mature_148_residues
MIPIVFTFLRITIPPFFTATLMSHVPSMLAMLMGPFAAIGVGIGSALGFTIFVGPPIGARALSHALFAWVGNIAWNRGMP
LWLVMLIALPVHAVVEAAVVWLLGGNLSMALITLVGTAIHHCVDGGIALGLVAALGRTGVRWFEQPAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15580; Mature: 15580

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPIVFTFLRITIPPFFTATLMSHVPSMLAMLMGPFAAIGVGIGSALGFTIFVGPPIGAR
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHH
ALSHALFAWVGNIAWNRGMPLWLVMLIALPVHAVVEAAVVWLLGGNLSMALITLVGTAIH
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
HCVDGGIALGLVAALGRTGVRWFEQPAQ
HHHCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIPIVFTFLRITIPPFFTATLMSHVPSMLAMLMGPFAAIGVGIGSALGFTIFVGPPIGAR
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHH
ALSHALFAWVGNIAWNRGMPLWLVMLIALPVHAVVEAAVVWLLGGNLSMALITLVGTAIH
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
HCVDGGIALGLVAALGRTGVRWFEQPAQ
HHHCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA