Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892701

Identifier: 51892701

GI number: 51892701

Start: 1699753

End: 1700175

Strand: Reverse

Name: 51892701

Synonym: STH1563

Alternate gene names: NA

Gene position: 1700175-1699753 (Counterclockwise)

Preceding gene: 51892704

Following gene: 51892700

Centisome position: 47.68

GC content: 68.32

Gene sequence:

>423_bases
GTGCCCGGATGCCGGCACCACCTCCTCCGCAGGCTCGGTTCTGCGGCCATCCCGTCGCAGGCCCGGACATGCCCCGCCCG
GAACAGCCGACGGACCCGGCACAGAGGAGTCGCACCGGGATCGTATGCGGAGCCGTCAAAGAGGCCGAAGCGTCACCCTT
GCGCGGCTTCCCCTAATCGCCGTCAGCAGAAAGGAGGCAGAGTCGTGCGGAAACGGACCCGAGGCAAGTGGCTCCTCCTC
AGCTTGACTGCCGTCACTGCGGTCGTGTTCTTGGCCCATTGCTCCCCATCGCGGGAGGCTGAAGTGGCCGCGCGGTGGAC
GACGGACGACGTGCAGCGGATCACCATCGACGTCCCCCGCCCGTGCAGGCCGCTCAGCGTGGACGAGTTCGTGTGCGACG
AGGTGATCCTGAGGCGGCCCTGA

Upstream 100 bases:

>100_bases
GGCGGACGGCGGAATGCTTGTCCCGCCGAACTCTCGGCCAGTCTCAAATCCTGAGCAGCAGGTCCAGTCCCGTACCCATC
CTCAGAGCCGGCGAACCCCT

Downstream 100 bases:

>100_bases
CGGGGACCGCGGCCCCCCCTCGGACAGCCCCCTCAGGTCACGTAATGGCAGGAGTCAATCTGCTATTTTCTTCCGGGCAA
GGAGGATATTGCTGTTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MPGCRHHLLRRLGSAAIPSQARTCPARNSRRTRHRGVAPGSYAEPSKRPKRHPCAASPNRRQQKGGRVVRKRTRGKWLLL
SLTAVTAVVFLAHCSPSREAEVAARWTTDDVQRITIDVPRPCRPLSVDEFVCDEVILRRP

Sequences:

>Translated_140_residues
MPGCRHHLLRRLGSAAIPSQARTCPARNSRRTRHRGVAPGSYAEPSKRPKRHPCAASPNRRQQKGGRVVRKRTRGKWLLL
SLTAVTAVVFLAHCSPSREAEVAARWTTDDVQRITIDVPRPCRPLSVDEFVCDEVILRRP
>Mature_139_residues
PGCRHHLLRRLGSAAIPSQARTCPARNSRRTRHRGVAPGSYAEPSKRPKRHPCAASPNRRQQKGGRVVRKRTRGKWLLLS
LTAVTAVVFLAHCSPSREAEVAARWTTDDVQRITIDVPRPCRPLSVDEFVCDEVILRRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15745; Mature: 15614

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGCRHHLLRRLGSAAIPSQARTCPARNSRRTRHRGVAPGSYAEPSKRPKRHPCAASPNR
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
RQQKGGRVVRKRTRGKWLLLSLTAVTAVVFLAHCSPSREAEVAARWTTDDVQRITIDVPR
HHHHCCHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCC
PCRPLSVDEFVCDEVILRRP
CCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PGCRHHLLRRLGSAAIPSQARTCPARNSRRTRHRGVAPGSYAEPSKRPKRHPCAASPNR
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
RQQKGGRVVRKRTRGKWLLLSLTAVTAVVFLAHCSPSREAEVAARWTTDDVQRITIDVPR
HHHHCCHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCC
PCRPLSVDEFVCDEVILRRP
CCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA