| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892701
Identifier: 51892701
GI number: 51892701
Start: 1699753
End: 1700175
Strand: Reverse
Name: 51892701
Synonym: STH1563
Alternate gene names: NA
Gene position: 1700175-1699753 (Counterclockwise)
Preceding gene: 51892704
Following gene: 51892700
Centisome position: 47.68
GC content: 68.32
Gene sequence:
>423_bases GTGCCCGGATGCCGGCACCACCTCCTCCGCAGGCTCGGTTCTGCGGCCATCCCGTCGCAGGCCCGGACATGCCCCGCCCG GAACAGCCGACGGACCCGGCACAGAGGAGTCGCACCGGGATCGTATGCGGAGCCGTCAAAGAGGCCGAAGCGTCACCCTT GCGCGGCTTCCCCTAATCGCCGTCAGCAGAAAGGAGGCAGAGTCGTGCGGAAACGGACCCGAGGCAAGTGGCTCCTCCTC AGCTTGACTGCCGTCACTGCGGTCGTGTTCTTGGCCCATTGCTCCCCATCGCGGGAGGCTGAAGTGGCCGCGCGGTGGAC GACGGACGACGTGCAGCGGATCACCATCGACGTCCCCCGCCCGTGCAGGCCGCTCAGCGTGGACGAGTTCGTGTGCGACG AGGTGATCCTGAGGCGGCCCTGA
Upstream 100 bases:
>100_bases GGCGGACGGCGGAATGCTTGTCCCGCCGAACTCTCGGCCAGTCTCAAATCCTGAGCAGCAGGTCCAGTCCCGTACCCATC CTCAGAGCCGGCGAACCCCT
Downstream 100 bases:
>100_bases CGGGGACCGCGGCCCCCCCTCGGACAGCCCCCTCAGGTCACGTAATGGCAGGAGTCAATCTGCTATTTTCTTCCGGGCAA GGAGGATATTGCTGTTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPGCRHHLLRRLGSAAIPSQARTCPARNSRRTRHRGVAPGSYAEPSKRPKRHPCAASPNRRQQKGGRVVRKRTRGKWLLL SLTAVTAVVFLAHCSPSREAEVAARWTTDDVQRITIDVPRPCRPLSVDEFVCDEVILRRP
Sequences:
>Translated_140_residues MPGCRHHLLRRLGSAAIPSQARTCPARNSRRTRHRGVAPGSYAEPSKRPKRHPCAASPNRRQQKGGRVVRKRTRGKWLLL SLTAVTAVVFLAHCSPSREAEVAARWTTDDVQRITIDVPRPCRPLSVDEFVCDEVILRRP >Mature_139_residues PGCRHHLLRRLGSAAIPSQARTCPARNSRRTRHRGVAPGSYAEPSKRPKRHPCAASPNRRQQKGGRVVRKRTRGKWLLLS LTAVTAVVFLAHCSPSREAEVAARWTTDDVQRITIDVPRPCRPLSVDEFVCDEVILRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15745; Mature: 15614
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGCRHHLLRRLGSAAIPSQARTCPARNSRRTRHRGVAPGSYAEPSKRPKRHPCAASPNR CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCH RQQKGGRVVRKRTRGKWLLLSLTAVTAVVFLAHCSPSREAEVAARWTTDDVQRITIDVPR HHHHCCHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCC PCRPLSVDEFVCDEVILRRP CCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure PGCRHHLLRRLGSAAIPSQARTCPARNSRRTRHRGVAPGSYAEPSKRPKRHPCAASPNR CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCH RQQKGGRVVRKRTRGKWLLLSLTAVTAVVFLAHCSPSREAEVAARWTTDDVQRITIDVPR HHHHCCHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCC PCRPLSVDEFVCDEVILRRP CCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA